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Cmc03g0072441 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0072441
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionF-box protein At5g67140
Genome locationCMiso1.1chr03:19632414..19635021
RNA-Seq ExpressionCmc03g0072441
SyntenyCmc03g0072441
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK04584.1 F-box protein [Cucumis melo var. makuwa]9.5e-2698.31Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELD+
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
XP_004149695.1 F-box protein At5g67140 [Cucumis sativus]8.8e-2496.61Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRR SLSFAGWKMDDNSTARLIRHAYSL ELDI
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
XP_008456792.1 PREDICTED: F-box protein At5g67140-like isoform X1 [Cucumis melo]9.5e-2698.31Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELD+
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
XP_008456793.1 PREDICTED: F-box protein At5g67140-like isoform X2 [Cucumis melo]9.5e-2698.31Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELD+
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
XP_008457759.1 PREDICTED: F-box protein At5g67140 [Cucumis melo]8.8e-2496.61Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRR SLSFAGWKMDDNSTARLIRHAYSL ELDI
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
TrEMBL top hitse value%identityAlignment
A0A1S3C3N6 F-box protein At5g67140-like isoform X14.6e-2698.31Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELD+
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
A0A1S3C459 F-box protein At5g67140-like isoform X24.6e-2698.31Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELD+
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
A0A1S4E1P2 F-box protein At5g671404.3e-2496.61Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRR SLSFAGWKMDDNSTARLIRHAYSL ELDI
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
A0A5D3BMX7 F-box protein4.3e-2496.61Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRR SLSFAGWKMDDNSTARLIRHAYSL ELDI
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
A0A5D3C007 F-box protein4.6e-2698.31Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELD+
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
SwissProt top hitse value%identityAlignment
Q9FH99 F-box protein At5g671402.1e-1562.71Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        + TSFT LAQA GVC+KW++ V  S+ RR +LSFAGWKMDD+ST+RL+  A++L ELDI
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
Arabidopsis top hitse value%identityAlignment
AT5G67140.1 F-box/RNI-like superfamily protein1.5e-1662.71Show/hide
Query:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI
        + TSFT LAQA GVC+KW++ V  S+ RR +LSFAGWKMDD+ST+RL+  A++L ELDI
Subjt:  MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCTCCTTCACCGATTTGGCTCAGGCATGTGGTGTATGTAGAAAATGGAAGGAAGGAGTTAAATTGTCTCTCGGTAGAAGGAATAGTTTGAGCTTTGCTGGTTG
GAAGATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTTGGGAGCTCGACATATTTTCTGGTGAATTGCGTCTCAGTAATTGTTTGGACACACTTG
GTGGCAGTGGTAATAGACGCCATGCTTGCGGAATTTGA
mRNA sequenceShow/hide mRNA sequence
GCTTTCTAGTGAAGTTGCATCCATCCGTCTCCTAAAATGTTTTTTCACGGTAAGTAACTTAAAATGGGAGATTGAATGGGTATCTACGAAACCTTTGTACTATGTATTTA
CTATTTATGTTGCTGAAGAGGCGTGGTGGAGAGTTTGAGAATGTAGTGATTGGTGCTGTGATGCAGAGGTTGGACTATGGGTTGTTCTACTGGCTCATATTTTTGCTATG
ATCACCTCCTTCACCGATTTGGCTCAGGCATGTGGTGTATGTAGAAAATGGAAGGAAGGAGTTAAATTGTCTCTCGGTAGAAGGAATAGTTTGAGCTTTGCTGGTTGGAA
GATGGATGATAACTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTTGGGAGCTCGACATATTTTCTGGTGAATTGCGTCTCAGTAATTGTTTGGACACACTTGGTG
GCAGTGGTAATAGACGCCATGCTTGCGGAATTTGAATTTGAAACACGACGAGCTTCGCAGTGGCCTTCATTCTTCTAACATGTTGGTTATATATGGTGGACTTGTGGTTG
CAAGTGGAGGAGAAGAATTCACAATCTGGCTACTTTTTGGATTTGTGGTCAATACATCTAATGTTATCATCTTGGAAGATTTCGAGGAGTTGATGATAACACTCGTGAGA
CTTTGAGTTTGGAGTTAATTAAGAGTGTGGGGCTTGGAGGAGGGTAATGTCTTTGTTTCTTATTATTATATATACTTTGTGTTTTATGATTAAGAATGATGATCATAACT
TTTTTGTAATATGAATAAGAACGATGTTCCTAAGTTGTAAGTATGTAATGACCAACTATATGTATATTCAAGGATATATATGCAATTTATTAGTTCTTTGATTGA
Protein sequenceShow/hide protein sequence
MITSFTDLAQACGVCRKWKEGVKLSLGRRNSLSFAGWKMDDNSTARLIRHAYSLWELDIFSGELRLSNCLDTLGGSGNRRHACGI