CuGenDBv2

Gene ID	Cmc03g0072061
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr03:18876874..18879136
RNA-Seq Expression	Cmc03g0072061
Synteny	Cmc03g0072061
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035455.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

KAA0050527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

KAA0062270.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T1Y5 Reverse transcriptase

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

A0A5A7U2V7 Reverse transcriptase

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

A0A5A7UNA3 Reverse transcriptase

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

A0A5A7UUL6 Reverse transcriptase

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

A0A5D3BHI1 Reverse transcriptase

0.0e+00

99.86

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
        ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYA

Query:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
        SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG
Subjt:  SRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG

Query:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
        IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM
Subjt:  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAM

Query:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
        HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST
Subjt:  HPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTST

Query:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
        LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS
Subjt:  LDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSS

Query:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
        IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP
Subjt:  IGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGP

Query:  YQITERVGPAAYRLELPIELARIHDVFHI
        YQITERVGPAAYRLELPIELARIHDVFH+
Subjt:  YQITERVGPAAYRLELPIELARIHDVFHI

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

8.0e-108

30.34

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP
        K    +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W  H+ 
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP

Query:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI
        L++ +YNN   S+  M P+E ++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +
Subjt:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI

Query:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI
           +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FH+
Subjt:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI

P0CT35 Transposon Tf2-2 polyprotein

8.0e-108

30.34

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP
        K    +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W  H+ 
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP

Query:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI
        L++ +YNN   S+  M P+E ++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +
Subjt:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI

Query:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI
           +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FH+
Subjt:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI

P0CT36 Transposon Tf2-3 polyprotein

8.0e-108

30.34

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP
        K    +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W  H+ 
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP

Query:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI
        L++ +YNN   S+  M P+E ++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +
Subjt:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI

Query:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI
           +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FH+
Subjt:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI

P0CT37 Transposon Tf2-4 polyprotein

8.0e-108

30.34

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP
        K    +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W  H+ 
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP

Query:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI
        L++ +YNN   S+  M P+E ++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +
Subjt:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI

Query:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI
           +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FH+
Subjt:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI

P0CT41 Transposon Tf2-12 polyprotein

8.0e-108

30.34

Show/hide

Query:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW
        MP+G++ APA F   +N I     +  V+ ++DDIL++S     H +H++ VLQ L+   L    +KCEF   QV F+G+ +S KG +   + ++ V+ W
Subjt:  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNW

Query:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----
        ++P +  E+R FLG   Y R+FI   S+L  PL  L +K+V+++W+    Q+ + +K+ LV+ P+L      K  ++  DAS + +G VL Q  +     
Subjt:  ERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGN-----

Query:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--
         + Y S ++ + + NY   D E+ A++ +LK WRHYL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y PG AN +ADALSR  
Subjt:  VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFG--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR--

Query:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN
             +PK                     + ++S + + Q  +      ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L  
Subjt:  --KSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKN

Query:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT
         I+++ H     +HPG   +   + + + W G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP  SSG++ ++V+VDR +
Subjt:  AILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT

Query:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP
        K    +P   + T +Q AR++  ++++ +G P  I++D D  FTS+ W          +KFS  + PQTDGQ+ERT QT+E +LR        +W  H+ 
Subjt:  KTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLP

Query:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI
        L++ +YNN   S+  M P+E ++   P  +P+      ++     E  Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +
Subjt:  LMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVI

Query:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI
           +  KL+P + GP+ + ++ GP  Y L+LP  +  +    FH+
Subjt:  RFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARI-HDVFHI

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.2e-26

45.16

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Query:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW
        HL +VLQ   + Q YA   KC F   Q+ +LG  H++S +GVS DP K+EA+V W  P + TE+R FLGL GYYRRF++++ ++  PLT L +KN   +W
Subjt:  HLRIVLQTLREKQLYAKFSKCEFWLEQVVFLG--HVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEW

Query:  SDKCEQSFQELKKRLVTAPILALP
        ++    +F+ LK  + T P+LALP
Subjt:  SDKCEQSFQELKKRLVTAPILALP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCATTCGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATCAGTTTGTGATTGTGTTCATTGATGATATATTAGT
TTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATATGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAAC
AAGTAGTATTTTTGGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAATTAGTGCGACAGAAGTACGT
AGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGA
TAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGC
TAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCA
GTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAAAGAGCTAAATCT
GAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTC
CGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTT
CGGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAAC
AGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTA
GCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTA
AGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGA
TGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGATTAAAATGACATCTACGTTAGACCAGCTAGCGAGATTATATGTTGATAAGATTGTGA
GTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACA
TCATTTCATCCCCAAACAGATGGTCAGTCCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCC
ACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGG
GAGAGCGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATCAGAGAAAATCTGAGGAAAGCCCAAGATCGACAGAAAAGTTATGCGGAT
AAGCGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGGAAGAAAAGGTAAGTTAAGTCCTAGATA
TATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATATTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVR
SFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAA
VVLALKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQV
RSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPV
RQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFST
SFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYAD
KRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHI

Cmc03g0072061 (gene) of Melon (Charmono) v1.1 genome