; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0072101 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0072101
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr03:18980810..18981670
RNA-Seq ExpressionCmc03g0072101
SyntenyCmc03g0072101
Gene Ontology termsGO:0006116 - NADH oxidation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005777 - peroxisome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003954 - NADH dehydrogenase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]1.3e-11184Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

KAA0034386.1 Beta-galactosidase [Cucumis melo var. makuwa]1.3e-11184Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

KAA0048203.1 Beta-galactosidase [Cucumis melo var. makuwa]1.3e-11184Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]1.3e-11184Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]1.3e-11184Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

TrEMBL top hitse value%identityAlignment
A0A5A7SM64 Beta-galactosidase6.3e-11284Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

A0A5A7SSP2 Beta-galactosidase6.3e-11283Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y  ++FP  F KLDVSSLSCDVCIR KQH+VSF +Q YKPTQ FTLIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAE+KN  LVEVARSLMLSTSLPSY+WGDAILTAAHLINRM SRIL LQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPLLTR
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL  R
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPLLTR

A0A5A7VLQ7 Beta-galactosidase6.3e-11284Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

A0A5D3BJK7 Beta-galactosidase6.3e-11284Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

A0A5D3C4T4 Beta-galactosidase6.3e-11284Show/hide
Query:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE
        Y   +FP  F K+DVSSLSCDVCIR KQH+VSF +Q YKPTQ F LIHSDVWGPSKVTTSS KRWFV FIDDHTRLTWVYL+ DKSEV SIFQNFYHTI+
Subjt:  YAIFIFPPFF-KLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIE

Query:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC
        TQFH KI ILRSDNGREFQNHNLS+FLASKGIVHQ SCAYT QQNGVAERKN  LVEVARSLMLSTSLPSYLWGDAILTAAHLINRM SRILHLQTPLDC
Subjt:  TQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDC

Query:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL
        LKES  STRL+SEV LRVFGCTA VHNFGPNQTKFTP+AQA CV    PL
Subjt:  LKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPL

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.2e-2936.53Show/hide
Query:  LDVSSLSCDVCIRVKQHQVSFSTQLYKPT---QSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIETQFHIKITI
        L++S   C+ C+  KQ ++ F  QL   T   +   ++HSDV GP    T   K +FVIF+D  T     YL+  KS+V S+FQ+F    E  F++K+  
Subjt:  LDVSSLSCDVCIRVKQHQVSFSTQLYKPT---QSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIETQFHIKITI

Query:  LRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRIL--HLQTPLDCLKESNLS
        L  DNGRE+ ++ +  F   KGI + ++  +T Q NGV+ER    + E AR+++    L    WG+A+LTA +LINR+ SR L    +TP +        
Subjt:  LRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRIL--HLQTPLDCLKESNLS

Query:  TRLISEVTLRVFGCTANVH
         +      LRVFG T  VH
Subjt:  TRLISEVTLRVFGCTANVH

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-3538.14Show/hide
Query:  CDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIETQFHIKITILRSDNGREFQ
        CD C+  KQH+VSF T   +      L++SDV GP ++ +    ++FV FIDD +R  WVY++  K +V  +FQ F+  +E +   K+  LRSDNG E+ 
Subjt:  CDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIETQFHIKITILRSDNGREFQ

Query:  NHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDCLKESNLSTRLISEVTLRVF
        +    ++ +S GI H+ +   T Q NGVAER N  +VE  RS++    LP   WG+A+ TA +LINR  S  L  + P     E   + + +S   L+VF
Subjt:  NHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDCLKESNLSTRLISEVTLRVF

Query:  GCTANVHNFGPNQTK
        GC A  H     +TK
Subjt:  GCTANVHNFGPNQTK

Q12491 Transposon Ty2-B Gag-Pol polyprotein1.5e-1730Show/hide
Query:  DVSSLSCDVCI---RVKQHQVSFSTQLYKPT-QSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVS--SIFQNFYHTIETQFHIKI
        + S+  C  C+     K   V  S   Y+ + + F  +H+D++GP      S   +F+ F D+ TR  WVY + D+ E S  ++F +    I+ QF+ ++
Subjt:  DVSSLSCDVCI---RVKQHQVSFSTQLYKPT-QSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVS--SIFQNFYHTIETQFHIKI

Query:  TILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAI
         +++ D G E+ N  L  F  ++GI    +    S+ +GVAER N  L+   R+L+  + LP++LW  A+
Subjt:  TILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE16.0e-2734.09Show/hide
Query:  YAIFIFPPFFKLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIET
        Y++ +  P  K     LSC  C+  K ++V FS      T+    I+SDVW  S + +    R++VIF+D  TR TW+Y +  KS+V   F  F + +E 
Subjt:  YAIFIFPPFFKLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVIDKSEVSSIFQNFYHTIET

Query:  QFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDCL
        +F  +I    SDNG EF    L ++ +  GI H  S  +T + NG++ERK+  +VE   +L+   S+P   W  A   A +LINR+ + +L L++P   L
Subjt:  QFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMHSRILHLQTPLDCL

Query:  KESNLSTRLISEVTLRVFGC
          ++ +        LRVFGC
Subjt:  KESNLSTRLISEVTLRVFGC

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.4e-2834.6Show/hide
Query:  PTLALQNKIVCCDIFDIYAIFIFPPFFKLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVID
        P+LA+ N ++       +++ +  P  KL    LSC  C   K H+V FS      ++    I+SDVW  S + +    R++VIF+D  TR TW+Y +  
Subjt:  PTLALQNKIVCCDIFDIYAIFIFPPFFKLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTWVYLVID

Query:  KSEVSSIFQNFYHTIETQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLI
        KS+V   F  F   +E +F  +I  L SDNG EF    L D+L+  GI H  S  +T + NG++ERK+  +VE+  +L+   S+P   W  A   A +LI
Subjt:  KSEVSSIFQNFYHTIETQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLI

Query:  NRMHSRILHLQTPLDCLKESNLSTRLISEVTLRVFGC
        NR+ + +L LQ+P        L  +  +   L+VFGC
Subjt:  NRMHSRILHLQTPLDCLKESNLSTRLISEVTLRVFGC

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATACCTTCTGTAGTAGTTTCTCTATGGTTAGTTTACTGTCGTCCTACTTTAGCACTTCAGAACAAGATTGTATGTTGTGACATTTTCGACATATATGCAATATT
TATTTTCCCACCTTTTTTTAAACTTGATGTCTCTTCTCTATCTTGTGATGTGTGTATCAGGGTTAAACAACACCAGGTCTCTTTTTCCACACAACTATATAAACCTACAC
AATCGTTTACCCTCATCCATAGTGACGTTTGGGGTCCTTCCAAGGTCACCACCTCATCGAAAAAGCGATGGTTTGTAATTTTCATCGATGACCATACCCGTCTTACCTGG
GTCTACCTTGTTATAGATAAATCTGAGGTTTCATCCATTTTCCAAAACTTCTATCATACTATTGAAACACAATTCCATATAAAAATTACAATTCTTCGGAGTGATAATGG
TCGGGAATTCCAAAACCATAACCTTAGTGACTTTCTAGCCTCTAAGGGGATTGTTCACCAAATCTCATGTGCCTACACTTCTCAACAAAATGGAGTGGCCGAACGAAAAA
ACTGTCAACTTGTGGAAGTAGCCCGTTCCCTTATGCTTTCCACTTCTCTTCCATCATACTTGTGGGGAGATGCTATTCTTACAGCCGCTCACTTAATCAATAGAATGCAT
TCTCGAATCCTCCACCTTCAGACTCCCTTAGATTGTCTTAAGGAGTCTAACCTCTCTACTCGTCTTATTTCTGAGGTTACTCTTCGTGTGTTTGGGTGTACCGCTAATGT
CCATAATTTTGGCCCTAATCAGACCAAATTTACCCCTCAAGCTCAAGCTTTATGTGTTTGTTGGGTATCCCCTTTACTAACGCGGTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATACCTTCTGTAGTAGTTTCTCTATGGTTAGTTTACTGTCGTCCTACTTTAGCACTTCAGAACAAGATTGTATGTTGTGACATTTTCGACATATATGCAATATT
TATTTTCCCACCTTTTTTTAAACTTGATGTCTCTTCTCTATCTTGTGATGTGTGTATCAGGGTTAAACAACACCAGGTCTCTTTTTCCACACAACTATATAAACCTACAC
AATCGTTTACCCTCATCCATAGTGACGTTTGGGGTCCTTCCAAGGTCACCACCTCATCGAAAAAGCGATGGTTTGTAATTTTCATCGATGACCATACCCGTCTTACCTGG
GTCTACCTTGTTATAGATAAATCTGAGGTTTCATCCATTTTCCAAAACTTCTATCATACTATTGAAACACAATTCCATATAAAAATTACAATTCTTCGGAGTGATAATGG
TCGGGAATTCCAAAACCATAACCTTAGTGACTTTCTAGCCTCTAAGGGGATTGTTCACCAAATCTCATGTGCCTACACTTCTCAACAAAATGGAGTGGCCGAACGAAAAA
ACTGTCAACTTGTGGAAGTAGCCCGTTCCCTTATGCTTTCCACTTCTCTTCCATCATACTTGTGGGGAGATGCTATTCTTACAGCCGCTCACTTAATCAATAGAATGCAT
TCTCGAATCCTCCACCTTCAGACTCCCTTAGATTGTCTTAAGGAGTCTAACCTCTCTACTCGTCTTATTTCTGAGGTTACTCTTCGTGTGTTTGGGTGTACCGCTAATGT
CCATAATTTTGGCCCTAATCAGACCAAATTTACCCCTCAAGCTCAAGCTTTATGTGTTTGTTGGGTATCCCCTTTACTAACGCGGTTATAA
Protein sequenceShow/hide protein sequence
MMIPSVVVSLWLVYCRPTLALQNKIVCCDIFDIYAIFIFPPFFKLDVSSLSCDVCIRVKQHQVSFSTQLYKPTQSFTLIHSDVWGPSKVTTSSKKRWFVIFIDDHTRLTW
VYLVIDKSEVSSIFQNFYHTIETQFHIKITILRSDNGREFQNHNLSDFLASKGIVHQISCAYTSQQNGVAERKNCQLVEVARSLMLSTSLPSYLWGDAILTAAHLINRMH
SRILHLQTPLDCLKESNLSTRLISEVTLRVFGCTANVHNFGPNQTKFTPQAQALCVCWVSPLLTRL