| GenBank top hits | e value | %identity | Alignment |
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| AQY61295.1 Pol [Coffea arabica] | 8.8e-80 | 77.08 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLD KD FRP+E+NEE+LGPEVPYLSAIGALMYLAN TRPDI+F+VNLLAR+SSS RHWNG+KH+ RYL+GTID+ LFYSNKS +LVGYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSK-NLPTILFEDNTACIAQIKG
YLSDPHKARSQT YLFT GGTAISW+S KQ++ ATSSNHAEI+AIHE+SRECV LRSMTH+I++ CGLS K N PTIL+EDN ACIAQ+KG
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSK-NLPTILFEDNTACIAQIKG
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| ERM98543.1 hypothetical protein AMTR_s04311p00004950, partial [Amborella trichopoda] | 1.4e-80 | 77.49 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDV+KD FRP+E++EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLAR+SS+ RHW G+KH+LRYL+GTID LFYSN L+GYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
YLSDPHKARSQT YLFTCG TAISW+S KQT+ ATSSNHAEILAIHE+SRECV LRSMT HI+ TCGL+ +K +PTIL+EDN ACIAQ+KG
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| KAA0067250.1 Pol [Cucumis melo var. makuwa] | 1.3e-94 | 92.67 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDVKKDIFRP+EDNEELLGPEVPYLSAIGALM LANNTRPDIAFSVNLLARYSSS +RHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
YLSDP KARSQ YLFT GGTAISW+SVKQTMTATSSNHAEILAIHE SRECV LRSMTHHI+ETCGLSFSKNLPTILFEDNTACIAQIKG
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| KAF7137709.1 hypothetical protein RHSIM_Rhsim07G0041900 [Rhododendron simsii] | 5.1e-80 | 76.44 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDV KD FRP E+ E++LGPEVPY+SAIGALMYLAN TRPDIAFSVNLLARYSS+ +RHW G+KH+ RYLRGTID+ LFYSN S L+GYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
YLSDPHKARSQT Y+FTCGG AISW+SVKQT+TATSSNH+EI+AIHE+SRECV LRSM HI+E CGLS K+ PTIL+EDN ACI QIKG
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| TYK21506.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.5e-95 | 91.62 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDVKKDIFRP+EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYS S +RHWNGVKHVLRYLRGTIDM LFYSNKSNFDLVGYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
+LSDPHKARSQT YLFTC GTAISW+SVKQTMTATSSNHAEILAIHE+SRECV LRSMTH+I+ETCGLSFSKNLPTILFEDNTACI QIKG
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FK49 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.3e-81 | 80.63 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDVKKD FRPQE EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+ RHWNGVKHVLRYLRGT DM LFY NKSN LVGYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
YLSDPHK RSQT YLFTCG TAISW+SVKQT++ATSSNH+EI+AIHE+SRECV LRS+ HIQE CGLS K+ PTIL+EDN ACI QI+G
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| A0A2N9I099 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.3e-81 | 80.63 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDVKKD FRPQE EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+ RHWNGVKHVLRYLRGT DM LFY NKSN LVGYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
YLSDPHK RSQT YLFTCG TAISW+SVKQT++ATSSNH+EI+AIHE+SRECV LRS+ HIQE CGLS K+ PTIL+EDN ACI QI+G
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| A0A2N9J4G7 Reverse transcriptase Ty1/copia-type domain-containing protein | 1.3e-81 | 80.63 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDVKKD FRPQE EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+ RHWNGVKHVLRYLRGT DM LFY NKSN LVGYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
YLSDPHK RSQT YLFTCG TAISW+SVKQT++ATSSNH+EI+AIHE+SRECV LRS+ HIQE CGLS K+ PTIL+EDN ACI QI+G
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| A0A5D3CKU4 Pol | 6.1e-95 | 92.67 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDVKKDIFRP+EDNEELLGPEVPYLSAIGALM LANNTRPDIAFSVNLLARYSSS +RHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
YLSDP KARSQ YLFT GGTAISW+SVKQTMTATSSNHAEILAIHE SRECV LRSMTHHI+ETCGLSFSKNLPTILFEDNTACIAQIKG
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| A0A5D3DD63 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.2e-95 | 91.62 | Show/hide |
