; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0073301 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0073301
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr03:20740433..20742651
RNA-Seq ExpressionCmc03g0073301
SyntenyCmc03g0073301
Gene Ontology termsGO:0009231 - riboflavin biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004491 - methylmalonate-semialdehyde dehydrogenase (acylating) activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR025724 - GAG-pre-integrase domain
IPR036397 - Ribonuclease H superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP36562.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]5.6e-29771.81Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGF T +  +PNE+ +FMGNRVKVPVEAVGTYRL L+TGHHLDL  T YVPS+SRNL+SLSKLD  GY F FGN CFSLFK+N+ IG+GILCD LYKL 
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        LD ++ E+LLTLHHN+GTK   +NE SA+LWH+RLGHIS+ER++RLIKNEILP+LDFTDL ICVDCIKGKQTKHT  K ATRS+QLLEI+HTDICGPFDV
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
         SFG EKYFITFIDD+SRYGY+YLLHEKSQA+DAL+I++NEVERQLD+KVK++RSDR GEYYG+Y+E GQ PGPFAK L+  GICAQYTM GTPQQNGV+
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +RRNRTLM+MVRSML NS+LP+ LWMYAL+TA YLLNRVPSK+V KTPFELWTGR PSLRHLHVWGCQ E+RIYNP EKKLD+RT SG+FIGYPEKSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITS-SQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRS
                                  GS  P+KVE++EVR+++P +  S ++V VP+ V++ NN +EQ  N       ++ NEP+ E+PQEI LRR  R 
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITS-SQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRS

Query:  RRSAISDDYLVYWHESEFDLSI-DNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYT
        +R AIS+DY+VY HE E D SI +NDP+SFSQA+  DNS KWL+AMKEELKSM  N+ WDLVE P+  KRVGCKWVFKTKRDS+GN+ERYKARLVAKG+T
Subjt:  RRSAISDDYLVYWHESEFDLSI-DNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYT

Query:  QKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFK
        QKD IDYKETFSPVS+KDS RIIMALVAHYDLEL+Q+DVKTAFLNGNL+E V+MDQP  F VEGKEHMVCKLK+SIYGLKQASRQWYLKFNDTI SFGF 
Subjt:  QKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFK

Query:  ENIVDR
        ENIVDR
Subjt:  ENIVDR

KYP65984.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]0.0e+0074.29Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGFLTTR T PNE+ +FMGNRVKVPVEAVGTYRL LDTGHHLDL+ T YVPSISRNL+SLSKLD +GY  KFGN CFSL+K  + IGSGILCD LYKL 
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        LDN+FAE+LLTLHHN+GTK G  NE  AYLWHKRLGH+SKER++RL+KNEILPDLDFTDL +CVDCIKGKQTKHT  K ATRS+QLLEIIHTDICGPFDV
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
         SF  EKYFITFIDD+SRYGY+YLLH+KSQAI+AL+I+I EVERQLD KVKI+RSDR GEYYG+YDE GQ PGPFAKFLE  GICAQYTM GTPQQNGV+
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +R NRTL++MVRSML NSSL +SLW YAL++A YLLNRVPSK+VPKTPFELWTGRKPSLRHLHVWGC  ++R YNP EKKLD+RT +G+FIGYPEKSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR
                                  GS  PRKVEIQE+RV++P +  S++VVVP V++ +NN +EQQ N    HN++  NEP+ EEPQ+I LRR  R R
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR

Query:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK
        RSAI +DY+VY  ESE DL I+NDP++FSQAI GDN+ KWLDAMK ELKSM  N  WD VE P+  KRVGCKWVFKTKRDS+GN+E YKARLVAKG+TQK
Subjt:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK

Query:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN
        + IDYKETFSPVSKKDSLRIIMALVAHYDLEL+QMDVKTAFLNG+L+E+V+MDQP GF+ +GKEHMVCKLK+SIYGLKQASRQWYLKFNDTI SFGFKEN
Subjt:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN

Query:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK
        IVDRCIYLK+SGSKFI LVLYVDDILL TND  LL +TK
Subjt:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK

RVW55286.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]2.1e-28866.71Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGFLTTR    +E+ ++MGNR+KV V AVGTYRL L+TGH +DL  TFYVPSISRNL+SLSKLD +GY   F +   SL   +  +GSGILCD LYK+ 
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        L++ FA++L+TLH NVG+K G INE+S+ LWH+RLGHIS+ERI+RL+K  IL +LDFTD  +CVDCIKGKQTKHT  K ATRS++LLEIIH DICGP  V
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
        P F GEKYFITFIDD SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR GEYYG+YDE+GQ PGPFAKFLE HGI AQYTM GTPQQNGVA
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +RRNRTLM MVRSM+  SS+P+SLW  AL+TA Y+LNRVPSK+VPKTPFELWTGRKPSLRH+H+WGC  E RIYNPHEKKLDSRT SG+FIGYP+KSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR
                                  GS EPRKV+I+E+RV+IP      +++VP  V  V + ++   +   P  +I   E V E PQ   LRR  R R
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR

Query:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK
        R AI+DDY+VY  ES++D+ I  DP+SFSQA++ D+S+KW++AM EELKSM  N  WDL+E P   K VGCKWVFKTKRD+ GNIER+KARLVAKG+TQK
Subjt:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK

Query:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN
        + IDYK+TFSPVSKKDSLRIIMALVAH+DLEL+QMDVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK+SIYGLKQASRQWY+KFN+TITSFGFKEN
Subjt:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN

Query:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK
        IVD+CIYLK+SGSKFI L+LYVDDILL ++D  LL +TK
Subjt:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK

RVX08602.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]9.6e-28966.85Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGFLTTR    +E+ ++MGNR+KV V AVGTYRL L+TGH +DL  TFYVPSISRNL+SLSKLD +GY   F +   SL      +GSGILCD LYK+ 
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        L++ FA++L+TLH NVG+K G INE+S+ LWH+RLGHIS+ERI+RL+K  IL +LDFTD  +CVDCIKGKQTKHT  K ATRS++LLEIIHTDICGP  V
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
        P F GEKYFITFIDD SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR GEYYG+YDE+GQ PGPFAKFLE HGI AQYTM GTPQQNGVA
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +RRNRTLM MVRSM+  SS+P+SLW  AL+TA Y+LNRVPSK+VPKTPFELWTGRKPSLRH+H+WGC  E RIYNPHEKKLDSRT SG+FIGYP+KSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR
                                  GS EPRKV+I+E+RV+IP      +++VP  V  V + ++   +   P  +I   E V E PQ   LRR  R R
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR

Query:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK
        R AI+DDY+VY  ES++D+ I  DP+SFSQA++ D+S+KW++AM EELKSM  N  WDL+E P   K VGCKWVFKTKRD+ GNIER+KARLVAKG+TQK
Subjt:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK

Query:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN
        + IDYK+TFSPVSKKDSLRIIMALVAH+DLEL+QMDVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK+SIYGLKQASRQWY+KFN+TITSFGFKEN
Subjt:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN

Query:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK
        IVD+CIYLK+SGSKFI L+LYVDDILL ++D  LL +TK
Subjt:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK

RZC25410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]0.0e+0072.51Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGFLT +  +PNE+ +FMGNRVK PVEAVGTYRL LDTGHHLDL  T YVPS+SRNL+SLSKLD +GY F FGN CFSLFK N+ IG+G+LCD LYKLK
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        LD ++ E++LTLHHNVGTK   +NE SA+LWHKRLGHIS ERI+RLIKNEILPDLDFTDL ICVDCIKGKQTKHT  K ATRS+QLLEI+HTDICGPFDV
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
         SFG E+YFITFIDD+SRYGY+YLLHEKSQA++AL+I++NEVERQLDRKVKI+RSDR GEYY +YDE GQ P PFAK L+  GICAQYTM GTPQQNGV+
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +RRN+TLM+MVRSMLINS+LPVSLWMYAL+TA YLLNRVPSK+VPKTPFELWT R PS+RHLHVWGCQ E+RIYNP E+KLD+RT SG+FIGYPEKSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHND--IVTNEPVTEEPQEIELRRFVR
                                  GS  PR+VEI+EVRV++P +  SS  V+   V A N+ +E Q      HND  ++ NEP+ EEPQE+ LR+  R
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHND--IVTNEPVTEEPQEIELRRFVR

Query:  SRRSAISDDYLVYWHESEFDLSI-DNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGY
         RR AIS+DY+VY HE+E +LSI DNDP+SFSQAI  DNS KWL+AMKEE+ SM  N+ WDLVE PK  KRVG KWVFKTKRDS+GN+ERYKARLVAKG+
Subjt:  SRRSAISDDYLVYWHESEFDLSI-DNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGY

Query:  TQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGF
        TQKD IDYKETFSPVS+KDS RIIMALVAHYDLEL+QMDVKTAFLNG+L+E+V+MDQP GF VEGKEHMVCKLK+SIYGLKQASRQWYLKFNDTI SFGF
Subjt:  TQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGF

Query:  KENIVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK
        KEN VDRC+YLK+SGSK + LVLYVDDILL TND  L  +TK
Subjt:  KENIVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK

TrEMBL top hitse value%identityAlignment
A0A151R237 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-29771.81Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGF T +  +PNE+ +FMGNRVKVPVEAVGTYRL L+TGHHLDL  T YVPS+SRNL+SLSKLD  GY F FGN CFSLFK+N+ IG+GILCD LYKL 
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        LD ++ E+LLTLHHN+GTK   +NE SA+LWH+RLGHIS+ER++RLIKNEILP+LDFTDL ICVDCIKGKQTKHT  K ATRS+QLLEI+HTDICGPFDV
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
         SFG EKYFITFIDD+SRYGY+YLLHEKSQA+DAL+I++NEVERQLD+KVK++RSDR GEYYG+Y+E GQ PGPFAK L+  GICAQYTM GTPQQNGV+
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +RRNRTLM+MVRSML NS+LP+ LWMYAL+TA YLLNRVPSK+V KTPFELWTGR PSLRHLHVWGCQ E+RIYNP EKKLD+RT SG+FIGYPEKSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITS-SQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRS
                                  GS  P+KVE++EVR+++P +  S ++V VP+ V++ NN +EQ  N       ++ NEP+ E+PQEI LRR  R 
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITS-SQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRS

Query:  RRSAISDDYLVYWHESEFDLSI-DNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYT
        +R AIS+DY+VY HE E D SI +NDP+SFSQA+  DNS KWL+AMKEELKSM  N+ WDLVE P+  KRVGCKWVFKTKRDS+GN+ERYKARLVAKG+T
Subjt:  RRSAISDDYLVYWHESEFDLSI-DNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYT

Query:  QKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFK
        QKD IDYKETFSPVS+KDS RIIMALVAHYDLEL+Q+DVKTAFLNGNL+E V+MDQP  F VEGKEHMVCKLK+SIYGLKQASRQWYLKFNDTI SFGF 
Subjt:  QKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFK

Query:  ENIVDR
        ENIVDR
Subjt:  ENIVDR

A0A151TG02 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0074.29Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGFLTTR T PNE+ +FMGNRVKVPVEAVGTYRL LDTGHHLDL+ T YVPSISRNL+SLSKLD +GY  KFGN CFSL+K  + IGSGILCD LYKL 
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        LDN+FAE+LLTLHHN+GTK G  NE  AYLWHKRLGH+SKER++RL+KNEILPDLDFTDL +CVDCIKGKQTKHT  K ATRS+QLLEIIHTDICGPFDV
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
         SF  EKYFITFIDD+SRYGY+YLLH+KSQAI+AL+I+I EVERQLD KVKI+RSDR GEYYG+YDE GQ PGPFAKFLE  GICAQYTM GTPQQNGV+
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +R NRTL++MVRSML NSSL +SLW YAL++A YLLNRVPSK+VPKTPFELWTGRKPSLRHLHVWGC  ++R YNP EKKLD+RT +G+FIGYPEKSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR
                                  GS  PRKVEIQE+RV++P +  S++VVVP V++ +NN +EQQ N    HN++  NEP+ EEPQ+I LRR  R R
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR

Query:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK
        RSAI +DY+VY  ESE DL I+NDP++FSQAI GDN+ KWLDAMK ELKSM  N  WD VE P+  KRVGCKWVFKTKRDS+GN+E YKARLVAKG+TQK
Subjt:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK

Query:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN
        + IDYKETFSPVSKKDSLRIIMALVAHYDLEL+QMDVKTAFLNG+L+E+V+MDQP GF+ +GKEHMVCKLK+SIYGLKQASRQWYLKFNDTI SFGFKEN
Subjt:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN

Query:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK
        IVDRCIYLK+SGSKFI LVLYVDDILL TND  LL +TK
Subjt:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK

A0A438F5W4 Retrovirus-related Pol polyprotein from transposon TNT 1-941.0e-28866.71Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGFLTTR    +E+ ++MGNR+KV V AVGTYRL L+TGH +DL  TFYVPSISRNL+SLSKLD +GY   F +   SL   +  +GSGILCD LYK+ 
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        L++ FA++L+TLH NVG+K G INE+S+ LWH+RLGHIS+ERI+RL+K  IL +LDFTD  +CVDCIKGKQTKHT  K ATRS++LLEIIH DICGP  V
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
        P F GEKYFITFIDD SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR GEYYG+YDE+GQ PGPFAKFLE HGI AQYTM GTPQQNGVA
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +RRNRTLM MVRSM+  SS+P+SLW  AL+TA Y+LNRVPSK+VPKTPFELWTGRKPSLRH+H+WGC  E RIYNPHEKKLDSRT SG+FIGYP+KSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR
                                  GS EPRKV+I+E+RV+IP      +++VP  V  V + ++   +   P  +I   E V E PQ   LRR  R R
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR

Query:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK
        R AI+DDY+VY  ES++D+ I  DP+SFSQA++ D+S+KW++AM EELKSM  N  WDL+E P   K VGCKWVFKTKRD+ GNIER+KARLVAKG+TQK
Subjt:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK

Query:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN
        + IDYK+TFSPVSKKDSLRIIMALVAH+DLEL+QMDVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK+SIYGLKQASRQWY+KFN+TITSFGFKEN
Subjt:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN

Query:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK
        IVD+CIYLK+SGSKFI L+LYVDDILL ++D  LL +TK
Subjt:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK

A0A438JI44 Retrovirus-related Pol polyprotein from transposon TNT 1-944.6e-28966.85Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGFLTTR    +E+ ++MGNR+KV V AVGTYRL L+TGH +DL  TFYVPSISRNL+SLSKLD +GY   F +   SL      +GSGILCD LYK+ 
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        L++ FA++L+TLH NVG+K G INE+S+ LWH+RLGHIS+ERI+RL+K  IL +LDFTD  +CVDCIKGKQTKHT  K ATRS++LLEIIHTDICGP  V
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
        P F GEKYFITFIDD SRYGY+YL+HEKSQAID  ++FI EVERQLD+K+KI+RSDR GEYYG+YDE+GQ PGPFAKFLE HGI AQYTM GTPQQNGVA
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +RRNRTLM MVRSM+  SS+P+SLW  AL+TA Y+LNRVPSK+VPKTPFELWTGRKPSLRH+H+WGC  E RIYNPHEKKLDSRT SG+FIGYP+KSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR
                                  GS EPRKV+I+E+RV+IP      +++VP  V  V + ++   +   P  +I   E V E PQ   LRR  R R
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHNDIVTNEPVTEEPQEIELRRFVRSR

Query:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK
        R AI+DDY+VY  ES++D+ I  DP+SFSQA++ D+S+KW++AM EELKSM  N  WDL+E P   K VGCKWVFKTKRD+ GNIER+KARLVAKG+TQK
Subjt:  RSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQK

Query:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN
        + IDYK+TFSPVSKKDSLRIIMALVAH+DLEL+QMDVKTAFLNGNLDE+++M+QPEGF  +G EH+VCKLK+SIYGLKQASRQWY+KFN+TITSFGFKEN
Subjt:  DDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKEN

Query:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK
        IVD+CIYLK+SGSKFI L+LYVDDILL ++D  LL +TK
Subjt:  IVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK

A0A445LQ30 Retrovirus-related Pol polyprotein from transposon TNT 1-940.0e+0072.51Show/hide
Query:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK
        MQGFLT +  +PNE+ +FMGNRVK PVEAVGTYRL LDTGHHLDL  T YVPS+SRNL+SLSKLD +GY F FGN CFSLFK N+ IG+G+LCD LYKLK
Subjt:  MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLK

Query:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV
        LD ++ E++LTLHHNVGTK   +NE SA+LWHKRLGHIS ERI+RLIKNEILPDLDFTDL ICVDCIKGKQTKHT  K ATRS+QLLEI+HTDICGPFDV
Subjt:  LDNVFAESLLTLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDV

Query:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA
         SFG E+YFITFIDD+SRYGY+YLLHEKSQA++AL+I++NEVERQLDRKVKI+RSDR GEYY +YDE GQ P PFAK L+  GICAQYTM GTPQQNGV+
Subjt:  PSFGGEKYFITFIDDFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVA

Query:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-
        +RRN+TLM+MVRSMLINS+LPVSLWMYAL+TA YLLNRVPSK+VPKTPFELWT R PS+RHLHVWGCQ E+RIYNP E+KLD+RT SG+FIGYPEKSKG 
Subjt:  KRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKG-

Query:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHND--IVTNEPVTEEPQEIELRRFVR
                                  GS  PR+VEI+EVRV++P +  SS  V+   V A N+ +E Q      HND  ++ NEP+ EEPQE+ LR+  R
Subjt:  --------------------------GSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQQINVQTPHND--IVTNEPVTEEPQEIELRRFVR

Query:  SRRSAISDDYLVYWHESEFDLSI-DNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGY
         RR AIS+DY+VY HE+E +LSI DNDP+SFSQAI  DNS KWL+AMKEE+ SM  N+ WDLVE PK  KRVG KWVFKTKRDS+GN+ERYKARLVAKG+
Subjt:  SRRSAISDDYLVYWHESEFDLSI-DNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGY

Query:  TQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGF
        TQKD IDYKETFSPVS+KDS RIIMALVAHYDLEL+QMDVKTAFLNG+L+E+V+MDQP GF VEGKEHMVCKLK+SIYGLKQASRQWYLKFNDTI SFGF
Subjt:  TQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGF

Query:  KENIVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK
        KEN VDRC+YLK+SGSK + LVLYVDDILL TND  L  +TK
Subjt:  KENIVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.7e-7828.84Show/hide
Query:  GTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFI--GSGILCDDLYKLKLDNVFAESLLTLHHNVGTKHGQINESSA
        G  RL  D  H + L    +    + NL+S+ +L  +G   +F     ++ K    +   SG+    L  + + N  A S+   H N           + 
Subjt:  GTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFI--GSGILCDDLYKLKLDNVFAESLLTLHHNVGTKHGQINESSA

Query:  YLWHKRLGHISKERIKRLIKNEILPD---LDFTDLG--ICVDCIKGKQTKHTVN--KEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYGY
         LWH+R GHIS  ++  + +  +  D   L+  +L   IC  C+ GKQ +      K+ T   + L ++H+D+CGP    +   + YF+ F+D F+ Y  
Subjt:  YLWHKRLGHISKERIKRLIKNEILPD---LDFTDLG--ICVDCIKGKQTKHTVN--KEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYGY

Query:  IYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSMLINSSLP
         YL+  KS      + F+ + E   + KV  L  D   EY               +F    GI    T+  TPQ NGV++R  RT+    R+M+  + L 
Subjt:  IYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSMLINSSLP

Query:  VSLWMYALRTAQYLLNRVPSKSV---PKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGY-PEKSK-GGSLEPRKVEIQEVRVEI
         S W  A+ TA YL+NR+PS+++    KTP+E+W  +KP L+HL V+G  V V I N  + K D ++    F+GY P   K   ++  + +  ++V V+ 
Subjt:  VSLWMYALRTAQYLLNRVPSKSV---PKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGY-PEKSK-GGSLEPRKVEIQEVRVEI

Query:  PSSITSSQVVVPVVV-------DAVNNPQEQQINVQTP---HNDIVTNEPVTEEPQEIELRRFVRSRRSAIS----------------------------
         + + S  V    V        +  N P + +  +QT     +    N    ++ +E E + F    R  I                             
Subjt:  PSSITSSQVVVPVVV-------DAVNNPQEQQINVQTP---HNDIVTNEPVTEEPQEIELRRFVRSRRSAIS----------------------------

Query:  -------DDYL--------------------------------------------------VYWHESEFDL--------SIDND-PISFSQAIKGDNSTK
               DD+L                                                  + ++E +  L        +I ND P SF +    D+ + 
Subjt:  -------DDYL--------------------------------------------------VYWHESEFDL--------SIDND-PISFSQAIKGDNSTK

Query:  WLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKT
        W +A+  EL +   N  W + + P+    V  +WVF  K +  GN  RYKARLVA+G+TQK  IDY+ETF+PV++  S R I++LV  Y+L+++QMDVKT
Subjt:  WLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKT

Query:  AFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISG--SKFIILVLYVDDILLTTND
        AFLNG L EE++M  P+G  +      VCKL ++IYGLKQA+R W+  F   +    F  + VDRCIY+   G  ++ I ++LYVDD+++ T D
Subjt:  AFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISG--SKFIILVLYVDDILLTTND

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-12036.73Show/hide
Query:  MGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLKLDNVFAESLLTLHHNVGT
        MGN     +  +G   +  + G  L L    +VP +  NLIS   LD  GY   F N+ + L K +  I  G+    LY+                N   
Subjt:  MGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLKLDNVFAESLLTLHHNVGT

Query:  KHGQIN----ESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFID
          G++N    E S  LWHKR+GH+S++ ++ L K  ++     T +  C  C+ GKQ + +    + R   +L+++++D+CGP ++ S GG KYF+TFID
Subjt:  KHGQIN----ESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFID

Query:  DFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSM
        D SR  ++Y+L  K Q     + F   VER+  RK+K LRSD  GEY  +          F ++  SHGI  + T+ GTPQ NGVA+R NRT++  VRSM
Subjt:  DFSRYGYIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSM

Query:  LINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKGGSL-EPRKVEI---
        L  + LP S W  A++TA YL+NR PS  +  + P  +WT ++ S  HL V+GC+    +      KLD ++    FIGY ++  G  L +P K ++   
Subjt:  LINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKGGSL-EPRKVEI---

Query:  -------QEVRVEIPSSITSSQVVVP---VVVDAVNNPQEQQINV-------QTPHNDIVTNEPVTEEPQEIE-----------LRRFVRSR---RSAIS
                EVR     S      ++P    +    NNP   +          + P   I   E + E  +E+E           LRR  R R   R   S
Subjt:  -------QEVRVEIPSSITSSQVVVP---VVVDAVNNPQEQQINV-------QTPHNDIVTNEPVTEEPQEIE-----------LRRFVRSR---RSAIS

Query:  DDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDY
         +Y++        +S D +P S  + +      + + AM+EE++S+  N  + LVE PK  + + CKWVFK K+D +  + RYKARLV KG+ QK  ID+
Subjt:  DDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDY

Query:  KETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRC
         E FSPV K  S+R I++L A  DLE+ Q+DVKTAFL+G+L+EE++M+QPEGF V GK+HMVCKL +S+YGLKQA RQWY+KF+  + S  + +   D C
Subjt:  KETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRC

Query:  IYLK-ISGSKFIILVLYVDDILLTTNDFDLLCQTK
        +Y K  S + FIIL+LYVDD+L+   D  L+ + K
Subjt:  IYLK-ISGSKFIILVLYVDDILLTTNDFDLLCQTK

Q12501 Transposon Ty2-OR2 Gag-Pol polyprotein3.3e-2624.81Show/hide
Query:  PNERL-IFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLKLDNVFAESLL
        PN  + I    +  +P+ A+G        G    +    + P+I+ +L+SLS+L        F             +   +   D Y L    +    + 
Subjt:  PNERL-IFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLKLDNVFAESLL

Query:  TLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLG-------ICVDCIKGKQTKHTVNK----EATRSSQLLEIIHTDICGPFD
         L  N   K   +N+    L H+ LGH +   I++ +K   +  L  +D+         C DC+ GK TKH   K    +   S +  + +HTDI GP  
Subjt:  TLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLG-------ICVDCIKGKQTKHTVNK----EATRSSQLLEIIHTDICGPFD

Query:  VPSFGGEKYFITFIDDFSRYGYIYLLHEKSQ--AIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQN
                YFI+F D+ +R+ ++Y LH++ +   ++     +  ++ Q + +V +++ DR  EY  K            KF  + GI A YT     + +
Subjt:  VPSFGGEKYFITFIDDFSRYGYIYLLHEKSQ--AIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQN

Query:  GVAKRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKS
        GVA+R NRTL+N  R++L  S LP  LW  A+  +  + N + S    K+  +        +  +  +G  V V  +NP + K+  R   G+ + +P ++
Subjt:  GVAKRRNRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKS

Query:  KGG
          G
Subjt:  KGG

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.8e-7026.35Show/hide
Query:  VPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKL-DTSGYYFKFGNECFSLFKQNNFIG--SGILCDDLYKLKLDNVFAESLLTLHHNVGTKHG
        +P+   G+  L+  +   L+L+   YVP+I +NLIS+ +L + +G   +F    F +   N  +    G   D+LY+  + +    SL     +  T   
Subjt:  VPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKL-DTSGYYFKFGNECFSLFKQNNFIG--SGILCDDLYKLKLDNVFAESLLTLHHNVGTKHG

Query:  QINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGI-CVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYG
                 WH RLGH +   +  +I N  L  L+ +   + C DC+  K  K   ++    S++ LE I++D+     + S    +Y++ F+D F+RY 
Subjt:  QINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGI-CVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYG

Query:  YIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSMLINSSL
        ++Y L +KSQ  +    F N +E +   ++    SD  GE+   ++           +   HGI    +   TP+ NG+++R++R ++    ++L ++S+
Subjt:  YIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSMLINSSL

Query:  PVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQVE--VRIYNPHEKKLDSRTTSGFFIGY------------------------
        P + W YA   A YL+NR+P+  +  ++PF+   G  P+   L V+GC     +R YN H  KLD ++    F+GY                        
Subjt:  PVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQVE--VRIYNPHEKKLDSRTTSGFFIGY------------------------

