; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0073601 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0073601
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr03:21137678..21138748
RNA-Seq ExpressionCmc03g0073601
SyntenyCmc03g0073601
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR021109 - Aspartic peptidase domain superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

KAA0063412.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase3.1e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

A0A5D3B7E7 Reverse transcriptase3.1e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

A0A5D3BR73 Reverse transcriptase3.1e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

A0A5D3BRZ6 Reverse transcriptase3.1e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

A0A5D3C4R1 Reverse transcriptase3.1e-20198.88Show/hide
Query:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
        MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV
Subjt:  MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSV

Query:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA
        VQTDLRQPDGLKMISAMQLKKGLSRDEPTF+AIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPG KPPAKNAYRMAPPELA
Subjt:  VQTDLRQPDGLKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELA

Query:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY
        ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTV NKYPLPIITDLFDRLHGAKYFSKL+LRSGYYQVRIAEGDEPKTTCVTRY
Subjt:  ELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRY

Query:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
        GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Subjt:  GAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein4.4e-3535.07Show/hide
Query:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL
        E+  + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL

Query:  NKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KL+L+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E  +  VV Y+DDI+++
Subjt:  NKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHL
        S +  EH  H+
Subjt:  STTMEEHRDHL

P0CT41 Transposon Tf2-12 polyprotein4.4e-3535.07Show/hide
Query:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL
        E+  + ++++D+  ++  + LP P + ++ E+EL     + P +N Y + P ++  +  ++++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ L
Subjt:  EIMRVLEKYRDVMPDSLPKSLP-PRRMIDHEIELV-PGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRAL

Query:  NKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY
        NK    N YPLP+I  L  ++ G+  F+KL+L+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N +  E  +  VV Y+DDI+++
Subjt:  NKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVY

Query:  STTMEEHRDHL
        S +  EH  H+
Subjt:  STTMEEHRDHL

P31843 RNA-directed DNA polymerase homolog1.1e-4672Show/hide
Query:  SLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKF
        SLR+CIDYRAL K+T+ NKYP+P + DLFDRL  A +F+KL+LRSGY+QVRIA+GDEPKTTCVTRYG+FEF VMPFGLTNA ATFC LMN V +EYLD F
Subjt:  SLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKF

Query:  VVVYLDDIVV---YSTTMEEHRDHL
        VVVYLDD+VV   YS ++ EH  HL
Subjt:  VVVYLDDIVV---YSTTMEEHRDHL

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein5.3e-4141.15Show/hide
Query:  EKYRDVMPDSLP------KSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNK
        +KYR+++ + LP       ++P    + H+IE+ PG + P    Y +      E+ K + +LL+  FI P+K+P  +PV+   KKDG+ RLC+DYR LNK
Subjt:  EKYRDVMPDSLP------KSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNK

Query:  LTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYST
         T+ + +PLP I +L  R+  A+ F+ L+L SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+TF   M   F +   +FV VYLDDI+++S 
Subjt:  LTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYST

Query:  TMEEHRDHL
        + EEH  HL
Subjt:  TMEEHRDHL

Q99315 Transposon Ty3-G Gag-Pol polyprotein5.3e-4141.15Show/hide
Query:  EKYRDVMPDSLP------KSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNK
        +KYR+++ + LP       ++P    + H+IE+ PG + P    Y +      E+ K + +LL+  FI P+K+P  +PV+   KKDG+ RLC+DYR LNK
Subjt:  EKYRDVMPDSLP------KSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKKDGSLRLCIDYRALNK

Query:  LTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYST
         T+ + +PLP I +L  R+  A+ F+ L+L SGY+Q+ +   D  KT  VT  G +E+ VMPFGL NAP+TF   M   F +   +FV VYLDDI+++S 
Subjt:  LTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYST

Query:  TMEEHRDHL
        + EEH  HL
Subjt:  TMEEHRDHL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACTCTGGTGCCACCCACAATTTCATAACAGAAGTAGAAGCTAAACGTTTGAATCTCCGCTGGGAAAAGGATGCTGGAAGAATGAAAGCCGTGAATTCTGCTGC
CCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTGGTACTGGGAA
TGGAGTTCCTACTTGAACATCAGGTAATCCCAATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTAGTACAGACTGACCTACGTCAACCAGATGGA
TTGAAAATGATCTCGGCCATGCAATTAAAGAAGGGTCTCTCTCGAGACGAACCAACATTTATAGCCATCCCACTCAAATCGTCAGAGAACTCAGGGGAGACAGTCCCTAA
GGAGATCATGCGCGTGCTAGAGAAATACCGTGATGTGATGCCCGATAGTTTACCCAAGTCCTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTAGTGCCAGGGG
TAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAACTACTGAATGCAGGGTTTATCAGGCCTGCAAAAGCT
CCGTATGGGGCCCCAGTTCTTTTCCAAAGGAAGAAAGATGGGAGTTTACGACTGTGCATTGATTATCGTGCCCTAAATAAGCTCACAGTCTGTAACAAGTATCCACTTCC
CATAATTACTGACTTGTTCGACCGCTTACATGGGGCAAAGTATTTTTCAAAGTTAAACTTGCGGTCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAACCGAAGA
CAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGCACGTTGATGAACCAGGTCTTCCACGAATAT
CTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACTCTGGTGCCACCCACAATTTCATAACAGAAGTAGAAGCTAAACGTTTGAATCTCCGCTGGGAAAAGGATGCTGGAAGAATGAAAGCCGTGAATTCTGCTGC
CCTACCTATCATCGGACTAGTGAAACGAACGATGATAAGATTGGGAGGATGGAGTGGCCTCGTAGACTTTGTAGTAGTAAAAATGGATGACTTTGATGTGGTACTGGGAA
TGGAGTTCCTACTTGAACATCAGGTAATCCCAATGCCTTTGGCCAAATGCTTGGTGATCACTGGACCTACACCCTCGGTAGTACAGACTGACCTACGTCAACCAGATGGA
TTGAAAATGATCTCGGCCATGCAATTAAAGAAGGGTCTCTCTCGAGACGAACCAACATTTATAGCCATCCCACTCAAATCGTCAGAGAACTCAGGGGAGACAGTCCCTAA
GGAGATCATGCGCGTGCTAGAGAAATACCGTGATGTGATGCCCGATAGTTTACCCAAGTCCTTGCCACCTCGGAGAATGATTGATCATGAGATCGAGTTAGTGCCAGGGG
TAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAACTACTGAATGCAGGGTTTATCAGGCCTGCAAAAGCT
CCGTATGGGGCCCCAGTTCTTTTCCAAAGGAAGAAAGATGGGAGTTTACGACTGTGCATTGATTATCGTGCCCTAAATAAGCTCACAGTCTGTAACAAGTATCCACTTCC
CATAATTACTGACTTGTTCGACCGCTTACATGGGGCAAAGTATTTTTCAAAGTTAAACTTGCGGTCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAACCGAAGA
CAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTCTGCACGTTGATGAACCAGGTCTTCCACGAATAT
CTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTATAA
Protein sequenceShow/hide protein sequence
MVDSGATHNFITEVEAKRLNLRWEKDAGRMKAVNSAALPIIGLVKRTMIRLGGWSGLVDFVVVKMDDFDVVLGMEFLLEHQVIPMPLAKCLVITGPTPSVVQTDLRQPDG
LKMISAMQLKKGLSRDEPTFIAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRRMIDHEIELVPGVKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKA
PYGAPVLFQRKKDGSLRLCIDYRALNKLTVCNKYPLPIITDLFDRLHGAKYFSKLNLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEY
LDKFVVVYLDDIVVYSTTMEEHRDHL