| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037369.1 pol protein [Cucumis melo var. makuwa] | 3.7e-189 | 83.04 | Show/hide |
Query: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
+GLEVEPLGS+LSVSTPSG V+LSK++IKAC+V +ANHMLDVTLLVLDMQDFDVILGM+W+ ANHA+IDCF KEVVFNPPS SFKF+ GIVC+PKVIS
Subjt: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
Query: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
A+KASKLL+QGTWGILASVVD REPEVSLSS+ VVREYP+VFPDELP LPP REVDFAIELEP PISRAPYRMAPAELKELK+QLQ+LLD GFIRPSV
Subjt: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
Query: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
SPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNRYPLP + + VFSKIDLR GYHQLRIRD D PKTAFRSRYGHYEF+VMSFGLT APAVF
Subjt: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Query: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
MDLMNR+FKDFLD F IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLYAKFSKCEFW +KV+FLGHVVSSEGVSV P KIE VT+WPRPSTVSEIRS
Subjt: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
Query: L
L
Subjt: L
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| KAA0045265.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.8e-220 | 98.48 | Show/hide |
Query: VEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVISALKA
VEPLGSILSVST SGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFA+HASIDCFRKEVVFNP SRTSFKFKRAGIVCVPKVISALKA
Subjt: VEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVISALKA
Query: SKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWG
SKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVF DELPRLPPIR VDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWG
Subjt: SKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWG
Query: APVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCKERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN
APVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCKERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN
Subjt: APVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCKERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN
Query: RVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
RVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVG VKIEVVTSWPRPSTVSEIRSLL
Subjt: RVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
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| KAA0056047.1 reverse transcriptase [Cucumis melo var. makuwa] | 6.3e-189 | 83.04 | Show/hide |
Query: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
+GLEVEPL S+LSVSTPSG V+LSK+KIKAC+V +ANH+LDVTLLVLDMQDFDVILG +W+ ANHA+IDCF KEVVFNPPS TSFKF+RAGIVC+PKVIS
Subjt: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
Query: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
A+KASKLLNQGTWGIL SVVDTREPEVSLSS+ VVREYP+VFPDELP LPP RE+DFAIELEP PISRAPYRMAP ELKELK+QLQ+LLD GFIRPSV
Subjt: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
Query: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
SPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNRYPLP + + VFSKIDL+ GYHQLRIRDSD PKTAFRSRY HYEFIVMSFGLTNAPAVF
Subjt: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Query: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
MDLMNRVFKDFLD F IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLY KFSKCEFW KKV+FLGHVVSSEGVS+ P KIE VT+WPRPSTVSEI+S
Subjt: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
Query: L
L
Subjt: L
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| KAA0060745.1 pol protein [Cucumis melo var. makuwa] | 6.3e-189 | 83.04 | Show/hide |
Query: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
+GL+VEPLGS+LSVSTPSG V+LSK++IKAC+V +AN MLDVTLLVLDMQDFDVILGM+W+ ANHA+IDCF KEVVFNPPS SFKF+ AG+VC+PKVIS
Subjt: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
Query: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
A+KASKLL+QGTWGILASVVD REPEVSLSS+ VVREYP+VFPDELP LPP REVDFAIELEP PISRAPYRMAPAELKELK+QLQ+LLD GFIRPSV
Subjt: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
Query: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
SPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNRYPLP + + VFSKIDLR GYHQLRIRD D PKTAFRSRYGHYEF+VMSFGLTNAPAVF
Subjt: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Query: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
MDLMNRVFKDFLD F IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLYAKFSKCEFW +KV+FLGHVVSSEGVSV P KIE VT+WPRPSTVSEIRS
Subjt: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
Query: L
L
Subjt: L
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| TYK01306.1 pol protein [Cucumis melo var. makuwa] | 1.3e-189 | 83.54 | Show/hide |
Query: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
+GLEVEPLGS+LSVSTPSG V+LSK++IKAC+V +ANHML+VTLLVLDMQDFDVILGM+W+ ANHA+IDCF KEVVFNPPS SFKF+ AG+VC+PKVIS
Subjt: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
Query: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
A+KASKLL+QGTWGILASVVD REPEVSLSS+ VVREYP+VFPDELP LPP REVDFAIELEP PISRAPYRMAPAELKELK+QLQ+LLD GFIRPSV
Subjt: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
Query: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
SPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNRYPLP + + VFSKIDLR GYHQLRIRDSD PKTAFR RYGHYEFIVMSFGLTNAPAVF
Subjt: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Query: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
MDLMNRVFKDFLD F IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLYAKFSKCEFW +KV+FLGHVVSSEGVSV P KIE VT+WPRPSTVSEIRS
Subjt: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
Query: L
L
Subjt: L
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T7M0 Reverse transcriptase | 1.8e-189 | 83.04 | Show/hide |
Query: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
+GLEVEPLGS+LSVSTPSG V+LSK++IKAC+V +ANHMLDVTLLVLDMQDFDVILGM+W+ ANHA+IDCF KEVVFNPPS SFKF+ GIVC+PKVIS
Subjt: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
Query: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
A+KASKLL+QGTWGILASVVD REPEVSLSS+ VVREYP+VFPDELP LPP REVDFAIELEP PISRAPYRMAPAELKELK+QLQ+LLD GFIRPSV
Subjt: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
Query: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
SPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNRYPLP + + VFSKIDLR GYHQLRIRD D PKTAFRSRYGHYEF+VMSFGLT APAVF
Subjt: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Query: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
MDLMNR+FKDFLD F IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLYAKFSKCEFW +KV+FLGHVVSSEGVSV P KIE VT+WPRPSTVSEIRS
Subjt: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
Query: L
L
Subjt: L
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| A0A5A7TV58 Reverse transcriptase | 8.9e-221 | 98.48 | Show/hide |
Query: VEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVISALKA
VEPLGSILSVST SGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFA+HASIDCFRKEVVFNP SRTSFKFKRAGIVCVPKVISALKA
Subjt: VEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVISALKA
Query: SKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWG
SKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVF DELPRLPPIR VDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWG
Subjt: SKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWG
Query: APVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCKERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN
APVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCKERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN
Subjt: APVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCKERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN
Query: RVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
RVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVG VKIEVVTSWPRPSTVSEIRSLL
Subjt: RVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
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| A0A5A7UN68 Reverse transcriptase | 3.1e-189 | 83.04 | Show/hide |
Query: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
+GLEVEPL S+LSVSTPSG V+LSK+KIKAC+V +ANH+LDVTLLVLDMQDFDVILG +W+ ANHA+IDCF KEVVFNPPS TSFKF+RAGIVC+PKVIS
Subjt: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
Query: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
A+KASKLLNQGTWGIL SVVDTREPEVSLSS+ VVREYP+VFPDELP LPP RE+DFAIELEP PISRAPYRMAP ELKELK+QLQ+LLD GFIRPSV
Subjt: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
Query: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
SPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNRYPLP + + VFSKIDL+ GYHQLRIRDSD PKTAFRSRY HYEFIVMSFGLTNAPAVF
Subjt: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Query: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
MDLMNRVFKDFLD F IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLY KFSKCEFW KKV+FLGHVVSSEGVS+ P KIE VT+WPRPSTVSEI+S
Subjt: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
Query: L
L
Subjt: L
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| A0A5A7V4E4 Reverse transcriptase | 3.1e-189 | 83.04 | Show/hide |
Query: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
+GL+VEPLGS+LSVSTPSG V+LSK++IKAC+V +AN MLDVTLLVLDMQDFDVILGM+W+ ANHA+IDCF KEVVFNPPS SFKF+ AG+VC+PKVIS
Subjt: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
Query: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
A+KASKLL+QGTWGILASVVD REPEVSLSS+ VVREYP+VFPDELP LPP REVDFAIELEP PISRAPYRMAPAELKELK+QLQ+LLD GFIRPSV
Subjt: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
Query: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
SPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNRYPLP + + VFSKIDLR GYHQLRIRD D PKTAFRSRYGHYEF+VMSFGLTNAPAVF
Subjt: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Query: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
MDLMNRVFKDFLD F IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLYAKFSKCEFW +KV+FLGHVVSSEGVSV P KIE VT+WPRPSTVSEIRS
Subjt: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
Query: L
L
Subjt: L
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| A0A5D3BSV9 Reverse transcriptase | 6.2e-190 | 83.54 | Show/hide |
Query: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
+GLEVEPLGS+LSVSTPSG V+LSK++IKAC+V +ANHML+VTLLVLDMQDFDVILGM+W+ ANHA+IDCF KEVVFNPPS SFKF+ AG+VC+PKVIS
Subjt: MGLEVEPLGSILSVSTPSGAVMLSKDKIKACQVGVANHMLDVTLLVLDMQDFDVILGMEWMFANHASIDCFRKEVVFNPPSRTSFKFKRAGIVCVPKVIS
Query: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
