| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026271.1 pol protein [Cucumis melo var. makuwa] | 5.2e-196 | 84.78 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQ+LLDKGFIRSSVSPWGAPVLFVKKKDG M LCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS YHQLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLR+VL+T R NKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
VSVDP KIEAVT W+RPS VSE+ L + ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK L
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
Query: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
GCVLMQQG VVAYASRQLKSHEQN+PTHDLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADA
Subjt: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
Query: LSRKVSHLVAHITR
LSRKVSH A ITR
Subjt: LSRKVSHLVAHITR
|
|
| KAA0035602.1 pol protein [Cucumis melo var. makuwa] | 8.9e-196 | 88.52 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQELLDKGFIR SVSPWGAPVLFVKKKDG MHLCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS Y QLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTE EHEEHLR+VL+T R NKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLLVDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDLGCVLMQQGNVVAYASRQLKSHE
VSVDP KIEAVT W+RPS VSEL ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK LGCVLMQQG VVAYASRQLKSHE
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLLVDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDLGCVLMQQGNVVAYASRQLKSHE
Query: QNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADALSRKVSHLVAHITR
QN+PT DLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSH A ITR
Subjt: QNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADALSRKVSHLVAHITR
|
|
| KAA0037244.1 reverse transcriptase [Cucumis melo var. makuwa] | 4.0e-196 | 85.02 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQELLDKGFIR SVSPWGAPVLFVKKKDG M LCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS YHQLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVL+T R NKLYAKF KCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
VSVDP KIEAVT W+RPS VSE+ L + ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK L
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
Query: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
GCVLMQQG VVAYASRQLKSHEQN+PTHDLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADA
Subjt: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
Query: LSRKVSHLVAHITR
LSRKVSH A ITR
Subjt: LSRKVSHLVAHITR
|
|
| KAA0047209.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.4e-196 | 88.78 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQELLDKGFIRSSVSPWGAPVLFVKKKDG M LCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS YHQLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAF SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT+ EHE+HLR+VL+T R NKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLLVDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDLGCVLMQQGNVVAYASRQLKSHE
VSVDP KIE VT W+RPS VSEL ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK LGCVLMQQG VVAYASRQLKSHE
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLLVDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDLGCVLMQQGNVVAYASRQLKSHE
Query: QNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADALSRKVSHLVAHITR
QN+PTHDLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSH A ITR
Subjt: QNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADALSRKVSHLVAHITR
|
|
| KAA0048687.1 pol protein [Cucumis melo var. makuwa] | 2.4e-196 | 85.02 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQELLDKGFIR SVSPWGAPVLFVKKKDG M LCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS YHQLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVL+T R NKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
VSVDP KIEAVT W+RPS VSE+ L + ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK L
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
Query: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
GCVLMQQG VVAYASRQLKSHEQN+PTHDLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADA
Subjt: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
Query: LSRKVSHLVAHITR
LSRKVSH A ITR
Subjt: LSRKVSHLVAHITR
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SPZ2 Pol protein | 2.5e-196 | 84.78 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQ+LLDKGFIRSSVSPWGAPVLFVKKKDG M LCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS YHQLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLR+VL+T R NKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
VSVDP KIEAVT W+RPS VSE+ L + ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK L
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
