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Cmc03g0072251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0072251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationCMiso1.1chr03:19233810..19234551
RNA-Seq ExpressionCmc03g0072251
SyntenyCmc03g0072251
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035384.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]1.1e-8289.35Show/hide
Query:  MHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMD
        M ASSTVIGNCLI DFRFMSTDRSIPKEIVHKA TNLGVN SYQKAWR KEHMVKILH D VE YALIPRFFDKLVESNP TCTALEMDD+GHFKFCFM 
Subjt:  MHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMD

Query:  FGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRF
        FGASIEGWKYCR IISVD TFLKCKFGGI L ASSQDGNNQIFPLAF IVD ENDASWTWFFEKIRS F
Subjt:  FGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRF

KAA0036500.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]1.1e-8086.98Show/hide
Query:  MHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMD
        M ASSTVI NCLIDDFRFMSTD SIPKEI HK  TNLGVN SYQKAWR KEHMVKILHGDTVE YALI RFFDKLV+SNPGTCTALEMDD+GHFKFCFM 
Subjt:  MHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMD

Query:  FGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRF
        FGASIE WKYC PIIS+D TFLKCKFG I LTASSQDGNNQIFPLAFAIVDSEND SWTWFFEKIR+ F
Subjt:  FGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRF

KAA0037251.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.7e-8189.35Show/hide
Query:  MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNP
        ML+KYTSDHD SLSTAQS  M ASSTVIGNCLIDDFR MSTD SIPKEIVHKACTNLGVN SYQK WRAKEHMVKIL GDTVE YALIPRFF+KLVESNP
Subjt:  MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNP

Query:  GTCTALEMDDNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAI
        GTCTALEMDD+G FKFCFM F ASIEGWKYCRPIISVD TFLKCKFGGI LTASSQDGNNQIFPLAFAI
Subjt:  GTCTALEMDDNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAI

KAA0047748.1 uncharacterized protein E6C27_scaffold1059G00070 [Cucumis melo var. makuwa]1.3e-91100Show/hide
Query:  DDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMDFGASIEGWKYCRP
        DDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMDFGASIEGWKYCRP
Subjt:  DDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMDFGASIEGWKYCRP

Query:  IISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRFQSELI
        IISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRFQSELI
Subjt:  IISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRFQSELI

TYJ95626.1 uncharacterized protein E5676_scaffold104G00450 [Cucumis melo var. makuwa]2.5e-8289.94Show/hide
Query:  MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNP
        MLRKYTS+HD SLSTAQSSHM A+STVIGNCLIDDFRFMS D SIPKEIVHKA TNLGVN SY+KAWRAKEHMVKILHGDTVE YALIPRFFDKLV+SNP
Subjt:  MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNP

Query:  GTCTALEMDDNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAI
         TCTALEMDD+GHFKFCFM FGASIEGWKYCRPIISVD TFLKCKFGGI LTASSQD NNQIFPLAFAI
Subjt:  GTCTALEMDDNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAI

TrEMBL top hitse value%identityAlignment
A0A5A7T6M8 DNA/RNA polymerases superfamily protein2.3e-8189.35Show/hide
Query:  MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNP
        ML+KYTSDHD SLSTAQS  M ASSTVIGNCLIDDFR MSTD SIPKEIVHKACTNLGVN SYQK WRAKEHMVKIL GDTVE YALIPRFF+KLVESNP
Subjt:  MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNP

Query:  GTCTALEMDDNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAI
        GTCTALEMDD+G FKFCFM F ASIEGWKYCRPIISVD TFLKCKFGGI LTASSQDGNNQIFPLAFAI
Subjt:  GTCTALEMDDNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAI

A0A5D3B9S0 Uncharacterized protein1.2e-8289.94Show/hide
Query:  MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNP
        MLRKYTS+HD SLSTAQSSHM A+STVIGNCLIDDFRFMS D SIPKEIVHKA TNLGVN SY+KAWRAKEHMVKILHGDTVE YALIPRFFDKLV+SNP
Subjt:  MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNP

Query:  GTCTALEMDDNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAI
         TCTALEMDD+GHFKFCFM FGASIEGWKYCRPIISVD TFLKCKFGGI LTASSQD NNQIFPLAFAI
Subjt:  GTCTALEMDDNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAI

A0A5D3BMN4 Protein FAR1-RELATED SEQUENCE 45.1e-8186.98Show/hide
Query:  MHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMD
        M ASSTVI NCLIDDFRFMSTD SIPKEI HK  TNLGVN SYQKAWR KEHMVKILHGDTVE YALI RFFDKLV+SNPGTCTALEMDD+GHFKFCFM 
Subjt:  MHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMD

Query:  FGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRF
        FGASIE WKYC PIIS+D TFLKCKFG I LTASSQDGNNQIFPLAFAIVDSEND SWTWFFEKIR+ F
Subjt:  FGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRF

A0A5D3BUA2 MULE domain-containing protein6.4e-92100Show/hide
Query:  DDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMDFGASIEGWKYCRP
        DDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMDFGASIEGWKYCRP
Subjt:  DDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMDFGASIEGWKYCRP

Query:  IISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRFQSELI
        IISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRFQSELI
Subjt:  IISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRFQSELI

A0A5D3BZ76 Protein FAR-RED IMPAIRED RESPONSE 1-like5.4e-8389.35Show/hide
Query:  MHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMD
        M ASSTVIGNCLI DFRFMSTDRSIPKEIVHKA TNLGVN SYQKAWR KEHMVKILH D VE YALIPRFFDKLVESNP TCTALEMDD+GHFKFCFM 
Subjt:  MHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGHFKFCFMD

Query:  FGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRF
        FGASIEGWKYCR IISVD TFLKCKFGGI L ASSQDGNNQIFPLAF IVD ENDASWTWFFEKIRS F
Subjt:  FGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase8.2e-1535.71Show/hide
Query:  AKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGH------FKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQI
        AK   +K   GD  + + LIP+    L  SN G     + D   H      F+  F  F  SI+G+++CRP+I VD   L  K+    + AS+ D  NQ 
Subjt:  AKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDDNGH------FKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQI

Query:  FPLAFAIVDSENDASWTWFFEKIRSR
        FPLAFA+    +  SW WF  +IR +
Subjt:  FPLAFAIVDSENDASWTWFFEKIRSR

AT1G64255.1 MuDR family transposase9.1e-1436Show/hide
Query:  AKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMD--DNGHF-KFC--FMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIF
        AKE  +K + GD  + +   P+    L  SN G     + D   N +F  FC  F  F  SIEG+++CRP+I VD   L C++    + AS  D  N+ F
Subjt:  AKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMD--DNGHF-KFC--FMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIF

Query:  PLAFAIVDSENDASWTWFFEKIRSR
        PLAFA+    +   W WF   IR +
Subjt:  PLAFAIVDSENDASWTWFFEKIRSR

AT1G64260.1 MuDR family transposase1.7e-1533.09Show/hide
Query:  GVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMD-----DNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLT
        G      K    K  ++K + GD  + + ++P+       SN G     + D     D   F+  F  F  SIEG+++CRP+I VD   L  K+    + 
Subjt:  GVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMD-----DNGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLT

Query:  ASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSR
        AS  D  N+ FPLAFA+    +  SW WFF KIR +
Subjt:  ASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTACGAAAATACACTTCTGACCATGATTTTTCATTGAGTACTGCCCAAAGTTCTCACATGCATGCTTCTTCAACAGTAATTGGCAATTGTTTGATAGATGATTTTAG
ATTCATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTTGTACAAACCTTGGAGTTAATACAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACATATGG
TAAAGATATTACACGGTGACACAGTTGAATTGTATGCATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAGGTACATGTACTGCTTTAGAAATGGATGAT
AATGGTCATTTCAAGTTTTGTTTTATGGATTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTGATAGGACATTTTTGAAGTGTAAGTTTGG
TGGCATCCGATTAACAGCTTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGCATCATGGACATGGTTTTTTGAGA
AGATACGAAGTAGATTTCAGAGCGAGCTAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTACGAAAATACACTTCTGACCATGATTTTTCATTGAGTACTGCCCAAAGTTCTCACATGCATGCTTCTTCAACAGTAATTGGCAATTGTTTGATAGATGATTTTAG
ATTCATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTTGTACAAACCTTGGAGTTAATACAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACATATGG
TAAAGATATTACACGGTGACACAGTTGAATTGTATGCATTGATTCCAAGATTCTTTGATAAATTGGTTGAATCTAACCCAGGTACATGTACTGCTTTAGAAATGGATGAT
AATGGTCATTTCAAGTTTTGTTTTATGGATTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTGATAGGACATTTTTGAAGTGTAAGTTTGG
TGGCATCCGATTAACAGCTTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGCATCATGGACATGGTTTTTTGAGA
AGATACGAAGTAGATTTCAGAGCGAGCTAATTTAG
Protein sequenceShow/hide protein sequence
MLRKYTSDHDFSLSTAQSSHMHASSTVIGNCLIDDFRFMSTDRSIPKEIVHKACTNLGVNTSYQKAWRAKEHMVKILHGDTVELYALIPRFFDKLVESNPGTCTALEMDD
NGHFKFCFMDFGASIEGWKYCRPIISVDRTFLKCKFGGIRLTASSQDGNNQIFPLAFAIVDSENDASWTWFFEKIRSRFQSELI