; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0071241 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0071241
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
Genome locationCMiso1.1chr03:17428433..17429392
RNA-Seq ExpressionCmc03g0071241
SyntenyCmc03g0071241
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO73529.1 gag-pol polyprotein [Glycine max]1.1e-7749.68Show/hide
Query:  YLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSR
        +L+ +GY +G  +KTLF+ +    L++AQIYV+DI+FGG   +++ +F+  M+ EFEMS+VGEL+ FLGLQ+KQ  + IF SQ KYAKNI+KKFG+E + 
Subjt:  YLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSR

Query:  HKRTPAVTHVKITKDTEGARADHKLYISII---------------------------------------------------------------------G
        HKRTPA TH+K++KD  G   D  LY S+I                                                                     G
Subjt:  HKRTPAVTHVKITKDTEGARADHKLYISII---------------------------------------------------------------------G

Query:  SSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRE
        S+DDRKSTS GCF+LGNNLISWFSKKQN VSLST EAEYIAAGS+C+QL+WMK ML EY   QD+MTLYC NMS I+ISKNPVQ+S+TKHI+IRHH+IRE
Subjt:  SSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRE

Query:  LVENKIIKLDHI
        LV++K+I L+H+
Subjt:  LVENKIIKLDHI

KAA0066405.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.3e-7857.64Show/hide
Query:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS
        +YL  KGYSRGE +KTLFI+R ++QL+V QIYV+DIIFGG PQDLV NFI+IM+ EF+MSMVGELSCFLGLQIKQ ++ IF SQEKY +N++KKFGLEQ+
Subjt:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS

Query:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS------------------------------------------SD--DRKSTSRGCFFLGNNLISWFS
        R+KRTPAVTHVK+TKDTE A  DHKLY SIIGS                                          SD     S       +G     W  
Subjt:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS------------------------------------------SD--DRKSTSRGCFFLGNNLISWFS

Query:  KKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHI
           +  + S  EAEYIAAGS CTQLIW KNML EYGF QD MTLYC NMS IDIS NPVQ+S+T+HI+IRHHFI ELV++K+IKLDHI
Subjt:  KKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHI

KAA0066740.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.6e-8159.79Show/hide
Query:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS
        +YL  KGYSRGE +KTLFIHR ++QL+VAQIYV+DIIFGG PQDLV NFI+IM+ EFEMSMVGEL CFLGLQI+QK++ IF SQ+KYA+NI+KKFGLEQ+
Subjt:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS

Query:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS------SDDRKSTSRGCFF------------LGNNLISWFSKKQNF---VSLSTT------------
        R+KRTPA THVK+TKD EGA  DHKLY SI+GS      S    + + G +                 ++ +  +  +F    S  TT            
Subjt:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS------SDDRKSTSRGCFF------------LGNNLISWFSKKQNF---VSLSTT------------

Query:  --------EAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHIR
                EAEYIAAGS CTQLIWMKN+LHEYGF QD MTLYC NMS IDISKN VQ+S+TKHI+IRHHFIRE VE K+IKLDHIR
Subjt:  --------EAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHIR

TYK18151.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.5e-8263.98Show/hide
Query:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS
        +YL  +GYSRGE +KTLFIHR ++QL+VAQIYV+DIIFGG PQDLV NFI+IM+PEFEMSMVGELSCFLGLQIKQK+ GIF  QEKYA+N++KKFGLEQ+
Subjt:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS

Query:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS----SDDRKSTSR-----GCFFLGNNL-------ISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWM
        R+KRTPA    K+TKDTEGA  DHKLY SI+GS    +  R   +       C+     +       I   + +   + +   EAEYIAAGS CTQLIWM
Subjt:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS----SDDRKSTSR-----GCFFLGNNL-------ISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWM

Query:  KNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHIR
        KNML EYGF QD MTLYC NMS IDISKN +Q+S+TKHI+IRHHFI+ELVE+K+IKLDHIR
Subjt:  KNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHIR

TYK23188.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.9e-9158.6Show/hide
Query:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS
        +YL  KGYSRGE +KTLFIHR ++QL+VAQIYV+DIIFGG P DLV NFI+IM+ EFEMSMVGELSCFLG QIKQK++ I  SQ+KYAKN+ KKFGLEQ+
Subjt:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS

Query:  RHKRTPAVTHVKITKDTEGARADHKLYISII---------------------------------------------------------------------
        R+KRTPA THVK+T+D +GA  DHKLY SI+                                                                     
Subjt:  RHKRTPAVTHVKITKDTEGARADHKLYISII---------------------------------------------------------------------

Query:  GSSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR
        G +DDRKSTS GCFFLGNNLI W SKKQN VSLSTTEAEYI AGS CTQLIWM+N+L EYGF Q  +TLY  NMS IDISKNPVQ+S+ KHI+IRHHFIR
Subjt:  GSSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR

Query:  ELVENKIIKLDHIR
        ELVE+K+I+LDHIR
Subjt:  ELVENKIIKLDHIR

TrEMBL top hitse value%identityAlignment
A0A5D3BPB5 Gag-pol polyprotein6.2e-7957.64Show/hide
Query:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS
        +YL  KGYSRGE +KTLFI+R ++QL+V QIYV+DIIFGG PQDLV NFI+IM+ EF+MSMVGELSCFLGLQIKQ ++ IF SQEKY +N++KKFGLEQ+
Subjt:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS

Query:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS------------------------------------------SD--DRKSTSRGCFFLGNNLISWFS
        R+KRTPAVTHVK+TKDTE A  DHKLY SIIGS                                          SD     S       +G     W  
Subjt:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS------------------------------------------SD--DRKSTSRGCFFLGNNLISWFS

Query:  KKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHI
           +  + S  EAEYIAAGS CTQLIW KNML EYGF QD MTLYC NMS IDIS NPVQ+S+T+HI+IRHHFI ELV++K+IKLDHI
Subjt:  KKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHI

A0A5D3D1M6 Gag-pol polyprotein1.2e-8263.98Show/hide
Query:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS
        +YL  +GYSRGE +KTLFIHR ++QL+VAQIYV+DIIFGG PQDLV NFI+IM+PEFEMSMVGELSCFLGLQIKQK+ GIF  QEKYA+N++KKFGLEQ+
Subjt:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS

Query:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS----SDDRKSTSR-----GCFFLGNNL-------ISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWM
        R+KRTPA    K+TKDTEGA  DHKLY SI+GS    +  R   +       C+     +       I   + +   + +   EAEYIAAGS CTQLIWM
Subjt:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS----SDDRKSTSR-----GCFFLGNNL-------ISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWM

Query:  KNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHIR
        KNML EYGF QD MTLYC NMS IDISKN +Q+S+TKHI+IRHHFI+ELVE+K+IKLDHIR
Subjt:  KNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHIR

A0A5D3DI97 Gag-pol polyprotein1.4e-9158.6Show/hide
Query:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS
        +YL  KGYSRGE +KTLFIHR ++QL+VAQIYV+DIIFGG P DLV NFI+IM+ EFEMSMVGELSCFLG QIKQK++ I  SQ+KYAKN+ KKFGLEQ+
Subjt:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS

Query:  RHKRTPAVTHVKITKDTEGARADHKLYISII---------------------------------------------------------------------
        R+KRTPA THVK+T+D +GA  DHKLY SI+                                                                     
Subjt:  RHKRTPAVTHVKITKDTEGARADHKLYISII---------------------------------------------------------------------

Query:  GSSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR
        G +DDRKSTS GCFFLGNNLI W SKKQN VSLSTTEAEYI AGS CTQLIWM+N+L EYGF Q  +TLY  NMS IDISKNPVQ+S+ KHI+IRHHFIR
Subjt:  GSSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR

Query:  ELVENKIIKLDHIR
        ELVE+K+I+LDHIR
Subjt:  ELVENKIIKLDHIR

A0A5D3DWS6 Gag-pol polyprotein1.7e-8159.79Show/hide
Query:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS
        +YL  KGYSRGE +KTLFIHR ++QL+VAQIYV+DIIFGG PQDLV NFI+IM+ EFEMSMVGEL CFLGLQI+QK++ IF SQ+KYA+NI+KKFGLEQ+
Subjt:  IYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQS

Query:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS------SDDRKSTSRGCFF------------LGNNLISWFSKKQNF---VSLSTT------------
        R+KRTPA THVK+TKD EGA  DHKLY SI+GS      S    + + G +                 ++ +  +  +F    S  TT            
Subjt:  RHKRTPAVTHVKITKDTEGARADHKLYISIIGS------SDDRKSTSRGCFF------------LGNNLISWFSKKQNF---VSLSTT------------

Query:  --------EAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHIR
                EAEYIAAGS CTQLIWMKN+LHEYGF QD MTLYC NMS IDISKN VQ+S+TKHI+IRHHFIRE VE K+IKLDHIR
Subjt:  --------EAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHIR

Q84VH6 Gag-pol polyprotein5.2e-7849.68Show/hide
Query:  YLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSR
        +L+ +GY +G  +KTLF+ +    L++AQIYV+DI+FGG   +++ +F+  M+ EFEMS+VGEL+ FLGLQ+KQ  + IF SQ KYAKNI+KKFG+E + 
Subjt:  YLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSR

Query:  HKRTPAVTHVKITKDTEGARADHKLYISII---------------------------------------------------------------------G
        HKRTPA TH+K++KD  G   D  LY S+I                                                                     G
Subjt:  HKRTPAVTHVKITKDTEGARADHKLYISII---------------------------------------------------------------------G

Query:  SSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRE
        S+DDRKSTS GCF+LGNNLISWFSKKQN VSLST EAEYIAAGS+C+QL+WMK ML EY   QD+MTLYC NMS I+ISKNPVQ+S+TKHI+IRHH+IRE
Subjt:  SSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRE

Query:  LVENKIIKLDHI
        LV++K+I L+H+
Subjt:  LVENKIIKLDHI

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.3e-1925.17Show/hide
Query:  NQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSRHKRTP---AVTHVKITKDTE--
        N+ I   +YV+D++        + NF   +  +F M+ + E+  F+G++I+ + + I+ SQ  Y K I+ KF +E      TP    + +  +  D +  
Subjt:  NQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSRHKRTP---AVTHVKITKDTE--

Query:  ---------------GARADHKLYISII---------------------------------------------------GSSDDRKSTSRGCFFLGN-NL
                         R D    ++I+                                                   GS  DRKST+   F + + NL
Subjt:  ---------------GARADHKLYISII---------------------------------------------------GSSDDRKSTSRGCFFLGN-NL

Query:  ISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGF-TQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHI
        I W +K+QN V+ S+TEAEY+A   A  + +W+K +L       ++ + +Y  N   I I+ NP  + + KHI+I++HF RE V+N +I L++I
Subjt:  ISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGF-TQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIRELVENKIIKLDHI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.6e-2145.45Show/hide
Query:  GSSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR
        G  D+RKS++   F      ISW SK Q  V+LSTTEAEYIAA     ++IW+K  L E G  Q    +YC + S ID+SKN + +++TKHI++R+H+IR
Subjt:  GSSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR

Query:  ELVENKIIKL
        E+V+++ +K+
Subjt:  ELVENKIIKL

P92519 Uncharacterized mitochondrial protein AtMg008103.1e-1127.6Show/hide
Query:  IYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSRHKRTP------------------------
        +YV+DI+  GS   L+   I  +   F M  +G +  FLG+QIK    G+F SQ KYA+ I+   G+   +   TP                        
Subjt:  IYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSRHKRTP------------------------

