| GenBank top hits | e value | %identity | Alignment |
|---|
| AAO45752.1 pol protein [Cucumis melo subsp. melo] | 2.4e-176 | 87.91 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHY+FIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDP IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVLTVPDGSG+FVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSHEQNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| KAA0040689.1 pol protein [Cucumis melo var. makuwa] | 1.8e-176 | 88.19 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPS+SPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDPV IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVL VPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSHEQNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| KAA0043391.1 pol protein [Cucumis melo var. makuwa] | 1.4e-176 | 88.19 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDP IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVLTVPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSH+QNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 4.7e-177 | 88.46 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDP IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVLTVPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSHEQNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| TYK01613.1 pol protein [Cucumis melo var. makuwa] | 4.7e-177 | 88.46 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDP IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVLTVPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSHEQNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7THE6 Reverse transcriptase | 8.7e-177 | 88.19 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPS+SPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDPV IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVL VPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSHEQNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| A0A5A7TP96 Reverse transcriptase | 6.7e-177 | 88.19 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDP IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVLTVPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSH+QNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| A0A5A7U330 Reverse transcriptase | 2.3e-177 | 88.46 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDP IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVLTVPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSHEQNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| A0A5A7UC07 Reverse transcriptase | 1.1e-176 | 87.91 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIK+GDV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDP IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVLTVPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSHEQ YPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| A0A5D3BPI1 Reverse transcriptase | 2.3e-177 | 88.46 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
MAPA LKELKVQLQELLDKGFIRPSVSPWGA VLFVKKKDG+MRLCIDYRELNKVTVKNRYPLPRI+DLFDQLQGATVFSKIDLRSGYH+LRIKD DV K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTF+IVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
VSVDP IEAVT W RPSTVSEVRSFLGLA G+ FVWSKACEDSFQ+LKQKLVTAPVLTVPDGSGSFVIYSDASKK L
Subjt: VSVDPV-IEAVTSWPRPSTVSEVRSFLGLA-----------------------GSSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
GCVLMQQGKVVAYASRQLKSHEQNYPTH+LELA VVFALKIWRHYLYGEKIQIFTDHKSLKYFF
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| SwissProt top hits | e value | %identity | Alignment |
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| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.1e-63 | 35.71 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGA-----MRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLKT
+E++ Q+Q++L++G IR S SP+ + + V KK A R+ IDYR+LN++TV +R+P+P ++++ +L F+ IDL G+H++ + V KT
Subjt: KELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGA-----MRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLKT
Query: AFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
AF +++GHYE++ M FGL NAP F MN + R L+ +V++DDI+++S + EH + L +V + L L + KCEF ++ +FLGHV++ G+
Subjt: AFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV
Query: SVDP-VIEAVTSWPRPSTVSEVRSFLGLAG--SSFVWSKA----------------------CEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
+P IEA+ +P P+ E+++FLGL G F+ + A + +F+ LK + P+L VPD + F + +DAS +L
Subjt: SVDP-VIEAVTSWPRPSTVSEVRSFLGLAG--SSFVWSKA----------------------CEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