Query:  ------PEKSKGGSLEPRKVEIQEVRVE-------------------------------------------------IPSSITSSQVVVPVVVDAVNN--
              P  +   +L P    +QE R E                                                 + SS +SS    P       N  
Subjt:  ------PEKSKGGSLEPRKVEIQEVRVE-------------------------------------------------IPSSITSSQVVVPVVVDAVNN--

Query:  -PQEQQINVQT-PHNDIVT--NEPVTEEPQEI---------------------------------------ELRRFVRSRRSAISDDYLVYW--------
         P  Q    QT  H+   T  N P  E P ++                                        L + V +   A  + + +          
Subjt:  -PQEQQINVQT-PHNDIVT--NEPVTEEPQEI---------------------------------------ELRRFVRSRRSAISDDYLVYW--------

Query:  ----HESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKR-VGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKE
            +     L+ +++P +  QA+K +   +W +AM  E+ +   N  WDLV  P      VGC+W+F  K +S+G++ RYKARLVAKGY Q+  +DY E
Subjt:  ----HESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKR-VGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKE

Query:  TFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIY
        TFSPV K  S+RI++ +       + Q+DV  AFL G L ++V+M QP GF+ + + + VCKL++++YGLKQA R WY++  + + + GF  ++ D  ++
Subjt:  TFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIY

Query:  LKISGSKFIILVLYVDDILLTTNDFDLLCQT
        +   G   + +++YVDDIL+T ND  LL  T
Subjt:  LKISGSKFIILVLYVDDILLTTNDFDLLCQT

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.8e-7227.92Show/hide
Query:  VPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKL-DTSGYYFKFGNECFSLFKQNNFIG--SGILCDDLYKLKLDNVFAESLLTLHHNVGTKHG
        +P+   G+  L   +   LDL    YVP+I +NLIS+ +L +T+    +F    F +   N  +    G   D+LY+  + +  A S+            
Subjt:  VPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKL-DTSGYYFKFGNECFSLFKQNNFIG--SGILCDDLYKLKLDNVFAESLLTLHHNVGTKHG

Query:  QINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFT-DLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYG
          ++++   WH RLGH S   +  +I N  LP L+ +  L  C DC   K  K   +     SS+ LE I++D+     + S    +Y++ F+D F+RY 
Subjt:  QINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFT-DLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYG

Query:  YIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSMLINSSL
        ++Y L +KSQ  D   IF + VE +   ++  L SD  GE+    D           +L  HGI    +   TP+ NG+++R++R ++ M  ++L ++S+
Subjt:  YIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSMLINSSL

Query:  PVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQVE--VRIYNPHEKKLDSRTTSGFFIGYPEKSK---------GGSLEPRKVE
        P + W YA   A YL+NR+P+  +  ++PF+   G+ P+   L V+GC     +R YN H  KL+ ++    F+GY              G     R V+
Subjt:  PVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQVE--VRIYNPHEKKLDSRTTSGFFIGYPEKSK---------GGSLEPRKVE

Query:  I-----------------QEVRVE--------------------------------------------------IPSSITSSQVVVPVVVDAVNNPQEQQ
                          QE R +                                                  +PSS  SS         + N PQ   
Subjt:  I-----------------QEVRVE--------------------------------------------------IPSSITSSQVVVPVVVDAVNNPQEQQ

Query:  INVQTPH---NDIVTNEPVTEEPQEIELRRFVRSRRSAISDDYL----------------------------------------VYWHES----------
           QT +   N  + N P    P      +     +S IS  ++                                        V  H            
Subjt:  INVQTPH---NDIVTNEPVTEEPQEIELRRFVRSRRSAISDDYL----------------------------------------VYWHES----------

Query:  -------EFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKR-VGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKE
                  L+ +++P +  QA+K D   +W  AM  E+ +   N  WDLV  P  S   VGC+W+F  K +S+G++ RYKARLVAKGY Q+  +DY E
Subjt:  -------EFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKR-VGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKE

Query:  TFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIY
        TFSPV K  S+RI++ +       + Q+DV  AFL G L +EV+M QP GF+ + +   VC+L+++IYGLKQA R WY++    + + GF  +I D  ++
Subjt:  TFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIY

Query:  LKISGSKFIILVLYVDDILLTTNDFDLLCQT
        +   G   I +++YVDDIL+T ND  LL  T
Subjt:  LKISGSKFIILVLYVDDILLTTNDFDLLCQT

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.4e-5148.47Show/hide
Query:  WLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKT
        W  AM +E+ +M     W++   P   K +GCKWV+K K +S+G IERYKARLVAKGYTQ++ ID+ ETFSPV K  S+++I+A+ A Y+  L+Q+D+  
Subjt:  WLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKT

Query:  AFLNGNLDEEVFMDQPEGFMVEGKEHM----VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLTTND
        AFLNG+LDEE++M  P G+     + +    VC LK+SIYGLKQASRQW+LKF+ T+  FGF ++  D   +LKI+ + F+ +++YVDDI++ +N+
Subjt:  AFLNGNLDEEVFMDQPEGFMVEGKEHM----VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLTTND

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-0432.71Show/hide
Query:  NRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKGGSL
        NRT++  VRSML    LP +    A  TA +++N+ PS ++    P E+W    P+  +L  +GC   V   +  E KL  R   G       + KG  L
Subjt:  NRTLMNMVRSMLINSSLPVSLWMYALRTAQYLLNRVPSKSVP-KTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKGGSL

Query:  EPRKVEI
          R V I
Subjt:  EPRKVEI

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.9e-1643.69Show/hide
Query:  SIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKETFSPVSKKDSLR
        +I  +P S   A+K      W  AM+EEL +++ N+ W LV  P     +GCKWVFKTK  S+G ++R KARLVAKG+ Q++ I + ET+SPV +  ++R
Subjt:  SIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKTKRDSNGNIERYKARLVAKGYTQKDDIDYKETFSPVSKKDSLR

Query:  IIM
         I+
Subjt:  IIM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGGATTCCTTACGACCCGAATCACAAACCCAAATGAGAGACTCATTTTTATGGGAAACAGAGTCAAAGTTCCAGTTGAAGCTGTGGGAACCTATCGTTTAACTTT
AGATACTGGACATCATTTAGACCTTTATGGTACCTTTTATGTTCCTTCTATTTCTCGTAATTTGATTTCCTTGTCAAAACTTGATACTTCAGGTTATTACTTTAAATTTG
GGAATGAGTGTTTTAGTTTATTCAAACAGAACAATTTTATTGGTTCTGGTATTCTTTGTGATGACTTATATAAATTAAAGCTTGATAATGTTTTTGCTGAGAGTTTGTTA
ACCTTGCATCATAATGTTGGTACTAAACATGGTCAAATTAATGAATCGTCAGCTTACTTGTGGCATAAACGTTTAGGTCACATATCCAAAGAAAGAATTAAAAGATTAAT
AAAGAATGAAATTCTTCCAGATTTGGATTTTACTGACCTTGGAATTTGTGTGGATTGTATTAAAGGAAAACAAACAAAACACACAGTTAATAAAGAAGCCACAAGAAGCT
CGCAACTCCTTGAAATTATACACACTGATATTTGTGGGCCTTTTGATGTTCCATCCTTTGGTGGAGAAAAGTATTTTATCACCTTTATTGATGATTTCTCACGTTATGGT
TATATCTATTTATTGCATGAGAAATCTCAAGCAATAGATGCCTTAAAAATATTTATAAATGAAGTTGAAAGGCAATTAGATAGAAAGGTGAAAATCTTAAGATCTGATAG
AGTTGGTGAGTATTATGGAAAATATGATGAGAATGGACAATGCCCCGGTCCATTCGCTAAATTCCTAGAAAGTCATGGCATATGTGCTCAATACACAATGCTAGGAACAC
CACAACAAAATGGTGTTGCAAAAAGGCGAAATCGTACATTAATGAATATGGTTAGAAGCATGTTAATTAATTCATCTTTACCTGTGTCCTTGTGGATGTATGCATTAAGA
ACCGCTCAATATTTATTAAACAGGGTTCCTAGTAAGTCAGTTCCAAAGACACCTTTTGAACTGTGGACAGGAAGGAAACCTAGTTTAAGACACCTACATGTTTGGGGTTG
TCAAGTGGAAGTAAGAATTTATAATCCACATGAAAAGAAACTGGATTCAAGAACAACCAGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGTGGGAGTTTGGAAC
CGCGTAAAGTGGAAATTCAAGAAGTTAGGGTGGAAATTCCTTCATCTATAACTTCTTCTCAAGTTGTTGTTCCTGTAGTTGTTGACGCTGTTAACAATCCACAAGAACAA
CAAATTAATGTTCAAACACCACATAATGATATTGTAACAAATGAACCTGTAACTGAGGAACCACAAGAAATAGAATTAAGAAGATTTGTAAGATCAAGAAGATCAGCTAT
TTCTGATGACTATTTGGTTTATTGGCATGAGTCAGAATTTGACTTAAGCATTGATAATGATCCAATTTCGTTTTCACAAGCCATTAAAGGAGATAATTCTACCAAATGGT
TAGATGCCATGAAAGAAGAGTTAAAATCTATGAATGATAATGAATTCTGGGATCTTGTAGAATTTCCTAAAGAAAGTAAAAGAGTTGGGTGTAAATGGGTCTTTAAGACC
AAACGTGACTCAAATGGCAATATTGAACGATACAAGGCTAGACTTGTTGCCAAAGGTTATACTCAGAAAGATGACATTGACTACAAAGAGACTTTTTCTCCTGTCTCGAA
AAAGGACTCATTAAGAATTATTATGGCTTTGGTAGCTCATTATGATTTAGAGCTTTATCAAATGGATGTGAAAACCGCCTTTCTAAATGGAAATTTAGATGAAGAAGTGT
TCATGGATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAACATATGGTGTGTAAATTAAAGAGGTCAATATATGGACTTAAACAAGCTTCGAGACAGTGGTATCTTAAG
TTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAACATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATACGTTGATGA
CATCTTGCTTACTACAAATGACTTTGATTTATTATGTCAAACCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGGATTCCTTACGACCCGAATCACAAACCCAAATGAGAGACTCATTTTTATGGGAAACAGAGTCAAAGTTCCAGTTGAAGCTGTGGGAACCTATCGTTTAACTTT
