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Cmc03g0073191 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0073191
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotransposon protein
Genome locationCMiso1.1chr03:20628975..20632804
RNA-Seq ExpressionCmc03g0073191
SyntenyCmc03g0073191
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035700.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-3067.29Show/hide
Query:  KSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDR
        K+ASS RKK  +I+HPAAK LLNKSF HY E  YVFGK  ATG RVE FA++GSNDPA Y+AFAA+AAPD  F P+Y+  L MSPD+LM TR ARVS+ R
Subjt:  KSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDR

Query:  HVSNGSK
        +VS+GSK
Subjt:  HVSNGSK

KAA0046849.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-4495.74Show/hide
Query:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK
        SHPAAKDLLNKSFPHYKERPYVFGKGHATGAR EIFAEVGSNDPARY AFAANA PDIEFQP+YNQGLVMSPDELMGTRVARVSKDRHVSNGSK
Subjt:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]9.6e-3173.4Show/hide
Query:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK
        SHPAAK LLNKSFPHY E  YVF K HATG R E FA+VGSNDP  Y+AFAANAA D +FQP+Y++GL MSPDELMGTR ARVS+ R+VS+GSK
Subjt:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK

KAA0052248.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-3072.34Show/hide
Query:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK
        SHPA K LL K FPHY E  YVFGK  A GA+VE FA++G NDPARYEAFAANAA D++FQP+Y+QGL MSPDELMGTR  RVSK R+VS+GSK
Subjt:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK

KAA0055484.1 retrotransposon protein [Cucumis melo var. makuwa]4.3e-3168.22Show/hide
Query:  KSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDR
        K+ASSQRKK   I HPAAK LLNKSF HY E  YVFGK  ATG RVE FA++GSND A Y+AFAA+ APD +F P+Y+QGL MSPD+LMGTR ARVS+ R
Subjt:  KSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDR

Query:  HVSNGSK
        +VS+ SK
Subjt:  HVSNGSK

TrEMBL top hitse value%identityAlignment
A0A5A7TZA5 Retrotransposon protein4.6e-3173.4Show/hide
Query:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK
        SHPAAK LLNKSFPHY E  YVF K HATG R E FA+VGSNDP  Y+AFAANAA D +FQP+Y++GL MSPDELMGTR ARVS+ R+VS+GSK
Subjt:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK

A0A5A7U033 Retrotransposon protein1.3e-4495.74Show/hide
Query:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK
        SHPAAKDLLNKSFPHYKERPYVFGKGHATGAR EIFAEVGSNDPARY AFAANA PDIEFQP+YNQGLVMSPDELMGTRVARVSKDRHVSNGSK
Subjt:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK

A0A5D3BSM9 Retrotransposon protein3.0e-3072.34Show/hide
Query:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK
        SHPA K LL K FPHY E  YVFGK  A GA+VE FA++G NDPARYEAFAANAA D++FQP+Y+QGL MSPDELMGTR  RVSK R+VS+GSK
Subjt:  SHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK

A0A5D3CCL4 Retrotransposon protein2.1e-3168.22Show/hide
Query:  KSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDR
        K+ASSQRKK   I HPAAK LLNKSF HY E  YVFGK  ATG RVE FA++GSND A Y+AFAA+ APD +F P+Y+QGL MSPD+LMGTR ARVS+ R
Subjt:  KSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDR

Query:  HVSNGSK
        +VS+ SK
Subjt:  HVSNGSK

A0A5D3E5C1 Retrotransposon protein1.3e-3067.29Show/hide
Query:  KSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDR
        K+ASS RKK  +I+HPAAK LLNKSF HY E  YVFGK  ATG RVE FA++GSNDPA Y+AFAA+AAPD  F P+Y+  L MSPD+LM TR ARVS+ R
Subjt:  KSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDR

Query:  HVSNGSK
        +VS+GSK
Subjt:  HVSNGSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAAAGTGCATCGTCGCAGAGAAAGAAGTGTTCAATGATTAGTCATCCGGCAGCGAAGGACCTCCTTAATAAGTCGTTTCCCCACTATAAAGAACGGCCGTATGT
TTTTGGCAAAGGTCATGCGACGGGAGCCCGGGTCGAGATTTTTGCAGAAGTTGGGTCTAATGATCCTGCTAGGTATGAGGCATTTGCCGCTAACGCTGCACCGGATATAG
AATTCCAGCCTTTGTACAATCAGGGATTGGTCATGTCACCTGACGAATTAATGGGAACAAGAGTCGCTCGGGTAAGTAAGGATAGACATGTTTCGAACGGGTCTAAGTAG
mRNA sequenceShow/hide mRNA sequence
TTTTACCTATCTTCTCCTACCCATTTTCCTTACTACAACCCTAGTAACCCTATAGAGTCATCCGGTCGATTTCCCTCGTTTTCCTTTTCTTTTCCGTTCCATTTTCCTCC
ATCTTCCTCTGACTATCTTCCCCAATTTTCGATCTCATCTCCCTTCCTCTTCACTCTTAAATGAAATGAAAGGAAATTTACATTTCCTTCCTTCTTTTTTCGAAGCATCG
GCCCGTGTTGTTCGTGTGCGATTTTTGCCCTACTTTTCTCGATTTTTGTGTCCCTGCCCTTGAAACCCATTTCCGTTTTACAATAGTGGCATTTTGACACTGCCTTCGAA
ACAAAACTCACCCTCTCTCACGGTTGTGTTTCGTTGATCGATTGTCATAAACGTGTGTTACCTCCAAAACGCTTCTCATCCTTTCTCCATCTTTCCAATGAACCCTTGTC
GCTTCCCATCCTTGACGGTCCAAGAACGAGTTCACTACACTTTTCTTTCGATCGAACGACCATTAATGTCACAGATGCTACACTTGCTTGGTGAATGAAAGTCGAGTAGG
GGCACCATGGCAGGGGTCATCGATGTACACCGAAGATGAGACGTTTATCAAAGTCAACGTTCCAGCAAGTGAGCGGGCTAGGTATAGAACACACAAGGGGGAGGTCGCTA
CAAATGTCCTTGGCCTGACACGAAAGTAGATTCCGTTTATGTACTTGTCGGTTGGGAAGGATCAACTGTAGACTCATGCATCCTTCGCGATGTCATTTCAAGACTTAATG
GCCTGAAGGTGTCCAAGGGTAACTACCTATGACACTAGGGTTTCCTGACACCCTACAAAGGCCAATGCTACCACTTGCAGAAATGACGTGGTGTTGAAAATGCACCTTTA
ACGTCCAAAAAGTTCTTCAATATGAAGCATTCGTCTGCGCATAATGTAATCGAAAAAGCATTCGGTGTCTTGAAGATTCGGTGGGCGATACTGAGGAAAAAGTCATACTA
CCCTATAGAAGTCTAATGTTGCACAATACTCGCATGTTGTCTGCTGCACAACCTTATCAATAGGGAAATGACAAACTTCGATATACTAGACGACATAGATGAGGTTGATT
CAACCCACGAGACTACTGTCAGCGATGACATACATTACATGGAGACCTCCAACGAGTGGAGCCAGTGGAGGGATGAGCTTGCAGATGAAATGTTTAGTGACTGGGAGTTG
CGTAACAAGTAGAACAATTATCATGACAACTGCATCAAGACTACCTAAGCACAAAAGAGGAAGAGGTACCTAAATCAACTTGCGAGAATGATGGCCTTCAAGATCCCAAA
TTGTAACGTTCATACTTCAACGATTGATAGGTGAATAAAATTGTTGAAGAGAATGTTTCATGTGCTAGCCGAGATGCATGACCTGACCTATAGTGGGTTTGGGTGGAACG
ATGAATAAAAGTGCATCGTCGCAGAGAAAGAAGTGTTCAATGATTAGTCATCCGGCAGCGAAGGACCTCCTTAATAAGTCGTTTCCCCACTATAAAGAACGGCCGTATGT
TTTTGGCAAAGGTCATGCGACGGGAGCCCGGGTCGAGATTTTTGCAGAAGTTGGGTCTAATGATCCTGCTAGGTATGAGGCATTTGCCGCTAACGCTGCACCGGATATAG
AATTCCAGCCTTTGTACAATCAGGGATTGGTCATGTCACCTGACGAATTAATGGGAACAAGAGTCGCTCGGGTAAGTAAGGATAGACATGTTTCGAACGGGTCTAAGTAG
AAACGTGGAGGACAGCTCATAGACAATGGGGACGTAATTCCGACTGCGATTGAGTACGTAAATGTACAACTTAACCGCATTACTAACGAGCCTGTCCTAGTTGGAGGCCA
AACATGACAAGAGGTCATCTGACAGTTGAGGGCCATCCCTGAGCTGACATTGATGGATAGGTGTCGCTTAATGCGTATAGCGATGTGTAACGTGGACGACATGAAAGCTT
TCCTTGACGTTCCCAACAAAATGAAGTTCCTGTACTACAACATTATTCTTAAGAAAACTCATGACCACTTTGTTTTTTCTATTTGTATCAGTGGTTTTTCAGACTTTGAC
TATTTGTTCTTCTTATTACGTGTTTTTGTCTTCTTATCGTATGAACTTCTCTTTGTATTCAAGCTTTTATGGTATGTATTTTCGTTCTGCTTTCATATGTAATAGTATCA
TATTGTTCTACTAT
Protein sequenceShow/hide protein sequence
MNKSASSQRKKCSMISHPAAKDLLNKSFPHYKERPYVFGKGHATGARVEIFAEVGSNDPARYEAFAANAAPDIEFQPLYNQGLVMSPDELMGTRVARVSKDRHVSNGSK