G VL Q G ++Y SR L HE NY T EL +V+A K +RHYL G +I +DH+ L + +
Subjt: GCVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFF
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| P0CT41 Transposon Tf2-12 polyprotein | 6.7e-57 | 33.79 | Show/hide |
Query: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
+ P ++ + ++ + L G IR S + V+FV KK+G +R+ +DY+ LNK N YPLP I L ++QG+T+F+K+DL+S YH +R++ GD K
Subjt: MAPAVLKELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLK
Query: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
AFR G +E++VM +G++ AP F +N + E ++ ++ ++DDILI+SK+E+EH +H++ VLQ L++ L +KCEF QV F+G+ +S+ G
Subjt: TAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VS-VDPVIEAVTSWPRPSTVSEVRSFLGLAG--SSFV---------------------WSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
+ I+ V W +P E+R FLG F+ W+ + +++KQ LV+ PVL D S ++ +DAS ++
Subjt: VS-VDPVIEAVTSWPRPSTVSEVRSFLGLAG--SSFV---------------------WSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSL
Query: GCVLMQQGK-----VVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYG--EKIQIFTDHKSL
G VL Q+ V Y S ++ + NY + E+ ++ +LK WRHYL E +I TDH++L
Subjt: GCVLMQQGK-----VVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYG--EKIQIFTDHKSL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.3e-65 | 35.99 | Show/hide |
Query: ELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGA-----MRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLKTA
E++ Q+QE+L++G IR S SP+ + V KK A R+ IDYR+LN++T+ +RYP+P ++++ +L F+ IDL G+H++ + + + KTA
Subjt: ELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGA-----MRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLKTA
Query: FRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
F ++ GHYE++ M FGL NAP F MN + R L+ +V++DDI+I+S + EH +++V L D L + KCEF K+ +FLGH+V+ G+
Subjt: FRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
Query: VDPV-IEAVTSWPRPSTVSEVRSFLGLAG--SSFVWSKA----------------------CEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSLG
+P+ ++A+ S+P P+ E+R+FLGL G F+ + A ++F+ LK ++ P+L +PD FV+ +DAS +LG
Subjt: VDPV-IEAVTSWPRPSTVSEVRSFLGLAG--SSFVWSKA----------------------CEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSLG
Query: CVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFN
VL Q G +++ SR L HE NY EL +V+A K +RHYL G + I +DH+ L++ N
Subjt: CVLMQQGKVVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSLKYFFN
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.2e-58 | 35.75 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLKTAFRSR
+E+ +Q+LLD FI PS SP + V+ V KKDG RLC+DYR LNK T+ + +PLPRI++L ++ A +F+ +DL SGYH++ ++ D KTAF +
Subjt: KELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLKTAFRSR
Query: YGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS-VDP
G YE+ VM FGL NAP+ F M FR+ F+ V++DDILI+S++ EH +HL VL+ L++ L K KC+F ++ FLG+ + ++ +
Subjt: YGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS-VDP
Query: VIEAVTSWPRPSTVSEVRSFLGLAG---------------------SSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSLGCVLMQQG
A+ +P P TV + + FLG+ W++ + + + LK L +PVL + ++ + +DASK +G VL +
Subjt: VIEAVTSWPRPSTVSEVRSFLGLAG---------------------SSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSLGCVLMQQG
Query: K------VVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSL
VV Y S+ L+S ++NYP LEL ++ AL +R+ L+G+ + TDH SL
Subjt: K------VVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.6e-58 | 35.75 | Show/hide |
Query: KELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLKTAFRSR
+E+ +Q+LLD FI PS SP + V+ V KKDG RLC+DYR LNK T+ + +PLPRI++L ++ A +F+ +DL SGYH++ ++ D KTAF +
Subjt: KELKVQLQELLDKGFIRPSVSPWGALVLFVKKKDGAMRLCIDYRELNKVTVKNRYPLPRINDLFDQLQGATVFSKIDLRSGYHELRIKDGDVLKTAFRSR
Query: YGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS-VDP
G YE+ VM FGL NAP+ F M FR+ F+ V++DDILI+S++ EH +HL VL+ L++ L K KC+F ++ FLG+ + ++ +
Subjt: YGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFLIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVS-VDP
Query: VIEAVTSWPRPSTVSEVRSFLGLAG---------------------SSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSLGCVLMQQG
A+ +P P TV + + FLG+ W++ + + LK L +PVL + ++ + +DASK +G VL +
Subjt: VIEAVTSWPRPSTVSEVRSFLGLAG---------------------SSFVWSKACEDSFQSLKQKLVTAPVLTVPDGSGSFVIYSDASKKSLGCVLMQQG
Query: K------VVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSL
VV Y S+ L+S ++NYP LEL ++ AL +R+ L+G+ + TDH SL
Subjt: K------VVAYASRQLKSHEQNYPTHNLELAVVVFALKIWRHYLYGEKIQIFTDHKSL
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