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Cmc03g0070021 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0070021
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptiontranscription factor BEE 3-like
Genome locationCMiso1.1chr03:15640522..15651289
RNA-Seq ExpressionCmc03g0070021
SyntenyCmc03g0070021
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR024097 - Basic helix-loop-helix leucine zipper transcription factor
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939188.1 transcription factor BEE 3-like [Cucurbita moschata]1.9e-4170Show/hide
Query:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVP---------SPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE
        NDLE++ NHFTVESSN++ D +QG  ++S NPFF ++FC EKF HFNEIPSCV           P +SSFP L+ D SKS G RKRKRENERD EEKPK 
Subjt:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVP---------SPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE

Query:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        VIHVR KRGQATDSHSL+ERVRREKINQRLRFLQDLV GC
Subjt:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

XP_022994041.1 transcription factor BEE 3-like isoform X1 [Cucurbita maxima]6.2e-4067.86Show/hide
Query:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL---------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE
        NDLE++ NHFTVESSN++ D +QG  ++S NPFF ++FC EKF HFNEIPSCV             +SSFP  N + SKS G RKRKRENERD EEKPK 
Subjt:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL---------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE

Query:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        VIHVR KRGQATDSHSL+ERVRR+KINQRLRFLQDLV GC
Subjt:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

XP_022994043.1 transcription factor BEE 3-like isoform X2 [Cucurbita maxima]6.2e-4067.86Show/hide
Query:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL---------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE
        NDLE++ NHFTVESSN++ D +QG  ++S NPFF ++FC EKF HFNEIPSCV             +SSFP  N + SKS G RKRKRENERD EEKPK 
Subjt:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL---------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE

Query:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        VIHVR KRGQATDSHSL+ERVRR+KINQRLRFLQDLV GC
Subjt:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

XP_038886374.1 transcription factor BEE 3-like isoform X1 [Benincasa hispida]3.4e-4679.85Show/hide
Query:  MICNDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKEVIHVRV
        M  N LE+M NHFTVESSNQND   Q  PI   NPFF ESFC EKFAHFNEIPSCV  PL+SSFPT NR + KSLG RKRKRENERD EEKPKEVIHVR 
Subjt:  MICNDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKEVIHVRV

Query:  KRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        KRGQATDSHSL+ERVRREKINQRLRFLQDLV GC
Subjt:  KRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

XP_038886375.1 transcription factor BEE 3-like isoform X2 [Benincasa hispida]3.4e-4679.85Show/hide
Query:  MICNDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKEVIHVRV
        M  N LE+M NHFTVESSNQND   Q  PI   NPFF ESFC EKFAHFNEIPSCV  PL+SSFPT NR + KSLG RKRKRENERD EEKPKEVIHVR 
Subjt:  MICNDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKEVIHVRV

Query:  KRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        KRGQATDSHSL+ERVRREKINQRLRFLQDLV GC
Subjt:  KRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

TrEMBL top hitse value%identityAlignment
A0A2N9FPY7 BHLH domain-containing protein4.7e-1750.77Show/hide
Query:  TVESSNQNDDDHQGVPI-----TSTNPFFNESFCCEKFAHFNEIPSCVPSPLHSSFPTLNRD----NSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQ
        TV SSN +D     +P+         P    S   + F H  +  + +P     +  T +RD    N KSL  RKR+R N+ D+ EKPKEVIHVR KRGQ
Subjt:  TVESSNQNDDDHQGVPI-----TSTNPFFNESFCCEKFAHFNEIPSCVPSPLHSSFPTLNRD----NSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQ

Query:  ATDSHSLSERVRREKINQRLRFLQDLVSGC
        ATDSHSL ERVRREKIN+RLRFLQDLV GC
Subjt:  ATDSHSLSERVRREKINQRLRFLQDLVSGC

A0A6J1CEL5 transcription factor BEE 3-like1.5e-3165.19Show/hide
Query:  EIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL-------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKEVIHVR
        E++   FT ESS  N  DHQG    S NPFF E FC     HFNEIPS VP  L       +SSFP +N  +SKSLG  KRKRE+ERD EEK +EVIHVR
Subjt:  EIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL-------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKEVIHVR

Query:  VKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
         KRGQATDSHSL+ERVRREKINQRLRFLQDLV GC
Subjt:  VKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

