; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0070601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0070601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionU2 snRNP auxiliary factor large subunit
Genome locationCMiso1.1chr03:16457425..16460757
RNA-Seq ExpressionCmc03g0070601
SyntenyCmc03g0070601
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138355.1 splicing factor U2af large subunit A isoform X7 [Cucumis sativus]5.5e-9197.61Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYD RYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDR+RERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGR RDDDDYYR RDYDRRRDYDKEREDRHRRRSRSRSKGIHEH SRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAAG
        LSGATAAAG
Subjt:  LSGATAAAG

XP_008445607.1 PREDICTED: splicing factor U2af large subunit A-like isoform X1 [Cucumis melo]3.8e-9299.52Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAA
        LSGATAAA
Subjt:  LSGATAAA

XP_008445608.1 PREDICTED: splicing factor U2af large subunit A-like isoform X3 [Cucumis melo]9.9e-9399.52Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAAG
        LSGATAAAG
Subjt:  LSGATAAAG

XP_016900122.1 PREDICTED: splicing factor U2af large subunit A-like isoform X2 [Cucumis melo]3.8e-9299.52Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAA
        LSGATAAA
Subjt:  LSGATAAA

XP_016900123.1 PREDICTED: splicing factor U2af large subunit B-like isoform X4 [Cucumis melo]3.8e-9299.52Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAA
        LSGATAAA
Subjt:  LSGATAAA

TrEMBL top hitse value%identityAlignment
A0A0A0K920 U2 snRNP auxiliary factor large subunit1.0e-9097.6Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYD RYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDR+RERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGR RDDDDYYR RDYDRRRDYDKEREDRHRRRSRSRSKGIHEH SRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAA
        LSGATAAA
Subjt:  LSGATAAA

A0A1S3BCM3 U2 snRNP auxiliary factor large subunit4.8e-9399.52Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAAG
        LSGATAAAG
Subjt:  LSGATAAAG

A0A1S3BDZ2 U2 snRNP auxiliary factor large subunit1.8e-9299.52Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAA
        LSGATAAA
Subjt:  LSGATAAA

A0A1S4DVW1 U2 snRNP auxiliary factor large subunit1.8e-9299.52Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAA
        LSGATAAA
Subjt:  LSGATAAA

A0A1S4DVX8 U2 snRNP auxiliary factor large subunit1.8e-9299.52Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
        RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRD DRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI
Subjt:  RDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAI

Query:  LSGATAAA
        LSGATAAA
Subjt:  LSGATAAA

SwissProt top hitse value%identityAlignment
O23212 Splicing factor U2af large subunit A2.9e-1850.96Show/hide
Query:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD
        +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++ER+KGRD+DRERD +   R RDRD EKS        K+R RD+DRD  
Subjt:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD

Query:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAIL
            R   HRD  R+RGERRE G  RDDDDY RS  RD+DRRRD   +R  R  RRSRSRSK       RS   TRSRS SKSK R+SGFDMAPP +A+L
Subjt:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAIL

Query:  SGATAAAG
        +   A  G
Subjt:  SGATAAAG

Q2QZL4 Splicing factor U2af large subunit B8.1e-2154.49Show/hide
Query:  DTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDD
        DTH+        RD      K RE+E+DK R+R R+RDRDRGRDRDR+K      D+EKDRD++RDRD+DRD+DRDRHHR  HR+R E R+     DD D
Subjt:  DTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRDRHHRDRHRDRGERREGGRSRDDDD

Query:  YYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAIL
         +RSRD +RRRD++++   RHR RSRSRS+G           +RSRSRSKSKR+SGFDMAPP  A++
Subjt:  YYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAIL

Q8L716 Splicing factor U2af large subunit B3.2e-2552.29Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        M  Y+G  +G     +N+ + +       S      H DSKS+  S D +++SSK  EK+ + GRD+D  +DRDR +DRDREKS+D  RDREK RDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRS--------RSKGIHEHTSRSPSPTRSRSRSKSKRISGF
        R++ +DR RDRHHRDRHRDR  ER E     DDD + RSRD DRRR  D++RE RHRRRSRS        RS+  H H S   S +RSRSRSKSKR SGF
Subjt:  RDKDRDRDRDRHHRDRHRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRS--------RSKGIHEHTSRSPSPTRSRSRSKSKRISGF

