| GenBank top hits | e value | %identity | Alignment |
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| KAA0036643.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.3e-75 | 87.35 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD P IVSE PVSE VDT NL CELE RRSKRQRTEKSFGPDFLSTFIVE RDEIDCNFTNL+LI+ED KTYQEALN V S MWKEAIKSELDSL M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIR
NHTW+LVDLPMGNKPIRCKWIFKRKTKPNG IERYK RLVVVGYTQKQG+DYFDTYSPVTKITTIR
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIR
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| KAA0038001.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-75 | 89.94 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD EN SIVSET VSE V+TSNLRCELELRRSKRQRTEKSF PDFLSTFIVE RDEID NFTNLYLIDEDPKTYQE LN V SMWKEAIKSELDSL+M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPV
NHTWDLVDLPMGNKPIRC+WIFKRKTKPNGS+ERYK RLVVVGYTQKQGIDYFDTYSPV
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPV
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| KAA0042080.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 5.4e-82 | 92.86 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD ENPSIVSE PVSETVDTSNLRCELELRRSKRQRTEKSFG DFLSTFIVE RDEID NFTNLYLIDEDPKTYQEALN V SMWKEAI SELDSL+M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRAL
NHTWDLVDLPM NKPIRCKWIFKRKTKPNGSIERYK RLVVVGYTQKQGIDYFDTYSPVTKITTIRAL
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRAL
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| TYJ97996.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 7.8e-73 | 95.17 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD ENPSIVSETPVSETV+TSNLRCELEL RSKRQRTEKSFGPDFLSTFIVE RDEIDCNFTNLYLIDEDPKTYQEALN V SSMWKEAIKSELDSL+M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYT
NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYT
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYT
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 6.0e-89 | 89.89 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD P IVSE PVSETVDT NL CELE RRSKRQRTEKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALN V S MWKEAIKSELDSL M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRALIALAAIYNLLIHQMDVKTAF
NHTW+LVDLPMGNKPIRCKWIFKRKTKPNG IERYK RLVVVGYTQKQG+DYFDTYSPVTKITTIRALIALAAI+NLLIHQMDVKTAF
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRALIALAAIYNLLIHQMDVKTAF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T166 Ty1-copia retrotransposon protein | 6.3e-76 | 87.35 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD P IVSE PVSE VDT NL CELE RRSKRQRTEKSFGPDFLSTFIVE RDEIDCNFTNL+LI+ED KTYQEALN V S MWKEAIKSELDSL M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIR
NHTW+LVDLPMGNKPIRCKWIFKRKTKPNG IERYK RLVVVGYTQKQG+DYFDTYSPVTKITTIR
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIR
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| A0A5A7T8N6 Ty1-copia retrotransposon protein | 8.2e-76 | 89.94 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD EN SIVSET VSE V+TSNLRCELELRRSKRQRTEKSF PDFLSTFIVE RDEID NFTNLYLIDEDPKTYQE LN V SMWKEAIKSELDSL+M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPV
NHTWDLVDLPMGNKPIRC+WIFKRKTKPNGS+ERYK RLVVVGYTQKQGIDYFDTYSPV
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPV
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| A0A5A7TFH9 Ty1-copia retrotransposon protein | 2.6e-82 | 92.86 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD ENPSIVSE PVSETVDTSNLRCELELRRSKRQRTEKSFG DFLSTFIVE RDEID NFTNLYLIDEDPKTYQEALN V SMWKEAI SELDSL+M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRAL
NHTWDLVDLPM NKPIRCKWIFKRKTKPNGSIERYK RLVVVGYTQKQGIDYFDTYSPVTKITTIRAL
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRAL
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| A0A5D3BFX4 Ty1-copia retrotransposon protein | 3.8e-73 | 95.17 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD ENPSIVSETPVSETV+TSNLRCELEL RSKRQRTEKSFGPDFLSTFIVE RDEIDCNFTNLYLIDEDPKTYQEALN V SSMWKEAIKSELDSL+M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYT
NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYT
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYT
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 2.9e-89 | 89.89 | Show/hide |
Query: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
MHD P IVSE PVSETVDT NL CELE RRSKRQRTEKSFGPDFLSTFIVE RDEIDCNFTNL+LIDEDPKTYQEALN V S MWKEAIKSELDSL M
Subjt: MHDHENPSIVSETPVSETVDTSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIM
Query: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRALIALAAIYNLLIHQMDVKTAF
NHTW+LVDLPMGNKPIRCKWIFKRKTKPNG IERYK RLVVVGYTQKQG+DYFDTYSPVTKITTIRALIALAAI+NLLIHQMDVKTAF
Subjt: NHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRALIALAAIYNLLIHQMDVKTAF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 9.4e-21 | 34.33 | Show/hide |
Query: DHENPSIVSETP----VSETVD----------TSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDED-PKTYQEALNYVGSSMW
DH N S S P SET + T N E+ RRS+R +T+ + E + ++ N + I D P ++ E S W
Subjt: DHENPSIVSETP----VSETVD----------TSNLRCELELRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDED-PKTYQEALNYVGSSMW
Query: KEAIKSELDSLIMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRALIALAAIYNLLIHQMDVKTA
+EAI +EL++ +N+TW + P + +W+F K G+ RYK RLV G+TQK IDY +T++PV +I++ R +++L YNL +HQMDVKTA
Subjt: KEAIKSELDSLIMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRALIALAAIYNLLIHQMDVKTA
Query: F
F
Subjt: F
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.7e-26 | 40.88 | Show/hide |
Query: LRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIMNHTWDLVDLPMGNKPIRCKWIFKRKTKPN
LRRS+R R E P ST V D D +P++ +E L++ + +A++ E++SL N T+ LV+LP G +P++CKW+FK K +
Subjt: LRRSKRQRTEKSFGPDFLSTFIVETRDEIDCNFTNLYLIDEDPKTYQEALNYVGSSMWKEAIKSELDSLIMNHTWDLVDLPMGNKPIRCKWIFKRKTKPN
Query: GSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRALIALAAIYNLLIHQMDVKTAF
+ RYK RLVV G+ QK+GID+ + +SPV K+T+IR +++LAA +L + Q+DVKTAF
Subjt: GSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRALIALAAIYNLLIHQMDVKTAF
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.4e-16 | 40.95 | Show/hide |
Query: IDEDPKTYQEALNYVGSSMWKEAIKSELDSLIMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRA
I ++PK+ AL G W +A++ ELD+L N TW LV P+ + CKW+FK K +G+++R K RLV G+ Q++GI + +TYSPV + TIR
Subjt: IDEDPKTYQEALNYVGSSMWKEAIKSELDSLIMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRA
Query: LIALA
++ +A
Subjt: LIALA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.5e-21 | 42.98 | Show/hide |
Query: DEDPKTYQEALNYVGSSMWKEAIKSELDSLIMNHTWDLVDLPMGNKPI-RCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRA
+ +P+T +AL W+ A+ SE+++ I NHTWDLV P + I C+WIF +K +GS+ RYK RLV GY Q+ G+DY +T+SPV K T+IR
Subjt: DEDPKTYQEALNYVGSSMWKEAIKSELDSLIMNHTWDLVDLPMGNKPI-RCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRA
Query: LIALAAIYNLLIHQMDVKTAF
++ +A + I Q+DV AF
Subjt: LIALAAIYNLLIHQMDVKTAF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 9.4e-21 | 42.15 | Show/hide |
Query: DEDPKTYQEALNYVGSSMWKEAIKSELDSLIMNHTWDLVDLPMGNKPI-RCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRA
+ +P+T A+ + W++A+ SE+++ I NHTWDLV P + I C+WIF +K +GS+ RYK RLV GY Q+ G+DY +T+SPV K T+IR
Subjt: DEDPKTYQEALNYVGSSMWKEAIKSELDSLIMNHTWDLVDLPMGNKPI-RCKWIFKRKTKPNGSIERYKTRLVVVGYTQKQGIDYFDTYSPVTKITTIRA
Query: LIALAAIYNLLIHQMDVKTAF
++ +A + I Q+DV AF
Subjt: LIALAAIYNLLIHQMDVKTAF
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