| GenBank top hits | e value | %identity | Alignment |
|---|
| KYP36562.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.5e-157 | 74.52 | Show/hide |
Query: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
+DSGCT HVSNTMQGF +T +PNE+F+FMGNRVKVPVEAVGTYRL L+TGHHL+L +T YVPS SRNL+SLSKLD GY F FGN CFSLFK+N IG
Subjt: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
Query: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
+ ILCD LYKL LD ++ E+LLTLHHN+GTKRS NE SA+LWH+RLGHIS+ER++RLIKNEIL +LDFTDL I VDCIKGKQTKH K ATRS+ LLE
Subjt: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
Query: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQY
I+HT ICGPFDV SFG E YFITFIDD+SRYGY+YLLHEKSQA+D L++++NEVERQLD+KVK++RSDRGGEYYG+ PGPFAK L+ GICAQY
Subjt: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQY
Query: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
TMPGTPQQNGV+ERRNRTLM+MVRSML NS+LP+ LWMYAL+TA YLLNRVPSK+V KT FELWT
Subjt: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| KYP65984.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.3e-153 | 76.2 | Show/hide |
Query: MQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIGSDILCDDLYKLK
MQGFL TRTT PNE+F+FMGNRVKVPVEAVGTYRL LDTGHHL+LF+T YVPS SRNL+SLSKLD +GY KFGN CFSL+K IGS ILCD LYKL
Subjt: MQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIGSDILCDDLYKLK
Query: LDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLEIIHTHICGPFDV
LDN+FAE+LLTLHHN+GTKR NE AYLWHKRLGH+SKER++RL+KNEIL DLDFTDL + VDCIKGKQTKH K ATRS+ LLEIIHT ICGPFDV
Subjt: LDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLEIIHTHICGPFDV
Query: PSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQYTMPGTPQQNGVA
SF E YFITFIDD+SRYGY+YLLH+KSQAI+ L+++I EVERQLD KVKI+RSDRGGEYYG+ PGPFAKFLE GICAQYTMPGTPQQNGV+
Subjt: PSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQYTMPGTPQQNGVA
Query: ERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
ER NRTL++MVRSML NSSL +SLW YAL++A YLLNRVPSK+VPKT FELWT
Subjt: ERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| RZC09906.1 B2 protein isoform D [Glycine soja] | 6.2e-151 | 75.21 | Show/hide |
Query: GFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIGSDILCDDLYKLKLD
GFL +T +PN++F+FMGNRVK PVEAVGTYRL LDTGHHL+L +T YVPS SRNL+SLSKLD +GY F FGN CFSLFK N IG+ +LCD LYKLKLD
Subjt: GFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIGSDILCDDLYKLKLD
Query: NIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLEIIHTHICGPFDVPS
++ E++LTLHHNVGTKRS NE SA+LWHKRLGHIS+ERI+RLIKNEIL DLDFTDL I VDCIKGKQTKH K ATRS+ LLEI+HT ICGPFDV S
Subjt: NIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLEIIHTHICGPFDVPS
Query: FGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYY------GKCPGPFAKFLESHGICAQYTMPGTPQQNGVAER
FG E YFITFIDD+SRYGY+YLLHEKSQA++ L++++NEVERQLDRKVKI+RSDR GEYY G+ GPFAK L+ GICAQYTMPGT QQNGV+ER
Subjt: FGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYY------GKCPGPFAKFLESHGICAQYTMPGTPQQNGVAER
Query: RNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
RNRTLM+MVRSMLINS+LPVSLWMYAL+TA YLLNRVPSK++PKT FELWT
Subjt: RNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| RZC12927.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform A [Glycine soja] | 6.0e-162 | 76.71 | Show/hide |
Query: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
+DSGCT HVSNTMQGFL +T +PNE+F+FMGNRVK PVEAVGTYRL LDTGHHL+L +T YVPS SRNL+SLSKLD +GY F FGN CFSLFK N IG
Subjt: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
Query: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
+ +LCD LYKLKLD ++ E++LTLHHNVGTKRS NE SA+LWHKRLGHIS+ERI+RLIKNEIL DLDFTDL I VDCIKGKQTKH K ATRS+ LLE
Subjt: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
Query: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQY
I+HT ICGPFDV SFG E YFITFIDD+SRYGY+YLLHEKSQA++ L++++NEVERQLDRKVKI+RSDRGGEYYG+ PGPFAK L+ GICAQY
Subjt: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQY
Query: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
TMPGTPQQNGV+ERRNRTLM+MVRSMLINS+LPVSLWMYAL+TA YLLN VPSK+VPKT FELWT
Subjt: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| RZC25410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja] | 6.6e-161 | 76.44 | Show/hide |
Query: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
+DSGCT HVSNTMQGFL +T +PNE+F+FMGNRVK PVEAVGTYRL LDTGHHL+L +T YVPS SRNL+SLSKLD +GY F FGN CFSLFK N IG
Subjt: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
Query: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
+ +LCD LYKLKLD ++ E++LTLHHNVGTKRS NE SA+LWHKRLGHIS ERI+RLIKNEIL DLDFTDL I VDCIKGKQTKH K ATRS+ LLE
Subjt: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
Query: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYY------GKCPGPFAKFLESHGICAQY
I+HT ICGPFDV SFG E YFITFIDD+SRYGY+YLLHEKSQA++ L++++NEVERQLDRKVKI+RSDRGGEYY G+ P PFAK L+ GICAQY
Subjt: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYY------GKCPGPFAKFLESHGICAQY
Query: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
TMPGTPQQNGV+ERRN+TLM+MVRSMLINS+LPVSLWMYAL+TA YLLNRVPSK+VPKT FELWT
Subjt: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151R237 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.3e-158 | 74.52 | Show/hide |
Query: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
+DSGCT HVSNTMQGF +T +PNE+F+FMGNRVKVPVEAVGTYRL L+TGHHL+L +T YVPS SRNL+SLSKLD GY F FGN CFSLFK+N IG
Subjt: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
Query: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
+ ILCD LYKL LD ++ E+LLTLHHN+GTKRS NE SA+LWH+RLGHIS+ER++RLIKNEIL +LDFTDL I VDCIKGKQTKH K ATRS+ LLE
Subjt: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
Query: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQY
I+HT ICGPFDV SFG E YFITFIDD+SRYGY+YLLHEKSQA+D L++++NEVERQLD+KVK++RSDRGGEYYG+ PGPFAK L+ GICAQY
Subjt: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQY
Query: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
TMPGTPQQNGV+ERRNRTLM+MVRSML NS+LP+ LWMYAL+TA YLLNRVPSK+V KT FELWT
Subjt: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| A0A151TG02 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.4e-154 | 76.2 | Show/hide |
Query: MQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIGSDILCDDLYKLK
MQGFL TRTT PNE+F+FMGNRVKVPVEAVGTYRL LDTGHHL+LF+T YVPS SRNL+SLSKLD +GY KFGN CFSL+K IGS ILCD LYKL
Subjt: MQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIGSDILCDDLYKLK
Query: LDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLEIIHTHICGPFDV
LDN+FAE+LLTLHHN+GTKR NE AYLWHKRLGH+SKER++RL+KNEIL DLDFTDL + VDCIKGKQTKH K ATRS+ LLEIIHT ICGPFDV
Subjt: LDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLEIIHTHICGPFDV
Query: PSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQYTMPGTPQQNGVA
SF E YFITFIDD+SRYGY+YLLH+KSQAI+ L+++I EVERQLD KVKI+RSDRGGEYYG+ PGPFAKFLE GICAQYTMPGTPQQNGV+
Subjt: PSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQYTMPGTPQQNGVA
Query: ERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
ER NRTL++MVRSML NSSL +SLW YAL++A YLLNRVPSK+VPKT FELWT
Subjt: ERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| A0A445KGB1 B2 protein isoform D | 3.0e-151 | 75.21 | Show/hide |
Query: GFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIGSDILCDDLYKLKLD
GFL +T +PN++F+FMGNRVK PVEAVGTYRL LDTGHHL+L +T YVPS SRNL+SLSKLD +GY F FGN CFSLFK N IG+ +LCD LYKLKLD
Subjt: GFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIGSDILCDDLYKLKLD
Query: NIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLEIIHTHICGPFDVPS
++ E++LTLHHNVGTKRS NE SA+LWHKRLGHIS+ERI+RLIKNEIL DLDFTDL I VDCIKGKQTKH K ATRS+ LLEI+HT ICGPFDV S
Subjt: NIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLEIIHTHICGPFDVPS
Query: FGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYY------GKCPGPFAKFLESHGICAQYTMPGTPQQNGVAER
FG E YFITFIDD+SRYGY+YLLHEKSQA++ L++++NEVERQLDRKVKI+RSDR GEYY G+ GPFAK L+ GICAQYTMPGT QQNGV+ER
Subjt: FGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYY------GKCPGPFAKFLESHGICAQYTMPGTPQQNGVAER
Query: RNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
RNRTLM+MVRSMLINS+LPVSLWMYAL+TA YLLNRVPSK++PKT FELWT
Subjt: RNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| A0A445KPR8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 isoform A | 2.9e-162 | 76.71 | Show/hide |
Query: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
+DSGCT HVSNTMQGFL +T +PNE+F+FMGNRVK PVEAVGTYRL LDTGHHL+L +T YVPS SRNL+SLSKLD +GY F FGN CFSLFK N IG
Subjt: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
Query: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
+ +LCD LYKLKLD ++ E++LTLHHNVGTKRS NE SA+LWHKRLGHIS+ERI+RLIKNEIL DLDFTDL I VDCIKGKQTKH K ATRS+ LLE
Subjt: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
Query: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQY
I+HT ICGPFDV SFG E YFITFIDD+SRYGY+YLLHEKSQA++ L++++NEVERQLDRKVKI+RSDRGGEYYG+ PGPFAK L+ GICAQY
Subjt: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKC------PGPFAKFLESHGICAQY
Query: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
TMPGTPQQNGV+ERRNRTLM+MVRSMLINS+LPVSLWMYAL+TA YLLN VPSK+VPKT FELWT
Subjt: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| A0A445LQ30 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.2e-161 | 76.44 | Show/hide |
Query: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
+DSGCT HVSNTMQGFL +T +PNE+F+FMGNRVK PVEAVGTYRL LDTGHHL+L +T YVPS SRNL+SLSKLD +GY F FGN CFSLFK N IG
Subjt: VDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFIG
Query: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
+ +LCD LYKLKLD ++ E++LTLHHNVGTKRS NE SA+LWHKRLGHIS ERI+RLIKNEIL DLDFTDL I VDCIKGKQTKH K ATRS+ LLE
Subjt: SDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLLE
Query: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYY------GKCPGPFAKFLESHGICAQY
I+HT ICGPFDV SFG E YFITFIDD+SRYGY+YLLHEKSQA++ L++++NEVERQLDRKVKI+RSDRGGEYY G+ P PFAK L+ GICAQY
Subjt: IIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYY------GKCPGPFAKFLESHGICAQY
Query: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
TMPGTPQQNGV+ERRN+TLM+MVRSMLINS+LPVSLWMYAL+TA YLLNRVPSK+VPKT FELWT
Subjt: TMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTHFELWT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.6e-32 | 27.64 | Show/hide |
Query: VVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFI
V+DSG + H+ N + + P + + G RL D H + L D + + NL+S+ +L +G +F ++ K + +
Subjt: VVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFI
Query: GSDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQD---LDFTDLG--IYVDCIKGKQTKHIVN--KEA
+ L + + N A S+ H N + LWH+R GHIS ++ + + + D L+ +L I C+ GKQ + K+
Subjt: GSDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQD---LDFTDLG--IYVDCIKGKQTKHIVN--KEA
Query: TRSSHLLEIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFLESHGICA
T L ++H+ +CGP + + YF+ F+D F+ Y YL+ KS + + F+ + E + KV L D G EY +F GI
Subjt: TRSSHLLEIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFLESHGICA
Query: QYTMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSV---PKTHFELW
T+P TPQ NGV+ER RT+ R+M+ + L S W A+ TA YL+NR+PS+++ KT +E+W
Subjt: QYTMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSV---PKTHFELW
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.5e-51 | 35.63 | Show/hide |
Query: VVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFI
VVD+ + H + L R + + MGN + +G + + G L L D +VP NLIS LD GY F N + L K ++ I
Subjt: VVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIFI
Query: GSDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLL
+ LY+ + G + +E S LWHKR+GH+S++ ++ L K ++ T + C+ GKQ + + R ++L
Subjt: GSDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYVDCIKGKQTKHIVNKEATRSSHLL
Query: EIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFLESHGICAQYTMPGT
+++++ +CGP ++ S GG YF+TFIDD SR ++Y+L K Q V + F VER+ RK+K LRSD GGEY + F ++ SHGI + T+PGT
Subjt: EIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFLESHGICAQYTMPGT
Query: PQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPS
PQ NGVAER NRT++ VRSML + LP S W A++TA YL+NR PS
Subjt: PQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPS
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| Q12501 Transposon Ty2-OR2 Gag-Pol polyprotein | 2.4e-25 | 25.82 | Show/hide |
Query: MVVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIF
+++DSG + + + +L T N +E I + +P+ A+G G ++ + P+ + +L+SLS+L F +
Subjt: MVVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKLDTSGYYFKFGNDCFSLFKQNIF
Query: IGSDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEIL-----QDLDFTDLGIY--VDCIKGKQTKHIVNK-
+ + D Y L + + L N K N+ L H+ LGH + I++ +K + D+++++ Y DC+ GK TKH K
Subjt: IGSDILCDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEIL-----QDLDFTDLGIY--VDCIKGKQTKHIVNK-
Query: ---EATRSSHLLEIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQ--AIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFL
+ S + +HT I GP YFI+F D+ +R+ ++Y LH++ + ++V + ++ Q + +V +++ DRG EY K KF
Subjt: ---EATRSSHLLEIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQ--AIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFL
Query: ESHGICAQYTMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKT
+ GI A YT + +GVAER NRTL+N R++L S LP LW A+ + + N + S K+
Subjt: ESHGICAQYTMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKT
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.3e-28 | 25.71 | Show/hide |
Query: VVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKL-DTSGYYFKFGNDCFSLFKQNIF
++DSG T H+++ + + + + + + +P+ G+ L+ + LNL + YVP+ +NLIS+ +L + +G +F F + +++
Subjt: VVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKL-DTSGYYFKFGNDCFSLFKQNIF
Query: IGSDIL----CDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYV-DCIKGKQTKHIVNKEAT
G +L D+LY+ + + SL S +++++ WH RLGH + + +I N L L+ + + DC+ K K ++
Subjt: IGSDIL----CDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFTDLGIYV-DCIKGKQTKHIVNKEAT
Query: RSSHLLEIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFLESHGICAQ
S+ LE I++ + + S Y++ F+D F+RY ++Y L +KSQ + F N +E + ++ SD GGE+ ++ HGI
Subjt: RSSHLLEIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFLESHGICAQ
Query: YTMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPS
+ P TP+ NG++ER++R ++ ++L ++S+P + W YA A YL+NR+P+
Subjt: YTMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.1e-28 | 27.4 | Show/hide |
Query: VVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKL-DTSGYYFKFGNDCFSLFKQNIF
++DSG T H+++ + + + + + +P+ G+ L + L+L YVP+ +NLIS+ +L +T+ +F F + +++
Subjt: VVDSGCTIHVSNTMQGFLMTRTTNPNERFIFMGNRVKVPVEAVGTYRLTLDTGHHLNLFDTFYVPSFSRNLISLSKL-DTSGYYFKFGNDCFSLFKQNIF
Query: IGSDIL----CDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFT-DLGIYVDCIKGKQTKHIVNKEAT
G +L D+LY+ + + A S+ S ++++ WH RLGH S + +I N L L+ + L DC K K +
Subjt: IGSDIL----CDDLYKLKLDNIFAESLLTLHHNVGTKRSQTNESSAYLWHKRLGHISKERIKRLIKNEILQDLDFT-DLGIYVDCIKGKQTKHIVNKEAT
Query: RSSHLLEIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFLESHGICAQ
SS LE I++ + + S Y++ F+D F+RY ++Y L +KSQ D +F + VE + ++ L SD GGE+ +L HGI
Subjt: RSSHLLEIIHTHICGPFDVPSFGGEMYFITFIDDFSRYGYIYLLHEKSQAIDVLKVFINEVERQLDRKVKILRSDRGGEYYGKCPGPFAKFLESHGICAQ
Query: YTMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPS
+ P TP+ NG++ER++R ++ M ++L ++S+P + W YA A YL+NR+P+
Subjt: YTMPGTPQQNGVAERRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPS
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