CuGenDBv2

Gene ID	Cmc03g0073111
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pol protein
Genome location	CMiso1.1chr03:20521931..20522572
RNA-Seq Expression	Cmc03g0073111
Synteny	Cmc03g0073111
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0043227 - membrane-bounded organelle (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AAO45752.1 pol protein [Cucumis melo subsp. melo]

4.8e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYG+CCRS VCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

KAA0035816.1 pol protein [Cucumis melo var. makuwa]

2.8e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFT+IWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPG+WDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSSVCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

KAA0040699.1 pol protein [Cucumis melo var. makuwa]

6.3e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCRS VCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

KAA0063715.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]

3.7e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QAT+GMAPFEALYGKCCRS VCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

KAA0066456.1 pol protein [Cucumis melo var. makuwa]

4.8e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYG+CCRS VCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T0S7 Reverse transcriptase

1.4e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFT+IWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPG+WDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCRSSVCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

A0A5A7THF3 Reverse transcriptase

3.0e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMG+RLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYGKCCRS VCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

A0A5A7VCR4 Ty3-gypsy retrotransposon protein

1.8e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QAT+GMAPFEALYGKCCRS VCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

A0A5A7VJE2 Reverse transcriptase

2.3e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYG+CCRS VCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

Q84KB0 Pol protein

2.3e-111

93.36

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKW QLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFST FHPQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
        LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNS+QATIGMAPFEALYG+CCRS VCWGEVGEQRLM PELVQSTNEAIQKIRSRMH  QSRQKSY DVR
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLEFDVGTR
        RKDLEF+VG +
Subjt:  RKDLEFDVGTR

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

3.8e-26

31.22

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFIT LP +  G+  ++VVVDR +K A  VP   + T  +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
         NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      S    E+      + E  Q T +  Q ++  ++    + K Y D++
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLE
         +++E
Subjt:  RKDLE

P0CT35 Transposon Tf2-2 polyprotein

3.8e-26

31.22

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFIT LP +  G+  ++VVVDR +K A  VP   + T  +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
         NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      S    E+      + E  Q T +  Q ++  ++    + K Y D++
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLE
         +++E
Subjt:  RKDLE

P0CT36 Transposon Tf2-3 polyprotein

3.8e-26

31.22

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFIT LP +  G+  ++VVVDR +K A  VP   + T  +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
         NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      S    E+      + E  Q T +  Q ++  ++    + K Y D++
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLE
         +++E
Subjt:  RKDLE

P0CT41 Transposon Tf2-12 polyprotein

3.8e-26

31.22

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFIT LP +  G+  ++VVVDR +K A  VP   + T  +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
         NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      S    E+      + E  Q T +  Q ++  ++    + K Y D++
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLE
         +++E
Subjt:  RKDLE

Q9UR07 Transposon Tf2-11 polyprotein

3.8e-26

31.22

Show/hide

Query:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER
        MDFIT LP +  G+  ++VVVDR +K A  VP   + T  +  +++   ++   G P  I++D D  FTS+ WK         + FS  + PQ DGQTER
Subjt:  MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTER

Query:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR
         NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++      S    E+      + E  Q T +  Q ++  ++    + K Y D++
Subjt:  LNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVR

Query:  RKDLE
         +++E
Subjt:  RKDLE

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTTCATTACAGGACTGCCAAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTTGACAGGCTTACCAAATCAGCGCACTTCGTTCCGGGTAAATCCACCTA
TACCACTAGTAAGTGGACACAGCTGTACATGTCTGAGATAGTGAGACTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTGGA
AGGGTTTGCAGACTGCTATGGGCACGAGGTTAGACTTTAGTACAGATTTCCATCCACAGAATGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGA
GCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTGCACTTGATGGAATTTGCTTATAATAACAGTTTTCAGGCTACTATTGGCATGGCACCATTTGAGGCCTT
GTACGGCAAATGTTGTAGATCCTCTGTTTGCTGGGGTGAGGTGGGGGAGCAGAGATTGATGAGTCCTGAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAAATCAGAT
CACGTATGCATATCCCACAGAGTAGGCAGAAGAGTTATGTGGATGTGAGACGGAAGGATCTTGAGTTTGATGTGGGGACAAGGTGTTCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWTQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTDFHPQNDGQTERLNQVLEDMLR
ACALEFPGSWDSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSSVCWGEVGEQRLMSPELVQSTNEAIQKIRSRMHIPQSRQKSYVDVRRKDLEFDVGTRCS

Cmc03g0073111 (gene) of Melon (Charmono) v1.1 genome