CuGenDBv2

Gene ID	Cmc03g0070071
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr03:15728879..15731125
RNA-Seq Expression	Cmc03g0070071
Synteny	Cmc03g0070071
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:1901800 - positive regulation of proteasomal protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0000502 - proteasome complex (cellular component) GO:0016887 - ATPase activity (molecular function) GO:0036402 - proteasome-activating ATPase activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025848.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

KAA0031437.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

KAA0033825.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

TYK28368.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

TYK28422.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TEQ2 Reverse transcriptase

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

A0A5A7TSL0 Reverse transcriptase

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

A0A5A7UBS1 Reverse transcriptase

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

A0A5D3CQB5 Reverse transcriptase

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

A0A5D3DY07 Reverse transcriptase

0.0e+00

98.18

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        MSFGLTNAPAVFMDLMNRVFK+FLDSFVIVFIDDILIYSKTEAEHE+HLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
        TRPSTVSEIRSFLGLAGYYRRF+EDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYA

Query:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK
        SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRKVAHSAA+ITK
Subjt:  SRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITK

Query:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
        QTPLLRDFERAEIAVSVGEVTAQLAQL VQPTLRQKIIAAQL+DPYLAEKRR+VETEQGE FSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH
Subjt:  QTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMH

Query:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA
        PGSTKMYQDLRSVYWWRGMKRDVA+FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGY VIWVVVDRLTKSAHFVPGKSTYTA
Subjt:  PGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTA

Query:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
        SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI
Subjt:  SKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATI

Query:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
        GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF
Subjt:  GMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPF

Query:  EILERIARVAYRLALP
        EILERI  VAYRLALP
Subjt:  EILERIARVAYRLALP

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.2e-103

31.54

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA
         +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA

Query:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL
        K  KL+P F GPF +L++     Y L LP    H+  S   + +L
Subjt:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL

P0CT35 Transposon Tf2-2 polyprotein

1.2e-103

31.54

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA
         +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA

Query:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL
        K  KL+P F GPF +L++     Y L LP    H+  S   + +L
Subjt:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL

P0CT36 Transposon Tf2-3 polyprotein

1.2e-103

31.54

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA
         +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA

Query:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL
        K  KL+P F GPF +L++     Y L LP    H+  S   + +L
Subjt:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL

P0CT37 Transposon Tf2-4 polyprotein

1.2e-103

31.54

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA
         +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA

Query:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL
        K  KL+P F GPF +L++     Y L LP    H+  S   + +L
Subjt:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL

P0CT41 Transposon Tf2-12 polyprotein

1.2e-103

31.54

Show/hide

Query:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW
        M +G++ APA F   +N +  +  +S V+ ++DDILI+SK+E+EH KH+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W
Subjt:  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNW

Query:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----
         +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+P   ++ + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  TRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGK-----

Query:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIYTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL
             ++ +  P+ +D E   I          + Q+++    + +++    ND  L       +    E+  +   DGL+   +  + +P D+ +   ++
Subjt:  AHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQPTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGR--LCVPEDSAVKTELL

Query:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA
         + H     +HPG   +   +   + W+G+++ + E+V  C  CQ  K+    P G LQP+      WES+SMDFIT LP++  GY  ++VVVDR +K A
Subjt:  TEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSA

Query:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME
          VP   + TA +  +++   ++   G P  II+D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR        +W  H+ L++
Subjt:  HFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLME

Query:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA
         +YNN+  +   M PFE ++      SP+   E+        E  Q T    Q ++  + T   + K Y D++ +++ EF+ GD+V +K     G L   
Subjt:  FAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL-EFEVGDMVFLKVAPMKGVLRFA

Query:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL
        K  KL+P F GPF +L++     Y L LP    H+  S   + +L
Subjt:  KKGKLSPRFVGPFEILERIARVAYRLALP----HLCCSARRIPYL

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

3.0e-25

42.4

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Query:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  W  P   +E+R FLGL GYYRRF++++ +I  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLRKVTFLG--HVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVW

Query:  SPACERSFQELKQKLVTAPVLTVPD
        +     +F+ LK  + T PVL +PD
Subjt:  SPACERSFQELKQKLVTAPVLTVPD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTCGGCTTGACTAACGCTCCTGCAGTATTCATGGATTTGATGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCCTCAT
TTACTCAAAAACTGAGGCGGAGCACGAGAAGCACTTACACCAGGTTTTGGAGACCCTTCGAGCCAACAAGTTGTATGCCAAATTCTCCAAGTGTGAATTCTGGTTAAGGA
AGGTGACGTTTCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCAGTAGATCCCGCAAAGATTGAAGCAGTGACCAACTGGACTCGACCGTCCACGGTTAGTGAAATTCGA
AGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCATGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTCTGGAGCCC
AGCCTGCGAGAGGAGCTTTCAGGAGCTCAAACAGAAGCTAGTGACTGCACCGGTCCTGACAGTGCCCGATGGTTCGGGAAACTTTGTAATCTATAGTGACGCCTCCAAGA
AGGGACTGGGATGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTGAAGATCCATGAGCAGAACTACCCTACCCATGACTTGGAGTTGGCAGCT
GTAGTCTTTGCACTGAAGATATGGAGGCACTATCTGTACGGCGAGAAGATTCAGATTTACACCGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACAT
GAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTACGACTGCGAGATCTTATACCACCCAGGCAAAGCAAATGTAGTGGCTGACCCGCTGAGTAGGAAAGTGGCACATT
CAGCAGCGGTAATCACCAAGCAGACCCCCTTACTCAGGGATTTTGAGAGAGCCGAGATTGCAGTCTCAGTAGGTGAGGTTACCGCACAGTTGGCTCAGTTGGCAGTTCAG
CCAACCTTGAGGCAAAAGATCATTGCTGCTCAGCTGAATGACCCTTACTTGGCAGAGAAACGTCGTATGGTAGAGACAGAGCAAGGTGAAGACTTCTCCATATCCTCTGA
CGATGGCCTTATGTTTGAGGGACGCCTGTGTGTGCCGGAAGACAGCGCAGTTAAGACGGAGCTTTTGACTGAGGCTCACAGTTCCCCGTTTACCATGCATCCTGGGAGTA
CGAAGATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGGGCATGAAGAGGGATGTGGCAGAATTTGTCAGTAGATGCTTGGTGTGCCAGCAGGTGAAGGCACCTAGG
CAGCATCCAGCAGGGTTGTTGCAACCCTTGAGTGTGCCAGGGTGGAAGTGGGAGAGTGTGTCGATGGATTTTATTACGGGACTGCCCAAGACCCTAAGGGGCTACATGGT
GATCTGGGTTGTGGTCGACAGACTCACGAAGTCGGCCCATTTCGTGCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGCTATATATGACAGAGATTGTGAGAC
TACATGGAGTACCCGTATCCATCATTTCAGACAGAGACGCCCGTTTCACATCGAAGTTCTGGAAAGGACTTCAACTTGCATTAGGTACGAGGTTGGACTTCAGCACGGCA
TTCCACCCTCAGACTGATGGTCAGACAGAGAGATTGAACCAGATTTTGGAAGACATGCTGCGAGCCTGCGTACTAGAGTTTTCAGGAAGTTGGGACTCCCATCTGCATCT
GATGGAGTTTGCCTATAACAACAGCTACCAGGCTACTATCGGTATGGCACCGTTCGAGGCTCTGTATGGCAAGTGCTGTAGATCCCCTGTCTGCTGGGGCGAGGTTGGAG
AGCAGAGGATGCTAGGCCCCGAGTTAGTGCAGACGACCAACGCAGCCATACAGAAGATCCGAGCTCGTATGCTGACAGCCCAGAGCAGACAGAAGAGTTACGCTGATGTA
CGACGTAAGGACCTCGAGTTTGAAGTGGGAGATATGGTCTTTCTGAAGGTTGCACCCATGAAGGGTGTTCTGAGGTTCGCGAAGAAGGGGAAGCTGAGTCCACGCTTCGT
AGGGCCGTTCGAGATATTGGAGCGGATTGCCCGCGTGGCTTACCGCTTGGCGCTACCCCATCTTTGCTGCAGTGCACGACGTATTCCATATCTCCATGCTGAGGAAATAT
GTCGCAGACCCAACACATGTGGTGGACTTCGAGCCACTGCAGATTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEKHLHQVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR
SFLGLAGYYRRFMEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAA
VVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADPLSRKVAHSAAVITKQTPLLRDFERAEIAVSVGEVTAQLAQLAVQ
PTLRQKIIAAQLNDPYLAEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAEFVSRCLVCQQVKAPR
QHPAGLLQPLSVPGWKWESVSMDFITGLPKTLRGYMVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIISDRDARFTSKFWKGLQLALGTRLDFSTA
FHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADV
RRKDLEFEVGDMVFLKVAPMKGVLRFAKKGKLSPRFVGPFEILERIARVAYRLALPHLCCSARRIPYLHAEEICRRPNTCGGLRATAD

Cmc03g0070071 (gene) of Melon (Charmono) v1.1 genome