| GenBank top hits | e value | %identity | Alignment |
|---|
| AQY61295.1 Pol [Coffea arabica] | 9.6e-57 | 80.74 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
MDKAH L+ PMVVR LD KD FRPRE+NEE+LG EVPYLSAIGALMYLAN TRPDI+F+VNLLAR+SSSPT+RHWNG+KH+ RYL+GTID+GLFYSNKS
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
+LVGYADA YLSDPHK RSQTGYLFT GGTAIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| AQY61300.1 Pol [Coffea eugenioides] | 2.8e-56 | 80 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
MDKAH L+ PMVVR LD KD FRPRE+NEE+LG EVPYLSAIG LMYLAN TRPDI+F+VNLLAR+SSSPT+RHWNG+KH+ RYL+GTID+GLFYSNKS
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
+LVGYADA YLSDPHK RSQTGYLFT GGTAIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| KAA0038947.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.3e-65 | 92.59 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
MDKAH LNIPMVVR LDVKKDIFRPREDNEELLG EVPYL+AIGALMYLANNTRPDI+FSVNLLARYSSSPTKRHWN VKHVLRYLRGTID+GLFYSNKS
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
NFDLVGYADA YLSDP K RSQTGYLFTCGGTAIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| KAA0067250.1 Pol [Cucumis melo var. makuwa] | 4.8e-64 | 92.59 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
MDKAHPLNIPMVVR LDVKKDIFRPREDNEELLG EVPYLSAIGALM LANNTRPDI FSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDM LFYSNKS
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
NFDLVGYADA YLSDP K RSQ GYLFT GGTAIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| TYK21506.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.2e-59 | 92.8 | Show/hide |
Query: MVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
M+VR LDVKKDIFRPREDNEELLG EVPYLSAIGALMYLANNTRPDI FSVNLLARYS SPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
Subjt: MVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
Query: EYLSDPHKVRSQTGYLFTCGGTAIS
+LSDPHK RSQTGYLFTC GTAIS
Subjt: EYLSDPHKVRSQTGYLFTCGGTAIS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FK49 Reverse transcriptase Ty1/copia-type domain-containing protein | 4.2e-58 | 85.19 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
MDKAHPL+ PMVVR LDVKKD FRP+E EE LG EVPYLSAIGALMYLAN TRPDI FSVNLLARYSS+PT RHWNGVKHVLRYLRGT DMGLFY NKS
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
N LVGYADA YLSDPHK RSQTGYLFTCG TAIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| A0A2N9J4G7 Reverse transcriptase Ty1/copia-type domain-containing protein | 4.2e-58 | 85.19 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
MDKAHPL+ PMVVR LDVKKD FRP+E EE LG EVPYLSAIGALMYLAN TRPDI FSVNLLARYSS+PT RHWNGVKHVLRYLRGT DMGLFY NKS
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
N LVGYADA YLSDPHK RSQTGYLFTCG TAIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| A0A5D3CGU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-65 | 92.59 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
MDKAH LNIPMVVR LDVKKDIFRPREDNEELLG EVPYL+AIGALMYLANNTRPDI+FSVNLLARYSSSPTKRHWN VKHVLRYLRGTID+GLFYSNKS
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
NFDLVGYADA YLSDP K RSQTGYLFTCGGTAIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| A0A5D3CKU4 Pol | 2.3e-64 | 92.59 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
MDKAHPLNIPMVVR LDVKKDIFRPREDNEELLG EVPYLSAIGALM LANNTRPDI FSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDM LFYSNKS
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
NFDLVGYADA YLSDP K RSQ GYLFT GGTAIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| A0A5D3DD63 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.9e-60 | 92.8 | Show/hide |
Query: MVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
M+VR LDVKKDIFRPREDNEELLG EVPYLSAIGALMYLANNTRPDI FSVNLLARYS SPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
Subjt: MVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADA
Query: EYLSDPHKVRSQTGYLFTCGGTAIS
+LSDPHK RSQTGYLFTC GTAIS
Subjt: EYLSDPHKVRSQTGYLFTCGGTAIS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.5e-17 | 43.12 | Show/hide |
Query: PREDNEELLGLE----VPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFD--LVGYADAEYLSDPHK
P + N ELL + P S IG LMY+ TRPD+T +VN+L+RYSS W +K VLRYL+GTIDM L + F+ ++GY D+++
Subjt: PREDNEELLGLE----VPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFD--LVGYADAEYLSDPHK
Query: VRSQTGYLF
+S TGYLF
Subjt: VRSQTGYLF
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| P0CV72 Secreted RxLR effector protein 161 | 9.8e-20 | 45.45 | Show/hide |
Query: VPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
VPYLSA+GA+MYL TRPD+ +V +L++++S P HW +K VLRYL+ T GL ++ LVGY+DA++ D RS +GYLF G +S
Subjt: VPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.4e-18 | 41.48 | Show/hide |
Query: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
M A P++ P+ KK P E+ +VPY SA+G+LMY TRPDI +V +++R+ +P K HW VK +LRYLRGT L + S
Subjt: MDKAHPLNIPMVVRPLDVKKDIFRPREDNEELLGLEVPYLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKS
Query: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
+ L GY DA+ D +S TGYLFT G AIS
Subjt: NFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-12 | 38.14 | Show/hide |
Query: YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
Y +G+L YLA TRPDI+++VN L+++ PT+ H +K +LRYL GT + G+F + L Y+DA++ D S GY+ G IS
Subjt: YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.5e-15 | 42.27 | Show/hide |
Query: YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
Y +G+L YLA TRPD++++VN L++Y PT HWN +K VLRYL GT D G+F + L Y+DA++ D S GY+ G IS
Subjt: YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 8.2e-14 | 40.21 | Show/hide |
Query: YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
Y IG LMYL TR DI+F+VN L+++S +P H V +L Y++GT+ GLFYS+++ L ++DA + S RS GY G + IS
Subjt: YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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| ATMG00240.1 Gag-Pol-related retrotransposon family protein | 2.7e-12 | 44.3 | Show/hide |
Query: MYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGY
MYL TRPD+TF+VN L+++SS+ V VL Y++GT+ GLFYS S+ L +AD+++ S P RS TG+
Subjt: MYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGY
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 6.5e-11 | 35.05 | Show/hide |
Query: YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
+ S +GAL YL TRPDI+++VN++ + PT ++ +K VLRY++GTI GL+ S ++ + D+++ RS TG+ G IS
Subjt: YLSAIGALMYLANNTRPDITFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVGYADAEYLSDPHKVRSQTGYLFTCGGTAIS
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