AGATACTGGACATCATTTAGACCTTTATGGTACCTTTTATGTTCCTTCTATTTCTCGTAATTTGATTTCCTTGTCAAAACTTGATACTTCAGGTTATTACTTTAAATTTG
GGAATGAGTGTTTTAGTTTATTCAAACAGAACAATTTTATTGGTTCTGGTATTCTTTGTGATGACTTATATAAATTAAAGCTTGATAATGTTTTTGCTGAGAGTTTGTTA
ACCTTGCATCATAATGTTGGTACTAAACATGGTCAAATTAATGAATCGTCAGCTTACTTGTGGCATAAACGTTTAGGTCACATATCCAAAGAAAGAATTAAAAGATTAAT
AAAGAATGAAATTCTTCCAGATTTGGATTTTACTGACCTTGGAATTTGTGTGGATTGTATTAAAGGAAAACAAACAAAACACACAGTTAATAAAGAAGCCACAAGAAGCT
CGCAACTCCTTGAAATTATACACACTGATATTTGTGGGCCTTTTGATGTTCCATCCTTTGGTGGAGAAAAGTATTTTATCACCTTTATTGATGATTTCTCACGTTATGGT
TATATCTATTTATTGCATGAGAAATCTCAAGCAATAGATGCCTTAAAAATATTTATAAATGAAGTTGAAAGGCAATTAGATAGAAAGGTGAAAATCTTAAGATCTGATAG
AGTTGGTGAGTATTATGGAAAATATGATGAGAATGGACAATGCCCCGGTCCATTCGCTAAATTCCTAGAAAGTCATGGCATATGTGCTCAATACACAATGCTAGGAACAC
CACAACAAAATGGTGTTGCAAAAAGGCGAAATCGTACATTAATGAATATGGTTAGAAGCATGTTAATTAATTCATCTTTACCTGTGTCCTTGTGGATGTATGCATTAAGA
ACCGCTCAATATTTATTAAACAGGGTTCCTAGTAAGTCAGTTCCAAAGACACCTTTTGAACTGTGGACAGGAAGGAAACCTAGTTTAAGACACCTACATGTTTGGGGTTG
TCAAGTGGAAGTAAGAATTTATAATCCACATGAAAAGAAACTGGATTCAAGAACAACCAGTGGTTTCTTCATTGGTTATCCAGAAAAATCAAAAGGTGGGAGTTTGGAAC
CGCGTAAAGTGGAAATTCAAGAAGTTAGGGTGGAAATTCCTTCATCTATAACTTCTTCTCAAGTTGTTGTTCCTGTAGTTGTTGACGCTGTTAACAATCCACAAGAACAA
CAAATTAATGTTCAAACACCACATAATGATATTGTAACAAATGAACCTGTAACTGAGGAACCACAAGAAATAGAATTAAGAAGATTTGTAAGATCAAGAAGATCAGCTAT
TTCTGATGACTATTTGGTTTATTGGCATGAGTCAGAATTTGACTTAAGCATTGATAATGATCCAATTTCGTTTTCACAAGCCATTAAAGGAGATAATTCTACCAAATGGT
TAGATGCCATGAAAGAAGAGTTAAAATCTATGAATGATAATGAATTCTGGGATCTTGTAGAATTTCCTAAAGAAAGTAAAAGAGTTGGGTGTAAATGGGTCTTTAAGACC
AAACGTGACTCAAATGGCAATATTGAACGATACAAGGCTAGACTTGTTGCCAAAGGTTATACTCAGAAAGATGACATTGACTACAAAGAGACTTTTTCTCCTGTCTCGAA
AAAGGACTCATTAAGAATTATTATGGCTTTGGTAGCTCATTATGATTTAGAGCTTTATCAAATGGATGTGAAAACCGCCTTTCTAAATGGAAATTTAGATGAAGAAGTGT
TCATGGATCAACCAGAAGGTTTTATGGTTGAAGGAAAGGAACATATGGTGTGTAAATTAAAGAGGTCAATATATGGACTTAAACAAGCTTCGAGACAGTGGTATCTTAAG
TTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAACATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATACGTTGATGA
CATCTTGCTTACTACAAATGACTTTGATTTATTATGTCAAACCAAATAA
Protein sequenceShow/hide protein sequence
MQGFLTTRITNPNERLIFMGNRVKVPVEAVGTYRLTLDTGHHLDLYGTFYVPSISRNLISLSKLDTSGYYFKFGNECFSLFKQNNFIGSGILCDDLYKLKLDNVFAESLL
TLHHNVGTKHGQINESSAYLWHKRLGHISKERIKRLIKNEILPDLDFTDLGICVDCIKGKQTKHTVNKEATRSSQLLEIIHTDICGPFDVPSFGGEKYFITFIDDFSRYG
YIYLLHEKSQAIDALKIFINEVERQLDRKVKILRSDRVGEYYGKYDENGQCPGPFAKFLESHGICAQYTMLGTPQQNGVAKRRNRTLMNMVRSMLINSSLPVSLWMYALR
TAQYLLNRVPSKSVPKTPFELWTGRKPSLRHLHVWGCQVEVRIYNPHEKKLDSRTTSGFFIGYPEKSKGGSLEPRKVEIQEVRVEIPSSITSSQVVVPVVVDAVNNPQEQ
QINVQTPHNDIVTNEPVTEEPQEIELRRFVRSRRSAISDDYLVYWHESEFDLSIDNDPISFSQAIKGDNSTKWLDAMKEELKSMNDNEFWDLVEFPKESKRVGCKWVFKT
KRDSNGNIERYKARLVAKGYTQKDDIDYKETFSPVSKKDSLRIIMALVAHYDLELYQMDVKTAFLNGNLDEEVFMDQPEGFMVEGKEHMVCKLKRSIYGLKQASRQWYLK
FNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLTTNDFDLLCQTK