; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0072521 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0072521
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationCMiso1.1chr03:19769771..19770286
RNA-Seq ExpressionCmc03g0072521
SyntenyCmc03g0072521
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0009228 - thiamine biosynthetic process (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0046540 - U4/U6 x U5 tri-snRNP complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008972 - phosphomethylpyrimidine kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025368.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.4e-8191.23Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        MVQNCI LN GSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKN FGPEV ESMGN+VEQ CR LFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+TTPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

KAA0038019.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.4e-8191.81Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        +VQNCI LNAGSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLK  FGPEVAESMGN+VEQ CRRLFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+TTPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

TYK03730.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.3e-8292.4Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        +VQNCI LNAGSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKN FGPEVAESMGN+VEQ CRRLFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+TTPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

TYK16593.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]1.3e-8292.4Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        +VQNCI LNAGSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKN FGPEVAESMGN+VEQ CRRLFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+TTPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

TYK28895.1 putative transposase [Cucumis melo var. makuwa]6.4e-8291.81Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        +VQNCI LNAGSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKN FGPEVAESMGN+VEQ CRRLFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+ TPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

TrEMBL top hitse value%identityAlignment
A0A5A7SGU9 Zinc finger BED domain-containing protein RICESLEEPER 2-like6.9e-8291.23Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        MVQNCI LN GSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKN FGPEV ESMGN+VEQ CR LFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+TTPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

A0A5D3BX83 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.3e-8392.4Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        +VQNCI LNAGSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKN FGPEVAESMGN+VEQ CRRLFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+TTPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.9e-8291.81Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        +VQNCI LNAGSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLK  FGPEVAESMGN+VEQ CRRLFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+TTPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like6.3e-8392.4Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        +VQNCI LNAGSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKN FGPEVAESMGN+VEQ CRRLFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+TTPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

A0A5D3DZY7 Putative transposase3.1e-8291.81Show/hide
Query:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS
        +VQNCI LNAGSAN LLVGMANNMK KFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKN FGPEVAESMGN+VEQ CRRLFHEYSTTRSGSRQGCS
Subjt:  MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
        S STTSTQTVS LDANIDFDSNENVGEDFVYDTIV+EFE D+ TPFEQGSSEIDIYLLEANVRTEGDFD+L
Subjt:  SISTTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 14.6e-0627.5Show/hide
Query:  GSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEY----------STTRSGSRQGCS
        G  + +   +A +M  +F+KYW   +  NL+L +A+V+DPR K++ V F    ++G E A+ +  +V+     L++EY             + G     +
Subjt:  GSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEY----------STTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFD
        S ++T     S+ D  +DFD
Subjt:  SISTTSTQTVSSLDANIDFD

Q0JMB2 Zinc finger BED domain-containing protein RICESLEEPER 41.5e-0424.12Show/hide
Query:  GMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYST-----------TRSGSRQGCSSI-----
        G+   +  KF+KYW   +  N++L +A+ +DPR K++ V F    ++GP  A     +V+     L+ EY+                   G   I     
Subjt:  GMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYST-----------TRSGSRQGCSSI-----

Query:  -STTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
         +T S  T ++    +DFD                 +  + TT  +    E+++YL EA  +   DFD+L
Subjt:  -STTSTQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 21.1e-0426.67Show/hide
Query:  GSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEY----------STTRSGSRQGCS
        G  + +   +A +M  +F+KYW   +  NL+L +A+V+DPR K++ V F    ++G E A+ +  +V+     L+ EY             +       +
Subjt:  GSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEY----------STTRSGSRQGCS

Query:  SISTTSTQTVSSLDANIDFD
        S + T     S+ D  +DFD
Subjt:  SISTTSTQTVSSLDANIDFD

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 31.5e-0427.81Show/hide
Query:  ANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCSSISTTSTQTVSSLDANIDFD
        A  M  +F+KYW   +  NL+L +A+V+DPR K++ V F    +   E A+ +  +V+     L+ EY+T    +R        ++  T  + D  +DFD
Subjt:  ANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCSSISTTSTQTVSSLDANIDFD

