| GenBank top hits | e value | %identity | Alignment |
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| KAA0032794.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.5e-70 | 92.57 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPLPRID+LFDQLQGAT+FSKIDLRSGYHQLRIKD DVPKT FRSRY HYEFIVMSFGLTNAP VFMDLMNRVFREFL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTT
IVFIDDILIYSKTEA+HEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT+
Subjt: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTT
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| KAA0036553.1 pol protein [Cucumis melo var. makuwa] | 1.4e-68 | 91.84 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPLP ID+LFDQLQ AT+FSKIDLRSGYHQLRIKD DVPKT FRSRY HYEFIVMSFGLTNAPAVFMDLMNRVFREFL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
IVFIDDILIYSKTEA+HEEHLR+VSFLGHVVSKAGVSVDPAKIEAVT
Subjt: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
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| KAA0040699.1 pol protein [Cucumis melo var. makuwa] | 6.9e-71 | 93.88 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPLPRID+LFDQLQGAT+FSKIDLRSGYHQLRIKD DVPKT FRSRY HYEFIVMSFGLTNAPAVFMDLMNRVFREFL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
IVFIDDILIYSKTEA+HEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
Subjt: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
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| KAA0051368.1 pol protein [Cucumis melo var. makuwa] | 2.9e-69 | 91.84 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPLPRID+LFDQLQGA +FSK DLRSGYHQLRIKD DVPKT FRSRY HYEFIVMSFGLTNAPAVFMDLMNRVFR+FL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
IVFIDDILIYSKTEA+HEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
Subjt: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
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| TYK18897.1 pol protein [Cucumis melo var. makuwa] | 2.5e-68 | 91.28 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPL RID+LFDQLQGAT+FSKIDLRSGYHQLRIKDSDVPKT FRSRY HYEFIVMSFGLTNAP VFMDLMNRVF+EFL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRM-VSFLGHVVSKAGVSVDPAKIEAVTT
IVFIDDILIYSKTEA+HEEHLRM VSFLGHVVSKAGVSVDPAKIEAVT+
Subjt: IVFIDDILIYSKTEAKHEEHLRM-VSFLGHVVSKAGVSVDPAKIEAVTT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T0Y9 Reverse transcriptase | 7.0e-69 | 91.84 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPLP ID+LFDQLQ AT+FSKIDLRSGYHQLRIKD DVPKT FRSRY HYEFIVMSFGLTNAPAVFMDLMNRVFREFL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
IVFIDDILIYSKTEA+HEEHLR+VSFLGHVVSKAGVSVDPAKIEAVT
Subjt: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
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| A0A5A7THF3 Reverse transcriptase | 3.3e-71 | 93.88 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPLPRID+LFDQLQGAT+FSKIDLRSGYHQLRIKD DVPKT FRSRY HYEFIVMSFGLTNAPAVFMDLMNRVFREFL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
IVFIDDILIYSKTEA+HEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
Subjt: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
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| A0A5A7U7V9 Reverse transcriptase | 1.4e-69 | 91.84 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPLPRID+LFDQLQGA +FSK DLRSGYHQLRIKD DVPKT FRSRY HYEFIVMSFGLTNAPAVFMDLMNRVFR+FL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
IVFIDDILIYSKTEA+HEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
Subjt: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT
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| A0A5D3D5R4 Pol protein | 1.2e-68 | 91.28 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPL RID+LFDQLQGAT+FSKIDLRSGYHQLRIKDSDVPKT FRSRY HYEFIVMSFGLTNAP VFMDLMNRVF+EFL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRM-VSFLGHVVSKAGVSVDPAKIEAVTT
IVFIDDILIYSKTEA+HEEHLRM VSFLGHVVSKAGVSVDPAKIEAVT+
Subjt: IVFIDDILIYSKTEAKHEEHLRM-VSFLGHVVSKAGVSVDPAKIEAVTT
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| A0A5D3E456 Reverse transcriptase | 7.4e-71 | 92.57 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
M LCIDYRELNKVTVKN YPLPRID+LFDQLQGAT+FSKIDLRSGYHQLRIKD DVPKT FRSRY HYEFIVMSFGLTNAP VFMDLMNRVFREFL TFV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTT
IVFIDDILIYSKTEA+HEEHLRMVSFLGHVVSKAGVSVDPAKIEAVT+
Subjt: IVFIDDILIYSKTEAKHEEHLRMVSFLGHVVSKAGVSVDPAKIEAVTT
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 9.2e-26 | 34.73 | Show/hide |
Query: LCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFVIV
+ IDYR+LN++TV + +P+P +D + +L F+ IDL G+HQ+ + V KT F +++ HYE++ M FGL NAPA F MN + R L +V
Subjt: LCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFVIV
Query: FIDDILIYSKTEAKHEEHLRMV-----------------------SFLGHVVSKAGVSVDPAKIEAV
++DDI+++S + +H + L +V +FLGHV++ G+ +P KIEA+
Subjt: FIDDILIYSKTEAKHEEHLRMV-----------------------SFLGHVVSKAGVSVDPAKIEAV
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| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 4.1e-26 | 32.93 | Show/hide |
Query: IDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFVIVFI
IDYR+LN++T+ + YP+P +D + +L F+ IDL G+HQ+ + + + KT F ++ HYE++ M FGL NAPA F MN + R L +V++
Subjt: IDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFVIVFI
Query: DDILIYSKTEAKHEEHLRMV-----------------------SFLGHVVSKAGVSVDPAKIEAVTT
DDI+I+S + +H +++V +FLGH+V+ G+ +P K++A+ +
Subjt: DDILIYSKTEAKHEEHLRMV-----------------------SFLGHVVSKAGVSVDPAKIEAVTT
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| P31843 RNA-directed DNA polymerase homolog | 9.2e-34 | 55.91 | Show/hide |
Query: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
+ +CIDYR L KVT+KN YP+PR+D+LFD+L AT F+K+DLRSGY Q+RI D PKTT +RY +EF VM FGLTNA A F +LMN V E+L FV
Subjt: MHLCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFV
Query: IVFIDDIL---IYSKTEAKHEEHLRMV
+V++DD++ IYS + +H +HLR+V
Subjt: IVFIDDIL---IYSKTEAKHEEHLRMV
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 4.9e-27 | 34.52 | Show/hide |
Query: LCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFVIV
+ +D++ LN VT+ + YP+P I+ L A F+ +DL SG+HQ+ +K+SD+PKT F + YEF+ + FGL NAPA+F +++ + RE +G V
Subjt: LCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFVIV
Query: FIDDILIYSKTEAKHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIEAVT
+IDDI+++S+ H ++LR+ V FLG++V+ G+ DP K+ A++
Subjt: FIDDILIYSKTEAKHEEHLRM-----------------------VSFLGHVVSKAGVSVDPAKIEAVT
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 4.6e-25 | 46.72 | Show/hide |
Query: LCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFVIV
LC+DYR LNK T+ + +PLPRIDNL ++ A +F+ +DL SGYHQ+ ++ D KT F + YE+ VM FGL NAP+ F M FR+ FV V
Subjt: LCIDYRELNKVTVKNIYPLPRIDNLFDQLQGATMFSKIDLRSGYHQLRIKDSDVPKTTFRSRYEHYEFIVMSFGLTNAPAVFMDLMNRVFREFLGTFVIV
Query: FIDDILIYSKTEAKHEEHLRMV
++DDILI+S++ +H +HL V
Subjt: FIDDILIYSKTEAKHEEHLRMV
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