Query:  DMAPPTTAILSGATAAAG
        DMAPP   + + A AAAG
Subjt:  DMAPPTTAILSGATAAAG

Q9ZR39 Splicing factor U2af large subunit A1.7e-3461.17Show/hide
Query:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDY--ERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDR
        YEGNG D DN  +G SP                 SQH SRD+  ER+SS+SR+KERDKGRD+DR+RDR+R RDRD        RDR K+RD+DR RD+D 
Subjt:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDY--ERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDR

Query:  DRDRDRHHRDRHRDRGERREGGRS--RDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAILSG
        ++DRDRHHRDRHRDR +RRE  R+  RD+DD +RSRDYDRRRD DK+RED  RRR R  S+G  EH S+S    RSRS SKSKRISGFDMAPPTTA+L G
Subjt:  DRDRDRHHRDRHRDRGERREGGRS--RDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAILSG

Query:  ATAAAG
        AT AAG
Subjt:  ATAAAG

Q9ZR40 Splicing factor U2af large subunit B2.3e-3960.95Show/hide
Query:  YEGNGEDADNYGDGFSPQARAASHGGH----DTHTDSKSQHGSRDYE--RESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDR
        YEGNGED DNY  G SP  ++ S  GH    D ++DSKSQH SR+ E  R+SS+SREK+R++GRD+DR+RDRDR R RDR            DR RDRD+
Subjt:  YEGNGEDADNYGDGFSPQARAASHGGH----DTHTDSKSQHGSRDYE--RESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDR

Query:  DKDRDRDRDRHHRDRHRDRGERREGGRS--RDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTA
        D++R++DRDRHH DRHRDR +RRE  R+  RDDDD +R+RDYD++R++ K+RE RHR RSRSR  G  EH SRS    RSRSRSKSKRISGFDMAPPT+A
Subjt:  DKDRDRDRDRHHRDRHRDRGERREGGRS--RDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTA

Query:  ILSGATAAAG
        +L G TAAAG
Subjt:  ILSGATAAAG

Arabidopsis top hitse value%identityAlignment
AT1G60900.1 U2 snRNP auxilliary factor, large subunit, splicing factor2.3e-2652.29Show/hide
Query:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD
        M  Y+G  +G     +N+ + +       S      H DSKS+  S D +++SSK  EK+ + GRD+D  +DRDR +DRDREKS+D  RDREK RDRDRD
Subjt:  MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRD

Query:  RDKDRDRDRDRHHRDRHRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRS--------RSKGIHEHTSRSPSPTRSRSRSKSKRISGF
        R++ +DR RDRHHRDRHRDR  ER E     DDD + RSRD DRRR  D++RE RHRRRSRS        RS+  H H S   S +RSRSRSKSKR SGF
Subjt:  RDKDRDRDRDRHHRDRHRDRG-ERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRS--------RSKGIHEHTSRSPSPTRSRSRSKSKRISGF

Query:  DMAPPTTAILSGATAAAG
        DMAPP   + + A AAAG
Subjt:  DMAPPTTAILSGATAAAG

AT4G36690.1 U2 snRNP auxilliary factor, large subunit, splicing factor2.0e-1950.96Show/hide
Query:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD
        +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++ER+KGRD+DRERD +   R RDRD EKS        K+R RD+DRD  
Subjt:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD

Query:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAIL
            R   HRD  R+RGERRE G  RDDDDY RS  RD+DRRRD   +R  R  RRSRSRSK       RS   TRSRS SKSK R+SGFDMAPP +A+L
Subjt:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAIL

Query:  SGATAAAG
        +   A  G
Subjt:  SGATAAAG

AT4G36690.2 U2 snRNP auxilliary factor, large subunit, splicing factor2.0e-1950.96Show/hide
Query:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD
        +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++ER+KGRD+DRERD +   R RDRD EKS        K+R RD+DRD  
Subjt:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD

Query:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAIL
            R   HRD  R+RGERRE G  RDDDDY RS  RD+DRRRD   +R  R  RRSRSRSK       RS   TRSRS SKSK R+SGFDMAPP +A+L
Subjt:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAIL

Query:  SGATAAAG
        +   A  G
Subjt:  SGATAAAG

AT4G36690.3 U2 snRNP auxilliary factor, large subunit, splicing factor2.0e-1950.96Show/hide
Query:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD
        +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++ER+KGRD+DRERD +   R RDRD EKS        K+R RD+DRD  
Subjt:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD

Query:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAIL
            R   HRD  R+RGERRE G  RDDDDY RS  RD+DRRRD   +R  R  RRSRSRSK       RS   TRSRS SKSK R+SGFDMAPP +A+L
Subjt:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRS--RDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAIL

Query:  SGATAAAG
        +   A  G
Subjt:  SGATAAAG

AT4G36690.4 U2 snRNP auxilliary factor, large subunit, splicing factor3.2e-1243.69Show/hide
Query:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD
        +EGNG  AD   D    +      G  +   DSK +  SRD+ERE+S+S+++ER+KGRD+DRERD +   R RDRD EKS        K+R RD+DRD  
Subjt:  YEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRD---RGRDRDREKSKDGERDREKDRDRDRDRDKD

Query:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAILSG
            R   HRD  R+RGERRE G                          R  RRSRSRSK       RS   TRSRS SKSK R+SGFDMAPP +A+L+ 
Subjt:  RDRDRDRHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSK-RISGFDMAPPTTAILSG

Query:  ATAAAG
          A  G
Subjt:  ATAAAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGATTACGACGGCAGGTACGAAGGTAATGGGGAAGATGCAGACAACTATGGCGATGGTTTTTCTCCCCAAGCCCGTGCTGCCAGCCACGGTGGCCACGATACTCA
CACTGATTCCAAATCTCAGCATGGTTCTAGAGATTATGAAAGAGAGTCTTCGAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGTGATAGGGACAGGGAGAGGGATCGAG
ACCGAGGTCGAGATAGGGATAGAGAGAAAAGCAAGGATGGGGAAAGAGATCGGGAGAAGGACAGAGATAGGGATAGGGATCGCGACAAAGACCGTGATAGGGATCGTGAC
CGCCATCATAGAGACCGCCACAGGGATCGAGGTGAGAGAAGGGAAGGGGGCAGAAGTAGAGATGATGATGATTACTACAGGAGTAGAGACTATGACAGACGGAGAGATTA
TGATAAAGAACGAGAAGACAGGCACAGACGTAGGTCCCGTTCTCGCTCAAAGGGAATACATGAGCATACGTCAAGGTCCCCTTCTCCAACGCGGTCAAGATCACGCTCCA
AAAGCAAACGAATTAGTGGTTTTGACATGGCTCCTCCAACAACTGCAATATTGTCTGGTGCAACTGCTGCTGCAGGTACCTAA
mRNA sequenceShow/hide mRNA sequence
TTACCCAAAATACCCATCTCTATCTACGAGGGTTACTACTTAGATACTGATATATAAACAGCGGGAACTCTCTTCCGAACCCTAGGATTCTCGTTAGCTTTCTTCTCCCC
AATTTCATCACCAAAATTTTCTCCCACCAAAAGATTCACAAATCACAGCTAAATTCTGTGGATCATACTCCCAGTTTAATCATGACGGATTACGACGGCAGGTACGAAGG
TAATGGGGAAGATGCAGACAACTATGGCGATGGTTTTTCTCCCCAAGCCCGTGCTGCCAGCCACGGTGGCCACGATACTCACACTGATTCCAAATCTCAGCATGGTTCTA
GAGATTATGAAAGAGAGTCTTCGAAAAGTCGAGAAAAAGAAAGAGATAAGGGGCGTGATAGGGACAGGGAGAGGGATCGAGACCGAGGTCGAGATAGGGATAGAGAGAAA
AGCAAGGATGGGGAAAGAGATCGGGAGAAGGACAGAGATAGGGATAGGGATCGCGACAAAGACCGTGATAGGGATCGTGACCGCCATCATAGAGACCGCCACAGGGATCG
AGGTGAGAGAAGGGAAGGGGGCAGAAGTAGAGATGATGATGATTACTACAGGAGTAGAGACTATGACAGACGGAGAGATTATGATAAAGAACGAGAAGACAGGCACAGAC
GTAGGTCCCGTTCTCGCTCAAAGGGAATACATGAGCATACGTCAAGGTCCCCTTCTCCAACGCGGTCAAGATCACGCTCCAAAAGCAAACGAATTAGTGGTTTTGACATG
GCTCCTCCAACAACTGCAATATTGTCTGGTGCAACTGCTGCTGCAGGTACCTAAATCCTTA
Protein sequenceShow/hide protein sequence
MTDYDGRYEGNGEDADNYGDGFSPQARAASHGGHDTHTDSKSQHGSRDYERESSKSREKERDKGRDRDRERDRDRGRDRDREKSKDGERDREKDRDRDRDRDKDRDRDRD
RHHRDRHRDRGERREGGRSRDDDDYYRSRDYDRRRDYDKEREDRHRRRSRSRSKGIHEHTSRSPSPTRSRSRSKSKRISGFDMAPPTTAILSGATAAAGT