Query:  SNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML
                 +Y + +      AT+  +   SE++ YL EA +    DF++L
Subjt:  SNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER5.1e-0529.57Show/hide
Query:  LVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEY--------STTRSGSRQGCSS-----IS
        + G+A  M+ K +KYW      +L+L +A+V+DPR K++ V F    +FG +  +++   V+     LF EY        +T+  G   G S      + 
Subjt:  LVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEY--------STTRSGSRQGCSS-----IS

Query:  TTSTQTVSSLDANID
        TT     S LD  +D
Subjt:  TTSTQTVSSLDANID

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain3.6e-0629.57Show/hide
Query:  LVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEY--------STTRSGSRQGCSS-----IS
        + G+A  M+ K +KYW      +L+L +A+V+DPR K++ V F    +FG +  +++   V+     LF EY        +T+  G   G S      + 
Subjt:  LVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEY--------STTRSGSRQGCSS-----IS

Query:  TTSTQTVSSLDANID
        TT     S LD  +D
Subjt:  TTSTQTVSSLDANID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGAATTGTATATGTTTGAATGCGGGTAGTGCAAATACATTGTTAGTTGGAATGGCTAATAACATGAAGACAAAATTTGAGAAATATTGGGGAAACAAT
GAAAAGAATAATTTGTTGTTGTATGTTGCTATTGTGTTGGATCCTCGAAAGAAATTAAGATTTGTATCTTTTTGTTTGAAAAATGTTTTTGGTCCCGAGGTTGCT
GAATCCATGGGAAATATAGTGGAACAATATTGTAGACGTCTCTTTCATGAGTATAGTACTACTCGAAGTGGGAGTAGACAAGGATGTAGTAGTATTAGTACAACT
AGTACACAAACTGTTTCAAGCTTGGATGCTAATATTGATTTTGATTCAAATGAAAATGTGGGTGAAGATTTTGTCTACGACACGATTGTTAAGGAATTTGAAGGT
GATGCTACTACACCTTTCGAGCAGGGGTCATCGGAGATTGATATCTATTTGTTGGAAGCCAATGTTAGGACCGAAGGTGATTTTGACATGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAGAATTGTATATGTTTGAATGCGGGTAGTGCAAATACATTGTTAGTTGGAATGGCTAATAACATGAAGACAAAATTTGAGAAATATTGGGGAAACAAT
GAAAAGAATAATTTGTTGTTGTATGTTGCTATTGTGTTGGATCCTCGAAAGAAATTAAGATTTGTATCTTTTTGTTTGAAAAATGTTTTTGGTCCCGAGGTTGCT
GAATCCATGGGAAATATAGTGGAACAATATTGTAGACGTCTCTTTCATGAGTATAGTACTACTCGAAGTGGGAGTAGACAAGGATGTAGTAGTATTAGTACAACT
AGTACACAAACTGTTTCAAGCTTGGATGCTAATATTGATTTTGATTCAAATGAAAATGTGGGTGAAGATTTTGTCTACGACACGATTGTTAAGGAATTTGAAGGT
GATGCTACTACACCTTTCGAGCAGGGGTCATCGGAGATTGATATCTATTTGTTGGAAGCCAATGTTAGGACCGAAGGTGATTTTGACATGCTATAG
Protein sequenceShow/hide protein sequence
MVQNCICLNAGSANTLLVGMANNMKTKFEKYWGNNEKNNLLLYVAIVLDPRKKLRFVSFCLKNVFGPEVAESMGNIVEQYCRRLFHEYSTTRSGSRQGCSSISTT
STQTVSSLDANIDFDSNENVGEDFVYDTIVKEFEGDATTPFEQGSSEIDIYLLEANVRTEGDFDML