; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0074831 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0074831
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr03:22263755..22264288
RNA-Seq ExpressionCmc03g0074831
SyntenyCmc03g0074831
Gene Ontology termsGO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000502 - proteasome complex (cellular component)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025848.1 pol protein [Cucumis melo var. makuwa]2.1e-9195.48Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IELE G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

KAA0031437.1 pol protein [Cucumis melo var. makuwa]2.1e-9195.48Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IELE G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

KAA0033825.1 pol protein [Cucumis melo var. makuwa]2.1e-9195.48Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IELE G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

KAA0066101.1 reverse transcriptase [Cucumis melo var. makuwa]1.2e-9196.05Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDEL GLPPPREI F+IELE G APISRAPYRMAPAELKE KVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

TYK01306.1 pol protein [Cucumis melo var. makuwa]9.3e-9296.05Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IELE G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

TrEMBL top hitse value%identityAlignment
A0A5A7TEQ2 Reverse transcriptase1.0e-9195.48Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IELE G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

A0A5A7UBS1 Reverse transcriptase1.0e-9195.48Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IELE G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

A0A5A7VK60 Reverse transcriptase5.9e-9296.05Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDEL GLPPPREI F+IELE G APISRAPYRMAPAELKE KVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

A0A5D3BSV9 Reverse transcriptase4.5e-9296.05Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IELE G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

A0A5D3CQB5 Reverse transcriptase1.0e-9195.48Show/hide
Query:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
        MKASKLL+QGTWGILASVVD REPEVSLSSEPVVREYPDVFPDEL GLPPPRE+DF+IELE G APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Subjt:  MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFR
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.1e-2234.81Show/hide
Query:  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR
Subjt:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

P0CT41 Transposon Tf2-12 polyprotein2.1e-2234.81Show/hide
Query:  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR
Subjt:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein8.3e-2735.6Show/hide
Query:  KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELLGLPPPREIDFS-------IELESGIAPISRAPYRMAPAELKELKVQ
        +AS L   G +  + S + + EP  +  S           + ++Y ++  ++L    PPR  D +       IE++ G       PY +     +E+   
Subjt:  KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELLGLPPPREIDFS-------IELESGIAPISRAPYRMAPAELKELKVQ

Query:  LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF
        +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF
Subjt:  LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF

Q99315 Transposon Ty3-G Gag-Pol polyprotein8.3e-2735.6Show/hide
Query:  KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELLGLPPPREIDFS-------IELESGIAPISRAPYRMAPAELKELKVQ
        +AS L   G +  + S + + EP  +  S           + ++Y ++  ++L    PPR  D +       IE++ G       PY +     +E+   
Subjt:  KASKLLNQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDELLGLPPPREIDFS-------IELESGIAPISRAPYRMAPAELKELKVQ

Query:  LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF
        +Q+LLD  FI PS SP  +PV+ V KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF
Subjt:  LQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF

Q9UR07 Transposon Tf2-11 polyprotein2.1e-2234.81Show/hide
Query:  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+  +     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSEPVVREYPDVFPD-ELLGLPPP-REIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR
        +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR
Subjt:  IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCTGAACCAGTGGTAAGGGAGTA
CCCTGATGTCTTCCCCGATGAGCTTCTAGGACTTCCGCCTCCTAGAGAGATAGACTTCTCCATTGAATTAGAATCAGGCATTGCTCCTATCTCGAGAGCCCCTTACAGAA
TGGCTCCAGCCGAGCTAAAAGAGCTGAAGGTCCAATTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGGGCCCCAGTGTTGTTTGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGCTGCA
GGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGGATCAGGGACAGTGACATTCCCAAGACGGCCTTTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTAGTAAATTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTGGTAGATACCCGAGAACCAGAAGTTTCCCTATCTTCTGAACCAGTGGTAAGGGAGTA
CCCTGATGTCTTCCCCGATGAGCTTCTAGGACTTCCGCCTCCTAGAGAGATAGACTTCTCCATTGAATTAGAATCAGGCATTGCTCCTATCTCGAGAGCCCCTTACAGAA
TGGCTCCAGCCGAGCTAAAAGAGCTGAAGGTCCAATTGCAGGAGTTGCTGGACAAGGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGGGCCCCAGTGTTGTTTGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGCTGCA
GGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGGATCAGGGACAGTGACATTCCCAAGACGGCCTTTCGTTAG
Protein sequenceShow/hide protein sequence
MKASKLLNQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELLGLPPPREIDFSIELESGIAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK
KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR