| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0063098.1 pol protein [Cucumis melo var. makuwa] | 1.2e-106 | 94.15 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FRSRYG+YEF+VMSFGLTNA AVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKC+FWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| KAA0063793.1 pol protein [Cucumis melo var. makuwa] | 9.1e-107 | 94.63 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FRSRYG+YEF+VMSFGLTNA AVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKC+FWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| KAA0066101.1 reverse transcriptase [Cucumis melo var. makuwa] | 4.1e-107 | 95.12 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKT+FRSRYG+YEFIVMSFGLTNA AVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKC+FWLKKV+FLGHVVSS+GVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| TYK01306.1 pol protein [Cucumis melo var. makuwa] | 1.2e-106 | 95.12 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKT+FR RYG+YEFIVMSFGLTNA AVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKC+FWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| TYK30208.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.1e-107 | 96.1 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKT+FRSRYG+YEFIVMSFGLTNASAVFMD MNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHL QVLETLRANRLYAKFSKC+FWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7V646 Reverse transcriptase | 5.7e-107 | 94.15 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FRSRYG+YEF+VMSFGLTNA AVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKC+FWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| A0A5A7V6R2 Reverse transcriptase | 4.4e-107 | 94.63 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKT+FRSRYG+YEF+VMSFGLTNA AVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKC+FWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| A0A5A7VK60 Reverse transcriptase | 2.0e-107 | 95.12 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKT+FRSRYG+YEFIVMSFGLTNA AVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKC+FWLKKV+FLGHVVSS+GVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| A0A5D3BSV9 Reverse transcriptase | 5.7e-107 | 95.12 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKT+FR RYG+YEFIVMSFGLTNA AVFMDLMNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHLHQVLETLRAN+LYAKFSKC+FWL+KV+FLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| A0A5D3E340 Ty3-gypsy retrotransposon protein | 2.0e-107 | 96.1 | Show/hide |
Query: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
MRLCIDYRELNKVTVKNRYP PRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKT+FRSRYG+YEFIVMSFGLTNASAVFMD MNRVFKDFLD+FV
Subjt: MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFV
Query: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
IVFIDDILIYSK EAEHEEHL QVLETLRANRLYAKFSKC+FWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Subjt: IVFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSR
Query: IASPL
IASPL
Subjt: IASPL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.3e-44 | 39.71 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
R+ IDYR+LN++TV +R+P+P +D++ +L F+ IDL G+HQ+ + + KT+F +++G+YE++ M FGL NA A F MN + + L+ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
V++DDI+++S EH + L V E L L + KC+F ++ +FLGHV++ +G+ +P KIEA+ +P P+ EI++FLGL GYYR+F+ +F+ I
Subjt: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
Query: ASPL
A P+
Subjt: ASPL
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.0e-44 | 39.22 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
R+ IDYR+LN++T+ +RYP+P +D++ +L F+ IDL G+HQ+ + + I KT+F ++ G+YE++ M FGL NA A F MN + + L+ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
V++DDI+I+S EH + V L L + KC+F K+ +FLGH+V+ +G+ +P K++A+ ++P P+ EIR+FLGL GYYR+F+ +++ I
Subjt: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
Query: ASPL
A P+
Subjt: ASPL
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 1.1e-43 | 43.14 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D KT+F + G YE+ VM FGL NA + F M F+D FV
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
V++DDILI+S+ EH +HL VLE L+ L K KCKF ++ FLG+ + + ++ K A+ ++P P TV + + FLG+ YYRRF+ + S+I
Subjt: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
Query: ASPL
A P+
Subjt: ASPL
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 5.6e-43 | 37.25 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
R+ +D++ LN VT+ + YP+P I+ L A F+ +DL SG+HQ+ +++SDIPKT+F + G YEF+ + FGL NA A+F +++ + ++ +
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
V+IDDI+++S+ H ++L VL +L L K F +V FLG++V+++G+ DP K+ A++ P P++V E++ FLG+ YYR+F++D++++
Subjt: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
Query: ASPL
A PL
Subjt: ASPL
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 1.1e-43 | 43.14 | Show/hide |
Query: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
RLC+DYR LNK T+ + +PLPRID+L ++ A +F+ +DL SGYHQ+ + D KT+F + G YE+ VM FGL NA + F M F+D FV
Subjt: RLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTSFRSRYGNYEFIVMSFGLTNASAVFMDLMNRVFKDFLDTFVI
Query: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
V++DDILI+S+ EH +HL VLE L+ L K KCKF ++ FLG+ + + ++ K A+ ++P P TV + + FLG+ YYRRF+ + S+I
Subjt: VFIDDILIYSKIEAEHEEHLHQVLETLRANRLYAKFSKCKFWLKKVSFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRI
Query: ASPL
A P+
Subjt: ASPL
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