Query: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
+VRSLDVKKDIFRP+EDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYS S +RHWNGVKHVLRYLRGTIDM LFYSNKSNFDLVGYADAG
Subjt: MVRSLDVKKDIFRPQEDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAG
Query: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
+LSDPHKARSQT YLFTC GTAISW+SVKQTMTATSSNHAEILAIHE+SRECV LRSMTH+I+ETCGLSFSKNLPTILFEDNTACI QIKG
Subjt: YLSDPHKARSQTDYLFTCGGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIAQIKG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.7e-22 | 35.36 | Show/hide |
Query: PQEDNEELLGPE----VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFD--LVGYADAGYLSDPHK
P + N ELL + P S IG LMY+ TRPD+ +VN+L+RYSS W +K VLRYL+GTIDM L + F+ ++GY D+ +
Subjt: PQEDNEELLGPE----VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFD--LVGYADAGYLSDPHK
Query: ARSQTDYLFTC-GGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIA
+S T YLF I W + +Q A SS AE +A+ E+ RE + L+ + ++ P ++EDN CI+
Subjt: ARSQTDYLFTC-GGTAISWQSVKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACIA
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| P0CV72 Secreted RxLR effector protein 161 | 7.1e-24 | 42.54 | Show/hide |
Query: VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISW
VPYLSA+GA+MYL TRPD+A +V +L++++S HW +K VLRYL+ T L ++ LVGY+DA + D RS + YLF G +SW
Subjt: VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISW
Query: QSVKQTMTATSSNHAEILAIHESSRECVLLRSMT
+S KQ A SS E +A+ E+++E V L T
Subjt: QSVKQTMTATSSNHAEILAIHESSRECVLLRSMT
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-21 | 43.94 | Show/hide |
Query: EVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAIS
+VPY SA+G+LMY TRPDIA +V +++R+ + + HW VK +LRYLRGT L + S+ L GY DA D +S T YLFT G AIS
Subjt: EVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAIS
Query: WQSVKQTMTATSSNHAEILAIHESSRECVLLR
WQS Q A S+ AE +A E+ +E + L+
Subjt: WQSVKQTMTATSSNHAEILAIHESSRECVLLR
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| P25600 Putative transposon Ty5-1 protein YCL074W | 3.4e-10 | 32.54 | Show/hide |
Query: PYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISWQ
PY S +G L++ AN RPDI++ V+LL+R+ H + VLRYL T M L Y + S L Y DA + + S Y+ G ++W
Subjt: PYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISWQ
Query: SVK-QTMTATSSNHAEILAIHESSRE
S K + + S AE + E+ E
Subjt: SVK-QTMTATSSNHAEILAIHESSRE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.4e-17 | 34.19 | Show/hide |
Query: YLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISWQS
Y +G+L YLA TRPD++++VN L++Y + HWN +K VLRYL GT D +F + L Y+DA + D S Y+ G ISW S
Subjt: YLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISWQS
Query: VKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDN
KQ SS AE ++ +S E + S+ + G+ S P +++ DN
Subjt: VKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDN
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.9e-19 | 37.74 | Show/hide |
Query: YLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISWQS
Y IG LMYL TR DI+F+VN L+++S + H V +L Y++GT+ LFYS+++ L ++DA + S RS Y G + ISW+S
Subjt: YLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISWQS
Query: VKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACI
KQ + + SS AE A+ ++ E + L +Q L SK PT+LF DNTA I
Subjt: VKQTMTATSSNHAEILAIHESSRECVLLRSMTHHIQETCGLSFSKNLPTILFEDNTACI
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 1.0e-09 | 40.51 | Show/hide |
Query: MYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDY
MYL TRPD+ F+VN L+++SS+ V VL Y++GT+ LFYS S+ L +AD+ + S P RS T +
Subjt: MYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDY
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 2.1e-10 | 29.84 | Show/hide |
Query: YLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISWQS
+ S +GAL YL TRPDI+++VN++ + ++ +K VLRY++GTI L+ S ++ + D+ + RS T + G ISW +
Subjt: YLSAIGALMYLANNTRPDIAFSVNLLARYSSSQIERHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVGYADAGYLSDPHKARSQTDYLFTCGGTAISWQS
Query: VKQTMTATSSNHAEILAIHESSRE
+Q + SS E A+ ++ E
Subjt: VKQTMTATSSNHAEILAIHESSRE
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