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Cmc03g0072741 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0072741
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionZinc finger MYM-type protein
Genome locationCMiso1.1chr03:20108047..20108316
RNA-Seq ExpressionCmc03g0072741
SyntenyCmc03g0072741
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0008381 - mechanosensitive ion channel activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066112.1 Dimer_Tnp_hAT domain-containing protein [Cucumis melo var. makuwa]1.1e-2981.82Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        MVV   DKVY LVYQLLTLALILPVAT T+ER FSAMN+VKTRLRNR+ DQWMNDCLI YIEKDLLDKLDNKLIMD+FQ M+ R+GQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

XP_008245511.1 PREDICTED: zinc finger MYM-type protein 1-like [Prunus mume]3.8e-2569.32Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        MV    D++YPLVY LLTLALILPVATA+VER+FSAMNIVK RLRNRM D WMNDCL+ YIEKD+ + +D++++M +FQNM+ RRGQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

XP_008449194.1 PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo]5.2e-2773.86Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        MV+   DKVYPLVY+LLTLALILPV TATV+RIFSAM+I+KT+ R RMKDQWMNDCL+ YIE+DL DK+DN+ IM +FQNM+ RRGQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

XP_021829887.1 uncharacterized protein LOC110770113 [Prunus avium]7.6e-2670.45Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        MV  N DK+YPLVY LLTLALILPVATA+VER+FSAMNIVK RLRNR+ D WMNDCL+ YIEKD+ + +D++++M +FQNM+ RRGQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

XP_028062659.1 zinc finger MYM-type protein 1-like [Camellia sinensis]2.4e-2470.45Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        M+    DKVYPLVY LLTLALILPVAT TVER+FSAMNIVK RLRNR+ D+WMND LI YIE+D+ D +DN  IM++FQ M+ RRGQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

TrEMBL top hitse value%identityAlignment
A0A1S3BM43 uncharacterized protein LOC1034911452.5e-2773.86Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        MV+   DKVYPLVY+LLTLALILPV TATV+RIFSAM+I+KT+ R RMKDQWMNDCL+ YIE+DL DK+DN+ IM +FQNM+ RRGQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

A0A5A7VCQ2 Dimer_Tnp_hAT domain-containing protein5.5e-3081.82Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        MVV   DKVY LVYQLLTLALILPVAT T+ER FSAMN+VKTRLRNR+ DQWMNDCLI YIEKDLLDKLDNKLIMD+FQ M+ R+GQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

A0A5D3BDJ0 Dimer_Tnp_hAT domain-containing protein1.5e-2485.53Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMD
        MVV   DKV PLVY+LLTLALIL VATATVER FSAMNIVKT+L NRM DQWMNDCLI YIEKDLLDKLDNKLIMD
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMD

A0A6P5TKH2 zinc finger MYM-type protein 1-like1.5e-2469.32Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        MV  N DK+YPLVY LLTLALIL VATA+VER+FSAMNIVK RLRNRM D WMND L+ YIEKD+ + +D++++M +FQNM+ RRGQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

A0A6P5TRY7 uncharacterized protein LOC1107701133.7e-2670.45Show/hide
Query:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        MV  N DK+YPLVY LLTLALILPVATA+VER+FSAMNIVK RLRNR+ D WMNDCL+ YIEKD+ + +D++++M +FQNM+ RRGQL
Subjt:  MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19260.1 TTF-type zinc finger protein with HAT dimerisation domain4.7e-1856.96Show/hide
Query:  YPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        +PLVY+LL ++LILPVATATVER FSAMN VKT LRNR+ D +++DCL+ +IEK  L+ + N+ ++ +FQ+M  RR  L
Subjt:  YPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

AT2G06541.1 TTF-type zinc finger protein with HAT dimerisation domain4.2e-1450.67Show/hide
Query:  YPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIR
        +P VY+LL + L LP+ATATVER FSA  +VKT LRNR+ DQ++ND ++  ++++L D + NK+++ +FQ+ME R
Subjt:  YPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIR

AT2G06541.2 TTF-type zinc finger protein with HAT dimerisation domain4.2e-1450.67Show/hide
Query:  YPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIR
        +P VY+LL + L LP+ATATVER FSA  +VKT LRNR+ DQ++ND ++  ++++L D + NK+++ +FQ+ME R
Subjt:  YPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIR

AT3G29765.1 General transcription factor 2-related zinc finger protein1.8e-1756.96Show/hide
Query:  YPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL
        +PLVY+LL L+LILPVATATV R FSAMN VKT LRNR  D +++DCL+ +IEK +L+ + N+ ++ +FQ+M  RR  L
Subjt:  YPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQL

AT3G30235.1 General transcription factor 2-related zinc finger protein1.0e-0466.67Show/hide
Query:  LVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKD
        ++ +LL L LIL VATATVER FSAM IVKT  RNR+ D
Subjt:  LVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGTTATGAACGGAGATAAGGTCTACCCATTAGTTTATCAGTTGCTCACATTAGCGTTGATTTTACCAGTTGCAACAGCTACTGTAGAGAGAATATTTTCT
GCTATGAATATTGTGAAGACTCGACTGCGCAATCGAATGAAAGATCAATGGATGAATGATTGTCTTATAACTTATATTGAGAAAGATTTATTGGATAAGTTAGAT
AATAAACTTATCATGGATCAATTTCAAAACATGGAAATTCGTAGAGGACAATTAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGTTATGAACGGAGATAAGGTCTACCCATTAGTTTATCAGTTGCTCACATTAGCGTTGATTTTACCAGTTGCAACAGCTACTGTAGAGAGAATATTTTCT
GCTATGAATATTGTGAAGACTCGACTGCGCAATCGAATGAAAGATCAATGGATGAATGATTGTCTTATAACTTATATTGAGAAAGATTTATTGGATAAGTTAGAT
AATAAACTTATCATGGATCAATTTCAAAACATGGAAATTCGTAGAGGACAATTAAATTAA
Protein sequenceShow/hide protein sequence
MVVMNGDKVYPLVYQLLTLALILPVATATVERIFSAMNIVKTRLRNRMKDQWMNDCLITYIEKDLLDKLDNKLIMDQFQNMEIRRGQLN