; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0069941 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0069941
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr03:15524282..15525175
RNA-Seq ExpressionCmc03g0069941
SyntenyCmc03g0069941
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033024.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-14084.51Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MKDL NAQYVLG QIV NRKNK LAMSQTSYI KMLSRYK+QNSK+GLL YRYGIHLSKEQCPKT QEVEDM+NIPYAS   SLMYAMLCTR DICYSV 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVSRYQSNPGRDHWT +KNIL+YL+RTKDYMLVYGS+DLILTGY +SDFQTD+DARKSTSR+VFTLN GAV WRSIKQ CITDS +EA+YV ACE AKE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL
        VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK+GKHIE+K+HLIREIVHRG+VT+TKI  EQNMADPFTKALT KVFESHLHGLGL  L
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL

KAA0052272.1 gag/pol protein [Cucumis melo var. makuwa]9.6e-14284.93Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MKDL NAQYVLGI+IV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKEQCPKT QEV+DM+NIPYASAVGSLMYAMLCTRPDICYSVG
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVSRYQSNPG DHWT +KNIL+YL+RTKDYMLVYGSKDLILT Y DSDFQ+D+D RKSTS +VFTLNG AVVW+ IKQ CI DSTMEAEYVA+CE AKE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGL
        VWLKKFL  LE+VPN+HLPITLYCDNSGAVANS+EPRSHKR KHIERKYHLIREI+HRG+VT+TKI SEQN+ DPFTKALTAKVFESHLH L
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGL

KAA0058854.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-14184.51Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MK L NA YVL IQIV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKEQCPKT QEVEDM+NIPYA A+GSLMYAMLC RPDICYSV 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVS YQSNPGRDHWT +KNI++YL+RTKDYM VYGSKDLILT Y DSDFQTD+DARKSTS +VF LNGGAVVWRSIKQ CI DSTME +YVAACE AKE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL
        VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHLIR+IVHRG+VTVTKI SE+NMADPF KALTAK+FESHLHGLGL+GL
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL

KAA0067716.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-14385.81Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MKDL NAQYVLGIQIV N KNK LAMSQTSYI KMLSR+K+QNSK+GLLPYRYGIHLSKEQCPKT+Q+V+DM+NIPYASA+GSLMYAMLCTRP+ICYSVG
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVSRYQSNPGRDHWT +KNIL+YL+RTK+YMLVYGSKDLILTGYID DFQTD+DARKSTS +VFTLNGGAVVWRSIKQ CITDSTME EYVAA E  KE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQG
        VWLKKFL  LEVVPNMH+PITLYCDNSG VANSREPRSHKRGKHIERKYHLIREIVHRG+VTVTK+ SEQNMA PFTKALT KVF SHL GL L+G
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQG

TYK23767.1 gag/pol protein [Cucumis melo var. makuwa]8.1e-14184.51Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MK L NA YVL IQIV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKEQCPKT QEVEDM+NIPYA A+GSLMYAMLC RPDICYSV 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVS YQSNPGRDHWT +KNI++YL+RTKDYM VYGSKDLILT Y DSDFQTD+DARKSTS +VF LNGGAVVWRSIKQ CI DSTME +YVAACE AKE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL
        VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHLIR+IVHRG+VTVTKI SE+NMADPF KALTAK+FESHLHGLGL+GL
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL

TrEMBL top hitse value%identityAlignment
A0A5A7SP86 Gag/pol protein5.1e-14184.51Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MKDL NAQYVLG QIV NRKNK LAMSQTSYI KMLSRYK+QNSK+GLL YRYGIHLSKEQCPKT QEVEDM+NIPYAS   SLMYAMLCTR DICYSV 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVSRYQSNPGRDHWT +KNIL+YL+RTKDYMLVYGS+DLILTGY +SDFQTD+DARKSTSR+VFTLN GAV WRSIKQ CITDS +EA+YV ACE AKE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL
        VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK+GKHIE+K+HLIREIVHRG+VT+TKI  EQNMADPFTKALT KVFESHLHGLGL  L
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL

A0A5A7U945 Gag/pol protein4.7e-14284.93Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MKDL NAQYVLGI+IV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKEQCPKT QEV+DM+NIPYASAVGSLMYAMLCTRPDICYSVG
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVSRYQSNPG DHWT +KNIL+YL+RTKDYMLVYGSKDLILT Y DSDFQ+D+D RKSTS +VFTLNG AVVW+ IKQ CI DSTMEAEYVA+CE AKE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGL
        VWLKKFL  LE+VPN+HLPITLYCDNSGAVANS+EPRSHKR KHIERKYHLIREI+HRG+VT+TKI SEQN+ DPFTKALTAKVFESHLH L
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGL

A0A5A7UUR4 Gag/pol protein3.9e-14184.51Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MK L NA YVL IQIV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKEQCPKT QEVEDM+NIPYA A+GSLMYAMLC RPDICYSV 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVS YQSNPGRDHWT +KNI++YL+RTKDYM VYGSKDLILT Y DSDFQTD+DARKSTS +VF LNGGAVVWRSIKQ CI DSTME +YVAACE AKE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL
        VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHLIR+IVHRG+VTVTKI SE+NMADPF KALTAK+FESHLHGLGL+GL
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL

A0A5A7VMF5 Gag/pol protein6.5e-14485.81Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MKDL NAQYVLGIQIV N KNK LAMSQTSYI KMLSR+K+QNSK+GLLPYRYGIHLSKEQCPKT+Q+V+DM+NIPYASA+GSLMYAMLCTRP+ICYSVG
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVSRYQSNPGRDHWT +KNIL+YL+RTK+YMLVYGSKDLILTGYID DFQTD+DARKSTS +VFTLNGGAVVWRSIKQ CITDSTME EYVAA E  KE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQG
        VWLKKFL  LEVVPNMH+PITLYCDNSG VANSREPRSHKRGKHIERKYHLIREIVHRG+VTVTK+ SEQNMA PFTKALT KVF SHL GL L+G
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQG

A0A5D3DJL5 Gag/pol protein3.9e-14184.51Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MK L NA YVL IQIV NRKNK LAMSQTSYI KMLSRYK+QNSK+ LLPYRYGIHLSKEQCPKT QEVEDM+NIPYA A+GSLMYAMLC RPDICYSV 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        IVS YQSNPGRDHWT +KNI++YL+RTKDYM VYGSKDLILT Y DSDFQTD+DARKSTS +VF LNGGAVVWRSIKQ CI DSTME +YVAACE AKE 
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL
        VWLKKFL  LEVVPNM LPITLYCDNSGAVANSREPRSHK GKHIERKYHLIR+IVHRG+VTVTKI SE+NMADPF KALTAK+FESHLHGLGL+GL
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL

SwissProt top hitse value%identityAlignment
P04146 Copia protein9.0e-4234.98Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLP----YRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDIC
        M DL   ++ +GI+I    +   + +SQ++Y+ K+LS++ ++N      P      Y +  S E C           N P  S +G LMY MLCTRPD+ 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLP----YRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDIC

Query:  YSVGIVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLI----LTGYIDSDFQTDRDARKSTSRTVFTL-NGGAVVWRSIKQLCITDSTMEAEYV
         +V I+SRY S    + W  +K +LRYLK T D  L++  K+L     + GY+DSD+      RKST+  +F + +   + W + +Q  +  S+ EAEY+
Subjt:  YSVGIVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLI----LTGYIDSDFQTDRDARKSTSRTVFTL-NGGAVVWRSIKQLCITDSTMEAEYV

Query:  AACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHG
        A  E  +E +WLK  L  + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE V    + +  I +E  +AD FTK L A  F      
Subjt:  AACEEAKEVVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHG

Query:  LGL
        LGL
Subjt:  LGL

P0CV72 Secreted RxLR effector protein 1611.6e-2745.86Show/hide
Query:  MNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLI-LTGYIDSDFQTDRDARKSTSRTVFTLNGGA
        M N+PY SAVG++MY M+ TRPD+  +VG++S++ S+P   HW  +K +LRYL+ T+ Y L +       L GY D+D+  D ++R+STS  +F LNGG 
Subjt:  MNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLI-LTGYIDSDFQTDRDARKSTSRTVFTLNGGA

Query:  VVWRSIKQLCITDSTMEAEYVAACEEAKEVVWL
        V WRS KQ  +  S+ E EY+A  E  +E VWL
Subjt:  VVWRSIKQLCITDSTMEAEYVAACEEAKEVVWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-6745.45Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        MKDL  AQ +LG++IV  R ++ L +SQ  YI ++L R+ ++N+K    P    + LSK+ CP T +E  +M  +PY+SAVGSLMYAM+CTRPDI ++VG
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV
        +VSR+  NPG++HW  +K ILRYL+ T    L +G  D IL GY D+D   D D RKS++  +FT +GGA+ W+S  Q C+  ST EAEY+AA E  KE+
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEV

Query:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFE
        +WLK+FL+ L +    ++   +YCD+  A+  S+    H R KHI+ +YH IRE+V   ++ V KI + +N AD  TK +    FE
Subjt:  VWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.7e-3031.86Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        +KD     Y LGI+    R    L +SQ  YI  +L+R  +  +K    P      LS     K T   E      Y   VGSL Y +  TRPDI Y+V 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDY-MLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKE
         +S++   P  +H   +K ILRYL  T ++ + +     L L  Y D+D+  D+D   ST+  +  L    + W S KQ  +  S+ EAEY +    + E
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDY-MLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKE

Query:  VVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGL
        + W+   L  L +   +  P  +YCDN GA      P  H R KHI   YH IR  V  G + V  + +   +AD  TK L+   F++    +G+
Subjt:  VVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.2e-3131.19Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        +K+  +  Y LGI+    R  + L +SQ  Y   +L+R  +  +K    P      L+     K     E      Y   VGSL Y +  TRPD+ Y+V 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDY-MLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKE
         +S+Y   P  DHW  +K +LRYL  T D+ + +     L L  Y D+D+  D D   ST+  +  L    + W S KQ  +  S+ EAEY +    + E
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDY-MLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKE

Query:  VVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGL
        + W+   L  L +   +  P  +YCDN GA      P  H R KHI   YH IR  V  G + V  + +   +AD  TK L+   F++    +G+
Subjt:  VVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.3e-2328.63Show/hide
Query:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG
        ++DL   +Y LG++I   R    + + Q  Y   +L    +   K   +P    +  S           + ++   Y   +G LMY  + TR DI ++V 
Subjt:  MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVG

Query:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSK-DLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKE
         +S++   P   H   +  IL Y+K T    L Y S+ ++ L  + D+ FQ+ +D R+ST+     L    + W+S KQ  ++ S+ EAEY A      E
Subjt:  IVSRYQSNPGRDHWTTIKNILRYLKRTKDYMLVYGSK-DLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKE

Query:  VVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE
        ++WL +F + L++   +  P  L+CDN+ A+  +     H+R KHIE   H +RE
Subjt:  VVWLKKFLKGLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGATTTGAGAAATGCACAATATGTTCTTGGTATCCAAATAGTTTGGAACCGAAAGAACAAAAATCTAGCCATGTCTCAAACATCGTATATAAGCAAAATGTTGTC
AAGATATAAGATACAAAATTCCAAAGAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACAACTCAAGAAGTTGAGGATATGAATA
ACATTCCCTATGCTTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAATCCAATCCTGGA
CGTGATCATTGGACAACCATTAAGAATATTCTAAGATATCTTAAAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTAATCCTTACTGGATACATTGACTC
CGATTTTCAAACTGATAGAGATGCTAGAAAGTCTACATCAAGAACAGTTTTCACTCTGAATGGAGGAGCAGTAGTATGGAGAAGCATAAAACAATTATGTATTACCGACT
CCACTATGGAAGCTGAATATGTAGCTGCCTGTGAAGAAGCGAAAGAAGTAGTATGGCTTAAAAAGTTCTTAAAAGGTTTGGAAGTTGTTCCAAATATGCATCTGCCAATC
ACCTTATACTGTGACAACAGTGGTGCAGTTGCAAATTCACGAGAACCAAGAAGTCATAAACGAGGAAAGCACATTGAACGAAAGTACCATCTTATTAGGGAAATCGTACA
TCGAGGAAACGTTACAGTAACAAAAATCTGCTCCGAGCAAAACATGGCAGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGTCACCTACATGGTTTAGGTC
TACAGGGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGATTTGAGAAATGCACAATATGTTCTTGGTATCCAAATAGTTTGGAACCGAAAGAACAAAAATCTAGCCATGTCTCAAACATCGTATATAAGCAAAATGTTGTC
AAGATATAAGATACAAAATTCCAAAGAGGGTCTGCTGCCGTACAGATATGGAATTCATTTATCAAAAGAACAATGTCCAAAGACAACTCAAGAAGTTGAGGATATGAATA
ACATTCCCTATGCTTCTGCTGTTGGGAGCCTGATGTATGCAATGTTATGTACTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAATCCAATCCTGGA
CGTGATCATTGGACAACCATTAAGAATATTCTAAGATATCTTAAAAGAACAAAAGACTACATGCTTGTGTATGGTTCTAAGGATCTAATCCTTACTGGATACATTGACTC
CGATTTTCAAACTGATAGAGATGCTAGAAAGTCTACATCAAGAACAGTTTTCACTCTGAATGGAGGAGCAGTAGTATGGAGAAGCATAAAACAATTATGTATTACCGACT
CCACTATGGAAGCTGAATATGTAGCTGCCTGTGAAGAAGCGAAAGAAGTAGTATGGCTTAAAAAGTTCTTAAAAGGTTTGGAAGTTGTTCCAAATATGCATCTGCCAATC
ACCTTATACTGTGACAACAGTGGTGCAGTTGCAAATTCACGAGAACCAAGAAGTCATAAACGAGGAAAGCACATTGAACGAAAGTACCATCTTATTAGGGAAATCGTACA
TCGAGGAAACGTTACAGTAACAAAAATCTGCTCCGAGCAAAACATGGCAGATCCGTTTACAAAAGCTCTCACGGCTAAAGTGTTTGAGAGTCACCTACATGGTTTAGGTC
TACAGGGTTTGTAA
Protein sequenceShow/hide protein sequence
MKDLRNAQYVLGIQIVWNRKNKNLAMSQTSYISKMLSRYKIQNSKEGLLPYRYGIHLSKEQCPKTTQEVEDMNNIPYASAVGSLMYAMLCTRPDICYSVGIVSRYQSNPG
RDHWTTIKNILRYLKRTKDYMLVYGSKDLILTGYIDSDFQTDRDARKSTSRTVFTLNGGAVVWRSIKQLCITDSTMEAEYVAACEEAKEVVWLKKFLKGLEVVPNMHLPI
TLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGNVTVTKICSEQNMADPFTKALTAKVFESHLHGLGLQGL