CuGenDBv2

Gene ID	Cmc03g0070621
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr03:16521249..16523854
RNA-Seq Expression	Cmc03g0070621
Synteny	Cmc03g0070621
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0037291.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.64

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDL+SGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKI+AVTGWT PSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG+    ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRK+SHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGLLFERRLCVPS SAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELLS+A+SSPFSMHPG+TKMYQDLKRVYWW +MKR+VAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFST FHPQTDG+TERLNQVL+DMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPV
        ERRGKLSPRFVGPFEILERIGPV
Subjt:  ERRGKLSPRFVGPFEILERIGPV

KAA0037901.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.29

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGATVFSKIDL+SGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIV+SFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDN+LYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKIEAVTGWT P+TVSEVRSFLGLAGYYRR VENFSRIATPLTQLTRKG     ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSA LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGLLFERRLCV SDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELLS+A+SSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFA NNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVA
        ERRGKLSPRFVGPFEILE+IGP+A
Subjt:  ERRGKLSPRFVGPFEILERIGPVA

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

91.26

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDL+SGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKIEAVTGWT PSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG     ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELLS+A+SSPFSMHPGSTKMY+D+KRVYWW NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWK LQTAMGTRLDFST FHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVA
        ERRGKLSPRF+GPFEILERIGPVA
Subjt:  ERRGKLSPRFVGPFEILERIGPVA

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.66

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDL+SGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKIEAVTGWT PSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG     ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELL +A+SSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVA
        ERRGKLSPRFVGPFEILERIGPVA
Subjt:  ERRGKLSPRFVGPFEILERIGPVA

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.78

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDL+SG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKIEAVTGWT PSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKG     ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELL++A+SSPFSMHPGSTKMYQDLKR+YWW NMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVA
        ERRGKLSPRFVGPFEILERIGPVA
Subjt:  ERRGKLSPRFVGPFEILERIGPVA

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T6R9 Reverse transcriptase

0.0e+00

90.64

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDL+SGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKI+AVTGWT PSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG+    ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRK+SHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGLLFERRLCVPS SAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELLS+A+SSPFSMHPG+TKMYQDLKRVYWW +MKR+VAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFST FHPQTDG+TERLNQVL+DMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPV
        ERRGKLSPRFVGPFEILERIGPV
Subjt:  ERRGKLSPRFVGPFEILERIGPV

A0A5A7T8G8 Reverse transcriptase

0.0e+00

90.29

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKN+YPLP IDDLFDQLQGATVFSKIDL+SGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIV+SFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDN+LYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKIEAVTGWT P+TVSEVRSFLGLAGYYRR VENFSRIATPLTQLTRKG     ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFA KIW HYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSA LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGLLFERRLCV SDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELLS+A+SSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL IPEWKWENVSMDFITGLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQTDGQT RLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFA NNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVA
        ERRGKLSPRFVGPFEILE+IGP+A
Subjt:  ERRGKLSPRFVGPFEILERIGPVA

A0A5A7U330 Reverse transcriptase

0.0e+00

91.26

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDL+SGYHQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKIEAVTGWT PSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG     ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGLLFERRLCVPSDS VKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELLS+A+SSPFSMHPGSTKMY+D+KRVYWW NMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWK LQTAMGTRLDFST FHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEF YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVA
        ERRGKLSPRF+GPFEILERIGPVA
Subjt:  ERRGKLSPRFVGPFEILERIGPVA

A0A5A7UAA8 Reverse transcriptase

0.0e+00

90.66

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDL+SGY+QLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKIEAVTGWT PSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG     ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGL FE RLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELL +A+SSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVS+CLVCQQVK PRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFE+ DKVFLKVAPM+GVLRF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVA
        ERRGKLSPRFVGPFEILERIGPVA
Subjt:  ERRGKLSPRFVGPFEILERIGPVA

A0A5A7UP94 Pol protein

0.0e+00

90.78

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQGATVFSKIDL+SG HQLRIKDEDVPK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE+HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------
        VSVDPAKIEAVTGWT PSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKG     ++                                       
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGAR---------------------------------------

Query:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
               GKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  ------HGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ TLRQRIIDAQSNDPYLVEKRGLAEAG+AVEFSLSSDGGLLFERRLCVPSDSAVKT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERRLCVPSDSAVKT

Query:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT
        ELL++A+SSPFSMHPGSTKMYQDLKR+YWW NMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFI GLPRTLR FTVIWVVVDRLT
Subjt:  ELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVVVDRLT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRL GVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF
        LMEFAYNNSYQATIGMAPFEALY KCCRSP+CWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGV+RF
Subjt:  LMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRF

Query:  ERRGKLSPRFVGPFEILERIGPVA
        ERRGKLSPRFVGPFEILERIGPVA
Subjt:  ERRGKLSPRFVGPFEILERIGPVA

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.9e-121

31.26

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------
         +     I+ V  W  P    E+R FLG   Y R+F+   S++  PL  L +K +                                             
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------

Query:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
          +   +H       V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF
        + +P+D+ +   ++ + +     +HPG   +   + R + W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +   +
Subjt:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP
         +K     G L   +  KL+P F GPF +L++ GP
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP

P0CT35 Transposon Tf2-2 polyprotein

1.9e-121

31.26

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------
         +     I+ V  W  P    E+R FLG   Y R+F+   S++  PL  L +K +                                             
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------

Query:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
          +   +H       V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF
        + +P+D+ +   ++ + +     +HPG   +   + R + W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +   +
Subjt:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP
         +K     G L   +  KL+P F GPF +L++ GP
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP

P0CT36 Transposon Tf2-3 polyprotein

1.9e-121

31.26

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------
         +     I+ V  W  P    E+R FLG   Y R+F+   S++  PL  L +K +                                             
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------

Query:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
          +   +H       V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF
        + +P+D+ +   ++ + +     +HPG   +   + R + W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +   +
Subjt:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP
         +K     G L   +  KL+P F GPF +L++ GP
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP

P0CT37 Transposon Tf2-4 polyprotein

1.9e-121

31.26

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------
         +     I+ V  W  P    E+R FLG   Y R+F+   S++  PL  L +K +                                             
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------

Query:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
          +   +H       V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF
        + +P+D+ +   ++ + +     +HPG   +   + R + W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +   +
Subjt:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP
         +K     G L   +  KL+P F GPF +L++ GP
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP

P0CT41 Transposon Tf2-12 polyprotein

1.9e-121

31.26

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH KH++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------
         +     I+ V  W  P    E+R FLG   Y R+F+   S++  PL  L +K +                                             
Subjt:  VSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGL---------------------------------------------

Query:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
          +   +H       V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  -LLFGARHGK----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    + VE ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLLFERR--

Query:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF
        + +P+D+ +   ++ + +     +HPG   +   + R + W  +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP +   +
Subjt:  LCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRF

Query:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL
          ++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR    
Subjt:  TVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACAL

Query:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV
          P +W  H+ L++ +YNN+  +   M PFE ++      SP+   E+        E  Q T +  Q ++  ++T   + K Y D++ +++ EF+ GD V
Subjt:  EFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG-KCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDL-EFEVGDKV

Query:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP
         +K     G L   +  KL+P F GPF +L++ GP
Subjt:  FLKVAPMRGVLRFERRGKLSPRFVGPFEILERIGP

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

7.0e-23

40.88

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFG
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K  L   
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTSPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFG

Query:  ARHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI
         +  ++ A A + LK      P   L    + F  ++
Subjt:  ARHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAACTGAAAGAATTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAA
GAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAACAAGGTGACCGTAAAGAACAGATATCCCTTGCCCGGGATTGACGATCTATTCGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTGATCTTCAGTCGGGATACCATCAGTTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGGTATGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGA
CGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGAAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGT
TTTGGCTGAAGCAGGTGTCCTTTCTTGGTCACGTGGTTTCTAAGGCTGGGGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACATCACCTTCCACTGTC
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACAAGAAAGGGGCTCCTTTT
GTTTGGAGCAAGGCATGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTT
TGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGG
TGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTAT
TACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACAGTACAGACGACTTTGAGGC
AAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCGAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTTTTA
TTCGAGAGACGCCTCTGTGTGCCGTCGGATAGTGCGGTTAAGACAGAATTATTATCTCAAGCAAACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCA
GGACCTGAAGCGGGTTTATTGGTGGGGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAGATGTTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGG
GTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCGAGAACTCTGAGGCGTTTTACAGTGATTTGGGTTGTG
GTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACTTGGAGTGCC
AGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAACTTTCCATCCACAGA
CTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCT
TATAATAACAGTTATCAGGCTACTATTGGCATGGCACCATTTGAGGCCCTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTGGGGTGAGGTAGGTGAGCAGAGATTGAT
GGGCCCTGAGTTAGTTCAGTCTACCAACGAAGCGATACAGAAGATTAGATCACGTATGCATACCGCTCAGAGTAGACAGAAGAGTTATGCAGATGTGAGGCGGAAGGATC
TTGAATTTGAGGTAGGGGACAAGGTGTTCTTAAAGGTAGCACCTATGAGAGGTGTCTTACGATTTGAGAGGAGGGGAAAGCTGAGTCCCCGTTTTGTTGGGCCGTTTGAG
ATTCTGGAGCGGATTGGTCCTGTAGCGGATTGGTCCTGTAGCTTATCGCTTGGCGTTGCCACCATCACTCTCGACAGTTCACGATGTGTTTCATGTCTCTATGTTGAGGA
AGTACGTGCCAGATCCATCCCATGTAGTGGATTACGAGCCACTGGAGATTGA

mRNA sequence

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Protein sequence

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MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPGIDDLFDQLQGATVFSKIDLQSGYHQLRIKDEDVPKTAFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEKHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTSPSTV
SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGLLLFGARHGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRR
WLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQTTLRQRIIDAQSNDPYLVEKRGLAEAGRAVEFSLSSDGGLL
FERRLCVPSDSAVKTELLSQANSSPFSMHPGSTKMYQDLKRVYWWGNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRRFTVIWVV
VDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLLGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTTFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFA
YNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRLMGPELVQSTNEAIQKIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSPRFVGPFE
ILERIGPVADWSCSLSLGVATITLDSSRCVSCLYVEEVRARSIPCSGLRATGD

Cmc03g0070621 (gene) of Melon (Charmono) v1.1 genome