Query:  -AVTHVKITKDT-------------EGARAD----------------HKLYI--------------SIIGSSDDRKSTSRGCFFLGNNLISWFSKKQNFV
         A+ ++ +T+               E   AD                H LYI                 G +  R+ST+  C FLG N+ISW +K+Q  V
Subjt:  -AVTHVKITKDT-------------EGARAD----------------HKLYI--------------SIIGSSDDRKSTSRGCFFLGNNLISWFSKKQNFV

Query:  SLSTTEAEYIAAGSACTQLIW
        S S+TE EY A      +L W
Subjt:  SLSTTEAEYIAAGSACTQLIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.5e-1823.32Show/hide
Query:  YLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSR
        YL   G+    ++ +LF+ +    ++   +YV+DI+  G+   L+ N +D +   F +    EL  FLG++ K+   G+  SQ +Y  +++ +  +  ++
Subjt:  YLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSR

Query:  HKRTPAVTHVKITKDTEGARADHKLYISIIGS--------------------------------------------------------------------
           TP     K++  +     D   Y  I+GS                                                                    
Subjt:  HKRTPAVTHVKITKDTEGARADHKLYISIIGS--------------------------------------------------------------------

Query:  -SDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGF-TQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR
          DD  ST+    +LG++ ISW SKKQ  V  S+TEAEY +  +  +++ W+ ++L E G        +YC N+    +  NPV +S+ KHI I +HFIR
Subjt:  -SDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGF-TQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR

Query:  ELVENKIIKLDHI
          V++  +++ H+
Subjt:  ELVENKIIKLDHI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE24.8e-2023.64Show/hide
Query:  YLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSR
        YL   G+    ++ +LF+ +    +I   +YV+DI+  G+   L+ + +D +   F +    +L  FLG++ K+  +G+  SQ +Y  +++ +  +  ++
Subjt:  YLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSR

Query:  HKRTPAVTHVKITKDTEGARADHKLYISIIGS--------------------------------------------------------------------
           TP  T  K+T  +     D   Y  I+GS                                                                    
Subjt:  HKRTPAVTHVKITKDTEGARADHKLYISIIGS--------------------------------------------------------------------

Query:  -SDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGF-TQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR
         +DD  ST+    +LG++ ISW SKKQ  V  S+TEAEY +  +  ++L W+ ++L E G        +YC N+    +  NPV +S+ KHI + +HFIR
Subjt:  -SDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGF-TQDIMTLYCANMSVIDISKNPVQYSQTKHINIRHHFIR

Query:  ELVENKIIKLDHI
          V++  +++ H+
Subjt:  ELVENKIIKLDHI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.8e-1442.42Show/hide
Query:  DDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMT-LYCANMSVIDISKNPVQYSQTKHINIRHHFIRE
        D R+ST+  C FLG +LISW SKKQ  VS S+ EAEY A   A  +++W+     E        T L+C N + I I+ N V + +TKHI    H +RE
Subjt:  DDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMT-LYCANMSVIDISKNPVQYSQTKHINIRHHFIRE

ATMG00810.1 DNA/RNA polymerases superfamily protein2.2e-1227.6Show/hide
Query:  IYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSRHKRTP------------------------
        +YV+DI+  GS   L+   I  +   F M  +G +  FLG+QIK    G+F SQ KYA+ I+   G+   +   TP                        
Subjt:  IYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSRHKRTP------------------------

Query:  -AVTHVKITKDT-------------EGARAD----------------HKLYI--------------SIIGSSDDRKSTSRGCFFLGNNLISWFSKKQNFV
         A+ ++ +T+               E   AD                H LYI                 G +  R+ST+  C FLG N+ISW +K+Q  V
Subjt:  -AVTHVKITKDT-------------EGARAD----------------HKLYI--------------SIIGSSDDRKSTSRGCFFLGNNLISWFSKKQNFV