Query: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
GCVLMQQG VVAYASRQLKSHEQN+PTHDLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADA
Subjt: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
Query: LSRKVSHLVAHITR
LSRKVSH A ITR
Subjt: LSRKVSHLVAHITR
|
|
| A0A5A7SWF6 Reverse transcriptase | 4.3e-196 | 88.52 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQELLDKGFIR SVSPWGAPVLFVKKKDG MHLCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS Y QLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDD+LIYSKTE EHEEHLR+VL+T R NKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLLVDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDLGCVLMQQGNVVAYASRQLKSHE
VSVDP KIEAVT W+RPS VSEL ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK LGCVLMQQG VVAYASRQLKSHE
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLLVDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDLGCVLMQQGNVVAYASRQLKSHE
Query: QNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADALSRKVSHLVAHITR
QN+PT DLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSH A ITR
Subjt: QNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADALSRKVSHLVAHITR
|
|
| A0A5A7T190 Reverse transcriptase | 1.9e-196 | 85.02 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQELLDKGFIR SVSPWGAPVLFVKKKDG M LCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS YHQLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVL+T R NKLYAKF KCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
VSVDP KIEAVT W+RPS VSE+ L + ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK L
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
Query: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
GCVLMQQG VVAYASRQLKSHEQN+PTHDLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADA
Subjt: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
Query: LSRKVSHLVAHITR
LSRKVSH A ITR
Subjt: LSRKVSHLVAHITR
|
|
| A0A5A7U149 Reverse transcriptase | 1.1e-196 | 88.78 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQELLDKGFIRSSVSPWGAPVLFVKKKDG M LCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS YHQLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAF SRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKT+ EHE+HLR+VL+T R NKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLLVDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDLGCVLMQQGNVVAYASRQLKSHE
VSVDP KIE VT W+RPS VSEL ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK LGCVLMQQG VVAYASRQLKSHE
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLLVDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDLGCVLMQQGNVVAYASRQLKSHE
Query: QNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADALSRKVSHLVAHITR
QN+PTHDLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADALSRKVSH A ITR
Subjt: QNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADALSRKVSHLVAHITR
|
|
| A0A5A7U330 Reverse transcriptase | 1.1e-196 | 85.02 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
MAPAELKELK+QLQELLDKGFIR SVSPWGAPVLFVKKKDG M LCIDYRELNKVTVKN+YPLPRI+DLFDQLQGATVFSKIDLRS YHQLRIKD DVPK
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTE EHEEHLRMVL+T R NKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
VSVDP KIEAVT W+RPS VSE+ L + ++G FVW KACE+SFQNLKQKLVTAPVLTVPDGSGSFVIYSD SKK L
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
Query: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
GCVLMQQG VVAYASRQLKSHEQN+PTHDLEL VVF LKIWRHYLYGEKIQIFTDHKSLKYFFTQKEL MRQRRWLELVKDYDCEILYHP KANVVADA
Subjt: GCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKANVVADA
Query: LSRKVSHLVAHITR
LSRKVSH A ITR
Subjt: LSRKVSHLVAHITR
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 5.3e-66 | 33.25 | Show/hide |
Query: KELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGL-----MHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPKT
+E++ Q+Q++L++G IR+S SP+ +P+ V KK + IDYR+LN++TV +++P+P ++++ +L F+ IDL +HQ+ + V KT
Subjt: KELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGL-----MHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPKT
Query: AFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAGV
AF +++GHYE++ M FGL NAPA F MN + R L+ +V++DDI+++S + EH + L +V E L + KCEF ++ +FLGHV++ G+
Subjt: AFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAGV
Query: SVDPTKIEAVTSWSRPSPVSELLLLL-----------------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSD
+P KIEA+ + P+ E+ L +D + + +F+ LK + P+L VPD + F + +D
Subjt: SVDPTKIEAVTSWSRPSPVSELLLLL-----------------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSD
Query: TSKKDLGCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKA
S LG VL Q G+ ++Y SR L HE N+ T + EL +V+ K +RHYL G +I +DH+ L + + K+ + RW + ++D +I Y K