A0A6J1FKZ5 transcription factor BEE 3-like9.4e-4270Show/hide
Query:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVP---------SPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE
        NDLE++ NHFTVESSN++ D +QG  ++S NPFF ++FC EKF HFNEIPSCV           P +SSFP L+ D SKS G RKRKRENERD EEKPK 
Subjt:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVP---------SPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE

Query:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        VIHVR KRGQATDSHSL+ERVRREKINQRLRFLQDLV GC
Subjt:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

A0A6J1JY10 transcription factor BEE 3-like isoform X13.0e-4067.86Show/hide
Query:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL---------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE
        NDLE++ NHFTVESSN++ D +QG  ++S NPFF ++FC EKF HFNEIPSCV             +SSFP  N + SKS G RKRKRENERD EEKPK 
Subjt:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL---------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE

Query:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        VIHVR KRGQATDSHSL+ERVRR+KINQRLRFLQDLV GC
Subjt:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

A0A6J1K416 transcription factor BEE 3-like isoform X23.0e-4067.86Show/hide
Query:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL---------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE
        NDLE++ NHFTVESSN++ D +QG  ++S NPFF ++FC EKF HFNEIPSCV             +SSFP  N + SKS G RKRKRENERD EEKPK 
Subjt:  NDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPL---------HSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKE

Query:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        VIHVR KRGQATDSHSL+ERVRR+KINQRLRFLQDLV GC
Subjt:  VIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

SwissProt top hitse value%identityAlignment
A4D998 Transcription factor bHLH751.9e-1565.71Show/hide
Query:  NRDNSKSLGRRKRKRENER---DIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        N++ S S  RRKR  E E    D  +KPK+V+HVR KRGQATDSHSL+ERVRREKIN+RL+ LQDLV GC
Subjt:  NRDNSKSLGRRKRKRENER---DIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

Q8GWK7 Transcription factor BEE 35.2e-1359.09Show/hide
Query:  RDNSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        ++NS   G+R + RE     EEK +EV+HVR +RGQATDSHS++ERVRR KIN+RL+ LQD+V GC
Subjt:  RDNSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

Q8GZ13 Transcription factor BEE 11.8e-1363.93Show/hide
Query:  SLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        SL R KR ++ + + +EK +EV+HVR +RGQATDSHSL+ERVRR KIN+RLR LQD+V GC
Subjt:  SLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

Q93W88 Transcription factor bHLH1375.7e-1258.82Show/hide
Query:  NRDNSK-SLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        N +NSK  +  RK K++     EE P + IHVR +RGQATDSHSL+ERVRREKI++R+R LQ+LV GC
Subjt:  NRDNSK-SLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

Q9FJL4 Transcription factor bHLH788.8e-1347.62Show/hide
Query:  NEIPSCVPSPLHSSFPTLN--RDNSKSLGRR--KRKRENERDIEEK----------------PKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQD
        N I +  PSP  S     N  +  SKS   +  KR+RE E D EE+                PK+ IHVR +RGQATDSHSL+ERVRREKI +R++ LQD
Subjt:  NEIPSCVPSPLHSSFPTLN--RDNSKSLGRR--KRKRENERDIEEK----------------PKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQD

Query:  LVSGC
        LV GC
Subjt:  LVSGC

Arabidopsis top hitse value%identityAlignment
AT1G18400.1 BR enhanced expression 11.3e-1463.93Show/hide
Query:  SLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        SL R KR ++ + + +EK +EV+HVR +RGQATDSHSL+ERVRR KIN+RLR LQD+V GC
Subjt:  SLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.3e-1665.71Show/hide
Query:  NRDNSKSLGRRKRKRENER---DIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        N++ S S  RRKR  E E    D  +KPK+V+HVR KRGQATDSHSL+ERVRREKIN+RL+ LQDLV GC
Subjt:  NRDNSKSLGRRKRKRENER---DIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

AT1G73830.1 BR enhanced expression 33.7e-1459.09Show/hide
Query:  RDNSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        ++NS   G+R + RE     EEK +EV+HVR +RGQATDSHS++ERVRR KIN+RL+ LQD+V GC
Subjt:  RDNSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

AT1G73830.2 BR enhanced expression 33.7e-1459.09Show/hide
Query:  RDNSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC
        ++NS   G+R + RE     EEK +EV+HVR +RGQATDSHS++ERVRR KIN+RL+ LQD+V GC
Subjt:  RDNSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQDLVSGC

AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.3e-1447.62Show/hide
Query:  NEIPSCVPSPLHSSFPTLN--RDNSKSLGRR--KRKRENERDIEEK----------------PKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQD
        N I +  PSP  S     N  +  SKS   +  KR+RE E D EE+                PK+ IHVR +RGQATDSHSL+ERVRREKI +R++ LQD
Subjt:  NEIPSCVPSPLHSSFPTLN--RDNSKSLGRR--KRKRENERDIEEK----------------PKEVIHVRVKRGQATDSHSLSERVRREKINQRLRFLQD

Query:  LVSGC
        LV GC
Subjt:  LVSGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTGCAATGACTTAGAGATAATGAAAAACCATTTTACAGTGGAGAGCTCCAATCAAAATGATGATGATCATCAAGGAGTACCAATCACCTCCACTAATCCTTTTTT
CAATGAGAGCTTTTGTTGTGAAAAGTTTGCTCATTTTAATGAAATCCCGAGCTGCGTTCCATCTCCTCTTCACTCTTCATTTCCTACATTAAACAGAGACAATTCCAAGA
GCTTAGGAAGAAGAAAGAGGAAAAGAGAAAACGAAAGGGATATTGAGGAGAAGCCAAAAGAAGTGATTCATGTGAGGGTAAAAAGAGGCCAAGCTACTGATAGTCATAGT
TTATCAGAAAGGGTAAGAAGAGAGAAAATAAATCAGAGGCTGAGATTCTTGCAGGACTTGGTTTCAGGATGCTAA
mRNA sequenceShow/hide mRNA sequence
TTGGTGGAGAGATGATCTGCAATGACTTAGAGATAATGAAAAACCATTTTACAGTGGAGAGCTCCAATCAAAATGATGATGATCATCAAGGAGTACCAATCACCTCCACT
AATCCTTTTTTCAATGAGAGCTTTTGTTGTGAAAAGTTTGCTCATTTTAATGAAATCCCGAGCTGCGTTCCATCTCCTCTTCACTCTTCATTTCCTACATTAAACAGAGA
CAATTCCAAGAGCTTAGGAAGAAGAAAGAGGAAAAGAGAAAACGAAAGGGATATTGAGGAGAAGCCAAAAGAAGTGATTCATGTGAGGGTAAAAAGAGGCCAAGCTACTG
ATAGTCATAGTTTATCAGAAAGGGTAAGAAGAGAGAAAATAAATCAGAGGCTGAGATTCTTGCAGGACTTGGTTTCAGGATGCTAAAAGACAATGGGAATGGCTGTTATG
TTGGATGTAATCATAAATTACATCCAATCTCTGCAGATTCAGATCGAGTTTCTGTCAGTGAAGCTTTCAGTTGGTAGTCGGTACTATGGACTTTAACAAAACGACCGAGA
CTGATGACATTGAGATGATGCAGGACTGGTTCGATCATTGGAAGTAAGCTGTGGAATGTTGTCCTAAGTTAAGGTTGAGTTGGATCTGTCATTAACTTTTGGGATTTTCT
AGGGAAGCCTGATTTTGCTGTCAGAAGTGTATTTCTATGAACTAAGCTAATCTCCAGGTGTTCCTTGTGTTTACCGAAGACCAGTTTTGTCCTAGGTGTTCCTTTGGGTT
CACCAAAGACCAGAGATGTTCCTACGGGATCACAGATTGAACGTGTTTGGGAACGTGCCAATTAGGGAAAAGCTAAAGGGAGAGGTAAAGGAAAGCTGGCGAATGACAAG
AAGTGACTGTGGCATGCCATAGGAAACGTTTTGCTTCCATCATTATGATTTTAGTTTGATTTTAGCATATCTTGTACTTTCATTACTACTCTTTAAAACTAGATAGGGCC
TGAACTATGATTTTGTTATTGATATTTATTTCTATTTATTTAGGACTTTAGATG
Protein sequenceShow/hide protein sequence
MICNDLEIMKNHFTVESSNQNDDDHQGVPITSTNPFFNESFCCEKFAHFNEIPSCVPSPLHSSFPTLNRDNSKSLGRRKRKRENERDIEEKPKEVIHVRVKRGQATDSHS
LSERVRREKINQRLRFLQDLVSGC