| GenBank top hits | e value | %identity | Alignment |
|---|
| AAT38758.1 Putative gag-pol polyprotein, identical [Solanum demissum] | 8.1e-51 | 54.63 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
++TRKSFP+GK+WRA+ CLEL++ FE FK FKA VE QSG IKSL +DRGGEFLSN+FNL
Subjt: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
Query: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
FC+E+GI RELT PYT EQNGVA RK+R V+EM RS L+ KGL + F EAV+T +Y LNISPTK V NTT EA GKK VSHLR+FGCI++ALV
Subjt: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
Query: VCKKLDKKSVKCIFVG
KLD+KS KCIFVG
Subjt: VCKKLDKKSVKCIFVG
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| KAG7559774.1 Integrase catalytic core [Arabidopsis thaliana x Arabidopsis arenosa] | 2.2e-48 | 50.93 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIYK-------------------------------------VAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
++TRKSFP+G+A RA++CLE+++ AFE FK FKA VEKQSG +K L +DRGGEF S FN
Subjt: EKTRKSFPIGKAWRASKCLELIYK-------------------------------------VAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
Query: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
FC+ GI+ ELTT YT EQNGVA RK+R V+EM RSML+ K L N F AE+V T++YLLNISPTK V+N T +EA CG+K VSHLRVFG ++++LV S
Subjt: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
Query: VCKKLDKKSVKCIFVG
KKLD+KS KC+F+G
Subjt: VCKKLDKKSVKCIFVG
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| KAG7566530.1 F-box associated domain type 3 [Arabidopsis suecica] | 1.7e-48 | 51.85 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIY------------------------------------KV-AFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
++TRKSFP+G+A RA++CLE+++ KV AFE FK FKA VEKQSG +K L +DRGGEF S FN
Subjt: EKTRKSFPIGKAWRASKCLELIY------------------------------------KV-AFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
Query: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
FC+ GI+ ELTT YT EQNGVA RK+R V+EM RSML+ K L N F AE+V T++YLLNISPTK V+N T +EA CG+K VSHLRVFG ++++LV S
Subjt: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
Query: VCKKLDKKSVKCIFVG
KKLD+KS KC+F+G
Subjt: VCKKLDKKSVKCIFVG
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| KAG7597740.1 Ribonuclease H-like superfamily [Arabidopsis suecica] | 2.2e-48 | 50.93 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIYK-------------------------------------VAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
++TRKSFP+G+A RA++CLE+++ AFE FK FKA VEKQSG +K L +DRGGEF S FN
Subjt: EKTRKSFPIGKAWRASKCLELIYK-------------------------------------VAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
Query: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
FC+ GI+ ELTT YT EQNGVA RK+R V+EM RSML+ K L N F AE+V T++YLLNISPTK V+N T +EA CG+K VSHLRVFG ++++LV S
Subjt: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
Query: VCKKLDKKSVKCIFVG
KKLD+KS KC+F+G
Subjt: VCKKLDKKSVKCIFVG
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| TYK00906.1 putative gag-pol polyprotein, identical [Cucumis melo var. makuwa] | 1.9e-63 | 75.56 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIY-KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRS
++TRKSFPIGKA RASKCLELI+ + K +KQSGMFIKSL SDRGGEFLSNNFN FCK+HGI+RELTTPYT EQNGVA RK+R V+EM RS
Subjt: EKTRKSFPIGKAWRASKCLELIY-KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRS
Query: MLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
MLQ+KGLSN F AEAVSTSIYLLNISPTK VMN T FE GKK NV+HLRVFGCIS+ALVPSQV +KLDKKS KCIFVG
Subjt: MLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0V0IV83 Putative ovule protein (Fragment) | 2.4e-56 | 57.87 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
++TRKSFP+GKAWRASKCLELIY FEKF+ FKA VE QS IK L DRGGEF+SN FNL
Subjt: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
Query: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
FC+ +GI+RELTTPYT EQNGVA RK+R V+EM RSMLQ K L+N F AEAV+ SIYLLN+SPTKVVMN T +EA +K NVSHLRVFGC+++ALV SQ
