; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0072501 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0072501
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr03:19731361..19732422
RNA-Seq ExpressionCmc03g0072501
SyntenyCmc03g0072501
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041132.1 hypothetical protein E6C27_scaffold128G00450 [Cucumis melo var. makuwa]3.6e-17286Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        E S SLLAQFQVRSSLV EIV RQ EDSNLQK   K+K+G E EFELRTDGAIVKQ  LCV NISELK AILEEAH+SAYAMHPGSTKMYRTLKKTYWWS
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        GMK+EIVEYVDRCLICQQ+KPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTS G+DGIWVIVDRLTKT +FIPIK TS LDQLA+LYVDKIVSQ+GV
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV
        PVSIVSDRDPRFTSKFWPS+QKA GT LKFS +FHPQTDGQSERTIQTLEDML+ACVLQ KG+WDTHL LMEFAYNN+YQSSI MAP+EALYGRPC+T V
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV

Query:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF
        C+NEVGERKLVGPELVQ+T++NIKLIRENL+ AQDRQKSY DKRRR+LEF
Subjt:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF

KAA0050493.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-17185.43Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        E S SLLAQFQVRSSLV EIV RQ EDSNLQK   K+K+G E EFELRTDGAIVKQ  LCV NISELK AILEEAH+SAYAMHPGSTKMYRTLKKTYWWS
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        GMK+EI EYVDRCLICQQ+KPVRQRPGG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGIWVIVDRLTKT +FIPIK TS LDQLA+LYVDKIVSQ+GV
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV
        PVSIVSDRDPRFTSKFWPS+QKA GT LKFS +FHPQTDGQSERTIQTLEDML+ACVLQ KG+WDTHL LMEFAYNN+YQSSI MAP+EALYGRPC+T V
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV

Query:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF
        C+NEVGERKLVGPELVQ+T++NIKLIRENL+ AQDRQKSY DKRRR+LEF
Subjt:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.8e-18099.37Show/hide
Query:  MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY
        M AESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY
Subjt:  MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY

Query:  WWSGMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ
        WWSGMKREIVEYVDRCLICQQIKPVRQR GGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ
Subjt:  WWSGMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK
        HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK

Query:  TTVCYNEVGERKLVGPE
        TTVCYNEVGERKLVGPE
Subjt:  TTVCYNEVGERKLVGPE

KAA0053246.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-17185.43Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        E S SLLAQFQVRSSLV EIV RQ EDSNLQK   K+K+G E EFELRTDGAIVKQ  LCV NISELK AILEEAH+SAYAMHPGSTKMYRTLKKTYWWS
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        GMK+EI EYVDRCLICQQ+KPVRQRPGG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGIWVIVDRLTKT +FIPIK TS LDQLA+LYVDKIVSQ+GV
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV
        PVSIVSDRDPRFTSKFWPS+QKA GT LKFS +FHPQTDGQSERTIQTLEDML+ACVLQ KG+WDTHL LMEFAYNN+YQSSI MAP+EALYGRPC+T V
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV

Query:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF
        C+NEVGERKLVGPELVQ+T++NIKLIRENL+ AQDRQKSY DKRRR+LEF
Subjt:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF

TYK11723.1 reverse transcriptase [Cucumis melo var. makuwa]4.2e-17688.39Show/hide
Query:  MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY
        M AESS SLLAQFQVRSSLVAE VGRQ EDSNLQKMLAKAKQGPEAEFELRT+ AIVKQ  LCV NIS+LKGAILEE HN AYAMHPGSTKMYRTLK TY
Subjt:  MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY

Query:  WWSGMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ
        WW GMKREI EYVDRCLICQQ+K VRQ PGGLLNPLP+PEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKT +FIPIK TS LDQLAKLYVD+IVSQ
Subjt:  WWSGMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK
        +GVPVSIVSDRDPRFTSKF  SVQKA GTKLKFS  FHPQTDGQ ERTIQTLEDML+ACVLQF GNWDTHLSLMEFAYNNSYQS+I MAPFEALYG+PC+
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK

Query:  TTVCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF
        T VC+NEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSY DKR+RDLEF
Subjt:  TTVCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF

TrEMBL top hitse value%identityAlignment
A0A5A7TCD9 Reverse transcriptase1.8e-17286Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        E S SLLAQFQVRSSLV EIV RQ EDSNLQK   K+K+G E EFELRTDGAIVKQ  LCV NISELK AILEEAH+SAYAMHPGSTKMYRTLKKTYWWS
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        GMK+EIVEYVDRCLICQQ+KPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTS G+DGIWVIVDRLTKT +FIPIK TS LDQLA+LYVDKIVSQ+GV
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV
        PVSIVSDRDPRFTSKFWPS+QKA GT LKFS +FHPQTDGQSERTIQTLEDML+ACVLQ KG+WDTHL LMEFAYNN+YQSSI MAP+EALYGRPC+T V
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV

Query:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF
        C+NEVGERKLVGPELVQ+T++NIKLIRENL+ AQDRQKSY DKRRR+LEF
Subjt:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF

A0A5A7U2V7 Reverse transcriptase5.1e-17285.43Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        E S SLLAQFQVRSSLV EIV RQ EDSNLQK   K+K+G E EFELRTDGAIVKQ  LCV NISELK AILEEAH+SAYAMHPGSTKMYRTLKKTYWWS
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        GMK+EI EYVDRCLICQQ+KPVRQRPGG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGIWVIVDRLTKT +FIPIK TS LDQLA+LYVDKIVSQ+GV
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV
        PVSIVSDRDPRFTSKFWPS+QKA GT LKFS +FHPQTDGQSERTIQTLEDML+ACVLQ KG+WDTHL LMEFAYNN+YQSSI MAP+EALYGRPC+T V
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV

Query:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF
        C+NEVGERKLVGPELVQ+T++NIKLIRENL+ AQDRQKSY DKRRR+LEF
Subjt:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF

A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.3e-18099.37Show/hide
Query:  MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY
        M AESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY
Subjt:  MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY

Query:  WWSGMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ
        WWSGMKREIVEYVDRCLICQQIKPVRQR GGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ
Subjt:  WWSGMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK
        HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK

Query:  TTVCYNEVGERKLVGPE
        TTVCYNEVGERKLVGPE
Subjt:  TTVCYNEVGERKLVGPE

A0A5D3BS67 Reverse transcriptase5.1e-17285.43Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        E S SLLAQFQVRSSLV EIV RQ EDSNLQK   K+K+G E EFELRTDGAIVKQ  LCV NISELK AILEEAH+SAYAMHPGSTKMYRTLKKTYWWS
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        GMK+EI EYVDRCLICQQ+KPVRQRPGG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGIWVIVDRLTKT +FIPIK TS LDQLA+LYVDKIVSQ+GV
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV
        PVSIVSDRDPRFTSKFWPS+QKA GT LKFS +FHPQTDGQSERTIQTLEDML+ACVLQ KG+WDTHL LMEFAYNN+YQSSI MAP+EALYGRPC+T V
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTV

Query:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF
        C+NEVGERKLVGPELVQ+T++NIKLIRENL+ AQDRQKSY DKRRR+LEF
Subjt:  CYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF

A0A5D3CIH8 Reverse transcriptase2.0e-17688.39Show/hide
Query:  MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY
        M AESS SLLAQFQVRSSLVAE VGRQ EDSNLQKMLAKAKQGPEAEFELRT+ AIVKQ  LCV NIS+LKGAILEE HN AYAMHPGSTKMYRTLK TY
Subjt:  MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTY

Query:  WWSGMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ
        WW GMKREI EYVDRCLICQQ+K VRQ PGGLLNPLP+PEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKT +FIPIK TS LDQLAKLYVD+IVSQ
Subjt:  WWSGMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQ

Query:  HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK
        +GVPVSIVSDRDPRFTSKF  SVQKA GTKLKFS  FHPQTDGQ ERTIQTLEDML+ACVLQF GNWDTHLSLMEFAYNNSYQS+I MAPFEALYG+PC+
Subjt:  HGVPVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCK

Query:  TTVCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF
        T VC+NEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSY DKR+RDLEF
Subjt:  TTVCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.3e-4428Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  ++ + + N ++L   I+++ H     +HPG   +   + + + W 
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   +   +Q A+++  ++++  G 
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT
        P  I++D D  FTS+ W          +KFS+ + PQTDGQ+ERT QT+E +L+         W  H+SL++ +YNN+  S+  M PFE ++   P  + 
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT

Query:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE
        +      ++     E  Q T    + ++E+L     + K Y D + +++E
Subjt:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE

P0CT35 Transposon Tf2-2 polyprotein1.3e-4428Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  ++ + + N ++L   I+++ H     +HPG   +   + + + W 
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   +   +Q A+++  ++++  G 
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT
        P  I++D D  FTS+ W          +KFS+ + PQTDGQ+ERT QT+E +L+         W  H+SL++ +YNN+  S+  M PFE ++   P  + 
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT

Query:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE
        +      ++     E  Q T    + ++E+L     + K Y D + +++E
Subjt:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE

P0CT36 Transposon Tf2-3 polyprotein1.3e-4428Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  ++ + + N ++L   I+++ H     +HPG   +   + + + W 
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   +   +Q A+++  ++++  G 
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT
        P  I++D D  FTS+ W          +KFS+ + PQTDGQ+ERT QT+E +L+         W  H+SL++ +YNN+  S+  M PFE ++   P  + 
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT

Query:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE
        +      ++     E  Q T    + ++E+L     + K Y D + +++E
Subjt:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE

P0CT41 Transposon Tf2-12 polyprotein1.3e-4428Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  ++ + + N ++L   I+++ H     +HPG   +   + + + W 
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   +   +Q A+++  ++++  G 
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT
        P  I++D D  FTS+ W          +KFS+ + PQTDGQ+ERT QT+E +L+         W  H+SL++ +YNN+  S+  M PFE ++   P  + 
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT

Query:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE
        +      ++     E  Q T    + ++E+L     + K Y D + +++E
Subjt:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE

Q9UR07 Transposon Tf2-11 polyprotein1.3e-4428Show/hide
Query:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS
        ++S + + Q  +      ++V     D+ L  +L    +  E   +L+    I  ++ + + N ++L   I+++ H     +HPG   +   + + + W 
Subjt:  ESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWS

Query:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV
        G++++I EYV  C  CQ  K    +P G L P+P  E  WE ++MDF+  LP +S GY+ ++V+VDR +K A  +P   +   +Q A+++  ++++  G 
Subjt:  GMKREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGV

Query:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT
        P  I++D D  FTS+ W          +KFS+ + PQTDGQ+ERT QT+E +L+         W  H+SL++ +YNN+  S+  M PFE ++   P  + 
Subjt:  PVSIVSDRDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYG-RPCKTT

Query:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE
        +      ++     E  Q T    + ++E+L     + K Y D + +++E
Subjt:  VCYNEVGERKLVGPELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLE

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCAGAAAGCTCAGAGAGTCTTTTAGCTCAATTTCAAGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAGAAG
ATGCTTGCAAAGGCCAAGCAAGGCCCAGAGGCAGAATTTGAGTTGAGAACGGACGGTGCCATAGTTAAGCAAGAAGTACTATGTGTTTCGAATATTAGTGAGCTT
AAGGGTGCTATACTAGAAGAAGCTCACAATTCAGCATATGCTATGCATCCAGGAAGCACCAAGATGTATAGAACTCTGAAGAAGACTTATTGGTGGTCTGGTATG
AAGCGAGAGATAGTTGAATATGTCGATAGATGTTTGATCTGTCAACAGATTAAACCAGTGAGGCAGAGGCCGGGAGGACTCCTTAATCCCCTGCCAGTGCCAGAG
TGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAGCG
CAGTTTATACCGATTAAAGCGACGTCTATACTAGATCAGCTAGCTAAGTTATACGTCGACAAGATTGTAAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGAT
AGGGACCCGAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAAAAAGCAACGGGAACAAAGTTGAAGTTCAGTATCGCGTTCCATCCCCAGACAGATGGTCAGTCA
GAGAGGACCATCCAGACCTTAGAAGACATGTTGAAAGCATGTGTCCTTCAGTTTAAGGGAAATTGGGATACCCACTTATCACTTATGGAGTTCGCTTATAATAAC
AGCTACCAGTCTAGTATTGACATGGCACCATTTGAGGCTTTGTATGGGAGACCATGCAAGACTACTGTGTGCTACAACGAAGTGGGAGAACGAAAGCTAGTTGGT
CCTGAGTTAGTACAAGTTACGTCAGACAATATTAAGCTGATTAGGGAAAATCTGAAAATAGCTCAGGATCGACAGAAGAGCTATACAGATAAGCGACGAAGAGAC
TTAGAGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGCAGAAAGCTCAGAGAGTCTTTTAGCTCAATTTCAAGTTAGGTCTTCCTTAGTAGCAGAGATTGTAGGAAGACAGCCAGAGGATAGTAATTTGCAGAAG
ATGCTTGCAAAGGCCAAGCAAGGCCCAGAGGCAGAATTTGAGTTGAGAACGGACGGTGCCATAGTTAAGCAAGAAGTACTATGTGTTTCGAATATTAGTGAGCTT
AAGGGTGCTATACTAGAAGAAGCTCACAATTCAGCATATGCTATGCATCCAGGAAGCACCAAGATGTATAGAACTCTGAAGAAGACTTATTGGTGGTCTGGTATG
AAGCGAGAGATAGTTGAATATGTCGATAGATGTTTGATCTGTCAACAGATTAAACCAGTGAGGCAGAGGCCGGGAGGACTCCTTAATCCCCTGCCAGTGCCAGAG
TGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATGGGTAATAGTAGATAGACTCACCAAGACAGCG
CAGTTTATACCGATTAAAGCGACGTCTATACTAGATCAGCTAGCTAAGTTATACGTCGACAAGATTGTAAGTCAACATGGAGTGCCAGTGTCCATAGTTTCAGAT
AGGGACCCGAGGTTTACTTCTAAGTTTTGGCCTAGTGTGCAAAAAGCAACGGGAACAAAGTTGAAGTTCAGTATCGCGTTCCATCCCCAGACAGATGGTCAGTCA
GAGAGGACCATCCAGACCTTAGAAGACATGTTGAAAGCATGTGTCCTTCAGTTTAAGGGAAATTGGGATACCCACTTATCACTTATGGAGTTCGCTTATAATAAC
AGCTACCAGTCTAGTATTGACATGGCACCATTTGAGGCTTTGTATGGGAGACCATGCAAGACTACTGTGTGCTACAACGAAGTGGGAGAACGAAAGCTAGTTGGT
CCTGAGTTAGTACAAGTTACGTCAGACAATATTAAGCTGATTAGGGAAAATCTGAAAATAGCTCAGGATCGACAGAAGAGCTATACAGATAAGCGACGAAGAGAC
TTAGAGTTCTAG
Protein sequenceShow/hide protein sequence
MIAESSESLLAQFQVRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEAEFELRTDGAIVKQEVLCVSNISELKGAILEEAHNSAYAMHPGSTKMYRTLKKTYWWSGM
KREIVEYVDRCLICQQIKPVRQRPGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGIWVIVDRLTKTAQFIPIKATSILDQLAKLYVDKIVSQHGVPVSIVSD
RDPRFTSKFWPSVQKATGTKLKFSIAFHPQTDGQSERTIQTLEDMLKACVLQFKGNWDTHLSLMEFAYNNSYQSSIDMAPFEALYGRPCKTTVCYNEVGERKLVG
PELVQVTSDNIKLIRENLKIAQDRQKSYTDKRRRDLEF