Subjt: TSKKDLGCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKA
Query: NVVADALSR
N VADALSR
Subjt: NVVADALSR
|
|
| P0CT34 Transposon Tf2-1 polyprotein | 7.9e-62 | 33.33 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
+ P +++ + ++ + L G IR S + PV+FV KK+G + + +DY+ LNK N YPLP I L ++QG+T+F+K+DL+S YH +R++ D K
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
AFR G +E++VM +G++ APA F +N + E ++ V+ ++DDILI+SK+E EH +H++ VL+ + L +KCEF QV F+G+ +S+ G
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
+ I+ V W +P EL L + ++ + W ++ +N+KQ LV+ PVL D S ++ +D S +
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
Query: GCVLMQQGN-----VVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYG--EKIQIFTDHKSLKYFFTQKELIMRQR--RWLELVKDYDCEILYHP
G VL Q+ + V Y S ++ + N+ D E+ ++ LK WRHYL E +I TDH++L T + +R RW ++D++ EI Y P
Subjt: GCVLMQQGN-----VVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYG--EKIQIFTDHKSLKYFFTQKELIMRQR--RWLELVKDYDCEILYHP
Query: RKANVVADALSRKV
AN +ADALSR V
Subjt: RKANVVADALSRKV
|
|
| P0CT41 Transposon Tf2-12 polyprotein | 7.9e-62 | 33.33 | Show/hide |
Query: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
+ P +++ + ++ + L G IR S + PV+FV KK+G + + +DY+ LNK N YPLP I L ++QG+T+F+K+DL+S YH +R++ D K
Subjt: MAPAELKELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKDGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPK
Query: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
AFR G +E++VM +G++ APA F +N + E ++ V+ ++DDILI+SK+E EH +H++ VL+ + L +KCEF QV F+G+ +S+ G
Subjt: TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAG
Query: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
+ I+ V W +P EL L + ++ + W ++ +N+KQ LV+ PVL D S ++ +D S +
Subjt: VSVDPTKIEAVTSWSRPSPVSELLLLL----------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKDL
Query: GCVLMQQGN-----VVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYG--EKIQIFTDHKSLKYFFTQKELIMRQR--RWLELVKDYDCEILYHP
G VL Q+ + V Y S ++ + N+ D E+ ++ LK WRHYL E +I TDH++L T + +R RW ++D++ EI Y P
Subjt: GCVLMQQGN-----VVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYG--EKIQIFTDHKSLKYFFTQKELIMRQR--RWLELVKDYDCEILYHP
Query: RKANVVADALSRKV
AN +ADALSR V
Subjt: RKANVVADALSRKV
|
|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 6.9e-66 | 33.09 | Show/hide |
Query: ELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKD-----GLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPKTA
E++ Q+QE+L++G IR S SP+ +P V KK + IDYR+LN++T+ ++YP+P ++++ +L F+ IDL +HQ+ + + + KTA
Subjt: ELKMQLQELLDKGFIRSSVSPWGAPVLFVKKKD-----GLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPKTA
Query: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
F ++ GHYE++ M FGL NAPA F MN + R L+ +V++DDI+I+S + EH +++V L + KCEF K+ +FLGH+V+ G+
Subjt: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
Query: VDPTKIEAVTSWSRPSPVSELLLLL-----------------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDT
+P K++A+ S+ P+ E+ L +D + ++ E+F+ LK ++ P+L +PD FV+ +D
Subjt: VDPTKIEAVTSWSRPSPVSELLLLL-----------------------------VDQEGTSFVWIKACEESFQNLKQKLVTAPVLTVPDGSGSFVIYSDT
Query: SKKDLGCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKAN
S LG VL Q G+ +++ SR L HE N+ + EL +V+ K +RHYL G + I +DH+ L++ KE + RW + +Y +I Y K N
Subjt: SKKDLGCVLMQQGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGEKIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCEILYHPRKAN
Query: VVADALSR
VADALSR
Subjt: VVADALSR
|
|
| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 7.1e-63 | 33.57 | Show/hide |
Query: ELKMQLQELLDKGFIRSSVSPWGAPVLFVKKK-----DGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPKTA
E++ Q+ ELL G IR S SP+ +P+ V KK + + +D++ LN VT+ + YP+P IN L A F+ +DL S +HQ+ +K+SD+PKTA
Subjt: ELKMQLQELLDKGFIRSSVSPWGAPVLFVKKK-----DGLMHLCIDYRELNKVTVKNKYPLPRINDLFDQLQGATVFSKIDLRSRYHQLRIKDSDVPKTA
Query: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
F + G YEF+ + FGL NAPA+F +++ + RE + V+IDDI+++S+ H ++LR+VL + L K F QV FLG++V+ G+
Subjt: FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVLETHRANKLYAKFSKCEFWLKQVSFLGHVVSKAGVS
Query: VDPTKIEAVTSWSRPSPVSELLLLL------------------------------VDQEGTSFVWIKACE---ESFQNLKQKLVTAPVLTVPDGSGSFVI
DP K+ A++ P+ V EL L + +S V I E +SF +LK L ++ +L P + F +
Subjt: VDPTKIEAVTSWSRPSPVSELLLLL------------------------------VDQEGTSFVWIKACE---ESFQNLKQKLVTAPVLTVPDGSGSFVI
Query: YSDTSKKDLGCVLMQ----QGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCE
+D S +G VL Q + +AY SR L E+N+ T + E+ +++ L R YLYG I+++TDH+ L + + + +RW +++Y+CE
Subjt: YSDTSKKDLGCVLMQ----QGNVVAYASRQLKSHEQNFPTHDLELTVVVFELKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELIMRQRRWLELVKDYDCE
Query: ILYHPRKANVVADALSR
++Y P K+NVVADALSR
Subjt: ILYHPRKANVVADALSR
|
|