Subjt: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
Query: VCKKLDKKSVKCIFVG
+KLD+KS KCIF+G
Subjt: VCKKLDKKSVKCIFVG
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| A0A5D3BRM6 Putative gag-pol polyprotein, identical | 9.0e-64 | 75.56 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIY-KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRS
++TRKSFPIGKA RASKCLELI+ + K +KQSGMFIKSL SDRGGEFLSNNFN FCK+HGI+RELTTPYT EQNGVA RK+R V+EM RS
Subjt: EKTRKSFPIGKAWRASKCLELIY-KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRS
Query: MLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
MLQ+KGLSN F AEAVSTSIYLLNISPTK VMN T FE GKK NV+HLRVFGCIS+ALVPSQV +KLDKKS KCIFVG
Subjt: MLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
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| A0A5D3DWP2 Putative gag-pol polyprotein, identical | 9.0e-48 | 64.37 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
++TRKSFPIGKAWRASKCLELI+ FEKFKHFKAKVEKQSGMFIKSL SDRG EFLSNNFN
Subjt: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
Query: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFE
FCKEHGI+RELTTPYT EQNGVA RK++ V+EM RSMLQ+KGL N F AEAVS SIYLLNISPTK VMN T FE
Subjt: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFE
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| A0A7C8Z9K0 Integrase catalytic domain-containing protein (Fragment) | 1.3e-49 | 52.31 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
++ R SFP+GKAWRAS CLELI+ AFE FK FK VEKQS IK+L +DRGGEF S F++
Subjt: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
Query: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
FC+EHGI+RELT PYT EQNGVA RK+R ++EM RSM+ + + F AEAV+T++YLLNISPTK V T +EA G K VSHLRVFGCI++ALV SQ
Subjt: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
Query: VCKKLDKKSVKCIFVG
+ KLD+KS KCIFVG
Subjt: VCKKLDKKSVKCIFVG
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| Q6L3N8 Putative gag-pol polyprotein, identical | 3.9e-51 | 54.63 | Show/hide |
Query: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
++TRKSFP+GK+WRA+ CLEL++ FE FK FKA VE QSG IKSL +DRGGEFLSN+FNL
Subjt: EKTRKSFPIGKAWRASKCLELIY-------------------------------------KVAFEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNL
Query: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
FC+E+GI RELT PYT EQNGVA RK+R V+EM RS L+ KGL + F EAV+T +Y LNISPTK V NTT EA GKK VSHLR+FGCI++ALV
Subjt: FCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPTKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQ
Query: VCKKLDKKSVKCIFVG
KLD+KS KCIFVG
Subjt: VCKKLDKKSVKCIFVG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.3e-29 | 44.44 | Show/hide |
Query: FEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISP
F+ F+ F A VE+++G +K L SD GGE+ S F +C HGI E T P T + NGVA R +R ++E VRSML++ L F EAV T+ YL+N SP
Subjt: FEKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISP
Query: TKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
+ + K+ + SHL+VFGC +FA VP + KLD KS+ CIF+G
Subjt: TKVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.3e-15 | 32.24 | Show/hide |
Query: EKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPT
E F FK +E + I + +SD GGEF++ + +HGI+ + P+T E NG++ RK R ++E ++L + + A + ++YL+N PT
Subjt: EKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPT
Query: KVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
++ + F+ L G N LRVFGC + + KLD KS +C+F+G
Subjt: KVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.8e-16 | 32.89 | Show/hide |
Query: EKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPT
+ F FK+ VE + I +L+SD GGEF+ + +HGI+ + P+T E NG++ RK R ++EM ++L + + A S ++YL+N PT
Subjt: EKFKHFKAKVEKQSGMFIKSLHSDRGGEFLSNNFNLFCKEHGINRELTTPYTLEQNGVAGRKSRIVLEMVRSMLQVKGLSNIFCAEAVSTSIYLLNISPT
Query: KVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
++ + F+ L G+ N L+VFGC + + KL+ KS +C F+G
Subjt: KVVMNTTTFEALCGKKSNVSHLRVFGCISFALVPSQVCKKLDKKSVKCIFVG
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