Query:  SLSTTEAEYIAAGSACTQLIW
        S S+TE EY A      +L W
Subjt:  SLSTTEAEYIAAGSACTQLIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTATTTAAGTTGTAAAGGGTACTCTAGAGGCGAAGCTAACAAAACTCTATTTATTCACAGAACAACTAATCAACTCATAGTTGCTCAAATCTATGTTAATGATAT
CATATTTGGAGGTTCTCCTCAAGATCTTGTTACTAACTTCATAGATATCATGAAACCAGAATTTGAGATGAGCATGGTTGGAGAACTCTCATGTTTTCTGGGGCTTCAAA
TCAAGCAAAAGAGTGAAGGTATATTCACATCACAAGAAAAGTATGCAAAGAATATAATTAAAAAGTTTGGATTAGAACAGTCTCGTCACAAGAGGACTCCAGCTGTGACA
CATGTTAAAATTACTAAAGATACTGAGGGTGCAAGAGCAGATCACAAACTTTACATAAGTATAATCGGTTCTTCTGATGATAGGAAGAGCACCTCTAGAGGTTGTTTCTT
TCTAGGGAACAATCTTATCTCTTGGTTCAGTAAGAAACAAAATTTTGTTTCTTTGTCTACAACTGAAGCTGAATACATAGCAGCAGGGAGTGCTTGTACACAGTTGATCT
GGATGAAGAATATGTTGCATGAGTATGGGTTCACACAAGATATCATGACTTTATATTGTGCTAATATGAGTGTCATTGATATATCAAAAAATCCTGTTCAATATAGTCAA
ACCAAACATATTAATATTAGGCATCATTTTATCCGAGAACTTGTTGAAAATAAAATTATTAAACTTGATCATATTCGTCGAATGTTCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTATTTAAGTTGTAAAGGGTACTCTAGAGGCGAAGCTAACAAAACTCTATTTATTCACAGAACAACTAATCAACTCATAGTTGCTCAAATCTATGTTAATGATAT
CATATTTGGAGGTTCTCCTCAAGATCTTGTTACTAACTTCATAGATATCATGAAACCAGAATTTGAGATGAGCATGGTTGGAGAACTCTCATGTTTTCTGGGGCTTCAAA
TCAAGCAAAAGAGTGAAGGTATATTCACATCACAAGAAAAGTATGCAAAGAATATAATTAAAAAGTTTGGATTAGAACAGTCTCGTCACAAGAGGACTCCAGCTGTGACA
CATGTTAAAATTACTAAAGATACTGAGGGTGCAAGAGCAGATCACAAACTTTACATAAGTATAATCGGTTCTTCTGATGATAGGAAGAGCACCTCTAGAGGTTGTTTCTT
TCTAGGGAACAATCTTATCTCTTGGTTCAGTAAGAAACAAAATTTTGTTTCTTTGTCTACAACTGAAGCTGAATACATAGCAGCAGGGAGTGCTTGTACACAGTTGATCT
GGATGAAGAATATGTTGCATGAGTATGGGTTCACACAAGATATCATGACTTTATATTGTGCTAATATGAGTGTCATTGATATATCAAAAAATCCTGTTCAATATAGTCAA
ACCAAACATATTAATATTAGGCATCATTTTATCCGAGAACTTGTTGAAAATAAAATTATTAAACTTGATCATATTCGTCGAATGTTCAATTAG
Protein sequenceShow/hide protein sequence
MIYLSCKGYSRGEANKTLFIHRTTNQLIVAQIYVNDIIFGGSPQDLVTNFIDIMKPEFEMSMVGELSCFLGLQIKQKSEGIFTSQEKYAKNIIKKFGLEQSRHKRTPAVT
HVKITKDTEGARADHKLYISIIGSSDDRKSTSRGCFFLGNNLISWFSKKQNFVSLSTTEAEYIAAGSACTQLIWMKNMLHEYGFTQDIMTLYCANMSVIDISKNPVQYSQ
TKHINIRHHFIRELVENKIIKLDHIRRMFN