A+KASKLL+QGTWGILASVVD REPEVSLSS+ VVREYP+VFPDELP LPP REVDFAIELEP PISRAPYRMAPAELKELK+QLQ+LLD GFIRPSV
Subjt: ALKASKLLNQGTWGILASVVDTREPEVSLSSDSVVREYPNVFPDELPRLPPIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSV
Query: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
SPWGAPVLFVKKKDG MRLCIDYRELNKVTVKNRYPLP + + VFSKIDLR GYHQLRIRDSD PKTAFR RYGHYEFIVMSFGLTNAPAVF
Subjt: SPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVF
Query: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
MDLMNRVFKDFLD F IVFIDDIL+YSKTE EHE+HLHQVL TLRANKLYAKFSKCEFW +KV+FLGHVVSSEGVSV P KIE VT+WPRPSTVSEIRS
Subjt: MDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSL
Query: L
L
Subjt: L
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 2.1e-41 | 32.38 | Show/hide |
Query: REPEVSLSSDSVVREYPNVFPD-ELPRLP-PIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWGAPVLFVKKKDGLMRLC
+EPE+ + +E+ ++ + +LP PI+ ++F +EL + + + Y + P +++ + ++ + L G IR S + PV+FV KK+G +R+
Subjt: REPEVSLSSDSVVREYPNVFPD-ELPRLP-PIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWGAPVLFVKKKDGLMRLC
Query: IDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDMFFIVFI
+DY+ LNK N YPLP + L + +F+K+DL+ YH +R+R D K AFR G +E++VM +G++ APA F +N + + + + ++
Subjt: IDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDMFFIVFI
Query: DDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
DDIL++SK+E EH H+ VL L+ L +KCEF Q +V F+G+ +S +G + I+ V W +P E+R L
Subjt: DDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
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| P0CT41 Transposon Tf2-12 polyprotein | 2.1e-41 | 32.38 | Show/hide |
Query: REPEVSLSSDSVVREYPNVFPD-ELPRLP-PIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWGAPVLFVKKKDGLMRLC
+EPE+ + +E+ ++ + +LP PI+ ++F +EL + + + Y + P +++ + ++ + L G IR S + PV+FV KK+G +R+
Subjt: REPEVSLSSDSVVREYPNVFPD-ELPRLP-PIREVDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWGAPVLFVKKKDGLMRLC
Query: IDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDMFFIVFI
+DY+ LNK N YPLP + L + +F+K+DL+ YH +R+R D K AFR G +E++VM +G++ APA F +N + + + + ++
Subjt: IDYRELNKVTVKNRYPLPGLTTCLTSCK-ERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDMFFIVFI
Query: DDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
DDIL++SK+E EH H+ VL L+ L +KCEF Q +V F+G+ +S +G + I+ V W +P E+R L
Subjt: DDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.3e-43 | 37.08 | Show/hide |
Query: PISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWGAPVLFVKKKD-----GLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSC-KERVFSKIDLRLG
PI Y +A E++ Q+Q++L+ G IR S SP+ +P V KK R+ IDYR+LN++T+ +RYP+P + L K + F+ IDL G
Subjt: PISRAPYRMAPAELKELKIQLQKLLDMGFIRPSVSPWGAPVLFVKKKD-----GLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSC-KERVFSKIDLRLG
Query: YHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQK
+HQ+ + + KTAF ++ GHYE++ M FGL NAPA F MN + + L+ +V++DDI+++S + EH + + V L L + KCEF +K
Subjt: YHQLRIRDSDTPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQK
Query: KVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
+ +FLGH+V+ +G+ P+K++ + S+P P+ EIR+ L
Subjt: KVSFLGHVVSSEGVSVGPVKIEVVTSWPRPSTVSEIRSLL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 3.8e-43 | 34.08 | Show/hide |
Query: KASKLLNQGTWGILASVVDTREPEVSLSSDS---------VVREYPNVFPDELPRLPPIRE---VDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKL
+AS L G + + S + + EP + S+ + ++Y + ++LP P V IE++P PY + +E+ +QKL
Subjt: KASKLLNQGTWGILASVVDTREPEVSLSSDS---------VVREYPNVFPDELPRLPPIRE---VDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKL
Query: LDMGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSC-KERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMS
LD FI PS SP +PV+ V KKDG RLC+DYR LNK T+ + +PLP + L+ ++F+ +DL GYHQ+ + D KTAF + G YE+ VM
Subjt: LDMGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSC-KERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMS
Query: FGLTNAPAVFMDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPR
FGL NAP+ F M F+D F V++DDIL++S++ EH HL VL L+ L K KC+F ++ FLG+ + + ++ K + +P
Subjt: FGLTNAPAVFMDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPR
Query: PSTVSEIRSLL
P TV + + L
Subjt: PSTVSEIRSLL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 3.8e-43 | 34.08 | Show/hide |
Query: KASKLLNQGTWGILASVVDTREPEVSLSSDS---------VVREYPNVFPDELPRLPPIRE---VDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKL
+AS L G + + S + + EP + S+ + ++Y + ++LP P V IE++P PY + +E+ +QKL
Subjt: KASKLLNQGTWGILASVVDTREPEVSLSSDS---------VVREYPNVFPDELPRLPPIRE---VDFAIELEPDIFPISRAPYRMAPAELKELKIQLQKL
Query: LDMGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSC-KERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMS
LD FI PS SP +PV+ V KKDG RLC+DYR LNK T+ + +PLP + L+ ++F+ +DL GYHQ+ + D KTAF + G YE+ VM
Subjt: LDMGFIRPSVSPWGAPVLFVKKKDGLMRLCIDYRELNKVTVKNRYPLPGLTTCLTSC-KERVFSKIDLRLGYHQLRIRDSDTPKTAFRSRYGHYEFIVMS
Query: FGLTNAPAVFMDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPR
FGL NAP+ F M F+D F V++DDIL++S++ EH HL VL L+ L K KC+F ++ FLG+ + + ++ K + +P
Subjt: FGLTNAPAVFMDLMNRVFKDFLDMFFIVFIDDILVYSKTEVEHEDHLHQVLGTLRANKLYAKFSKCEFWQKKVSFLGHVVSSEGVSVGPVKIEVVTSWPR
Query: PSTVSEIRSLL
P TV + + L
Subjt: PSTVSEIRSLL
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