; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0075181 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0075181
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationCMiso1.1chr03:22605817..22610471
RNA-Seq ExpressionCmc03g0075181
SyntenyCmc03g0075181
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150370.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus]2.1e-8690.5Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MA+KDE+RIFVGGLSWNISE QLENAF RFGK+LETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQEL E IISVNKAEPKME DDTE GFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GRASFGRGKD+SV QDECFKCGRPGHWARD PSV G RGGGRGSFSSRS+FDSDGRGDRFGGDRDRYVD+RYNGG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

XP_022133790.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]1.1e-8287.15Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MA KDE+RIFVGGLSWNISE QLENAF+R+GKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG+EL E  ISVNKAEPKME DD EPGFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GR SFGRG D+SV QDECFKCGRPGHWARD PSV G RG GRGSFSSRS+FDSD RGDRFGGDRDRYVDDRY+GG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

XP_022990423.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima]3.1e-8285.47Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MAAKDE+RIFVGGLSWN+SE +LENAF+R+GKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E  E IISVNKAEPKME DD EPGFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GRASFGRG D+SV QDECFKCGRPGHWARD PS  G RG GRGSFSSRS+FD D RGDRFGGDRDRYVDDRY+GG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

XP_023544240.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo]3.1e-8285.47Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MAAKDE+RIFVGGLSWN+SE +LENAF+R+GKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E  E IISVNKAEPKME DD EPGFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GRASFGRG D+SV QDECFKCGRPGHWARD PS  G RG GRGSFSSRS+FD D RGDRFGGDRDRYVDDRY+GG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

XP_038885252.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Benincasa hispida]2.3e-8591.06Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MAAKDE+RIFVGGLSWNISE QLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQE  E IISVNKAEPKME DD EPGFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GRASFGRG D+SV QDECFKCGRPGHWARD PSVSG RG GR SFSSRS+FDSDGRGDRFGGDRDRYVDDRYNGG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein1.0e-8690.5Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MA+KDE+RIFVGGLSWNISE QLENAF RFGK+LETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQEL E IISVNKAEPKME DDTE GFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GRASFGRGKD+SV QDECFKCGRPGHWARD PSV G RGGGRGSFSSRS+FDSDGRGDRFGGDRDRYVD+RYNGG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

A0A5A7T4L2 Glycine-rich RNA-binding family protein1.0e-7587.65Show/hide
Query:  LSWNIS-ECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG
        LSW +S E  L N     G  +E  IMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELRE IISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG
Subjt:  LSWNIS-ECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFGRG

Query:  KDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGGAIW
        KDKSV QDECFKC RPGHWARDYPSV GERGGGRGSFSSRS+FDSDGRGDRFGGDRDRYVDDRYNGGAIW
Subjt:  KDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGGAIW

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X15.1e-8387.15Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MA KDE+RIFVGGLSWNISE QLENAF+R+GKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG+EL E  ISVNKAEPKME DD EPGFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GR SFGRG D+SV QDECFKCGRPGHWARD PSV G RG GRGSFSSRS+FDSD RGDRFGGDRDRYVDDRY+GG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like1.5e-8285.47Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MAAKDE+RIFVGGLSWN+SE +LENAF+R+GKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E  E IISVNKAEPKME DD EPGFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GRASFGRG D+SV QDECFKCGRPGHWARD PS  G RG GRGSFSSRS+FD D RGDRFGGDRDRYVDDRY+GG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C1.5e-8285.47Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG
        MAAKDE+RIFVGGLSWN+SE +LENAF+R+GKI+ETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHG E  E IISVNKAEPKME DD EPGFRGGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGG

Query:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG
        YSS GRASFGRG D+SV QDECFKCGRPGHWARD PS  G RG GRGSFSSRS+FD D RGDRFGGDRDRYVDDRY+GG
Subjt:  YSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGG

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B1.5e-4458.18Show/hide
Query:  EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSG
        E RIFVGGLSW+++E QLE+ F+R+GKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+EL   +ISVNKAEPK+  +D +   +GGGYSS G
Subjt:  EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSG

Query:  RASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD
        + +          +DECFKC RPGHWARD PS   +R   R   + RS+  D DG  DR+ GDRD
Subjt:  RASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD

P49310 Glycine-rich RNA-binding protein GRP1A7.7e-2038.32Show/hide
Query:  MAAKD-EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGG
        MA+ D E+R FVGGL+W   +  LE AF+++G++L+++I+ +R+TGR RGFGF+TF D + M DAI  M+GQ+L    I+VN+A+ +           GG
Subjt:  MAAKD-EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGG

Query:  GYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGG
        GY S G   +G G             GR G ++      S  RGGG G +    + D  G G  +GG
Subjt:  GYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGG

P49311 Glycine-rich RNA-binding protein GRP2A7.7e-2037.21Show/hide
Query:  MAAKD-EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKME-----DDDTEP
        MA+ D E+R FVGGL+W   E  LE AF++FG++++++I+ +R+TGR RGFGF+TF D + M DAI  M+GQ+L    I+VN+A+ +             
Subjt:  MAAKD-EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKME-----DDDTEP

Query:  GFRGGGYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGG
        G+RGGG    G   +G G+    R+   +  G  G+           RGGG G +    + D  G G   GG
Subjt:  GFRGGGYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C4.5e-5260.1Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEP-GFRGG
        MAAK+  RIFVGGLS  +++  LE AF+RFG IL+ QIMLERDTGR RGFGFITFADRR MD++IREMHG++  + +ISVN+AEPK+  DD E  G RGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEP-GFRGG

Query:  ---GYSSSGRASFGRGKDKS--VRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF--DSDGRGDRFGG-----DRDRYVDDRYNGGA
           GYS +G+ SFG G      V +DECFKCGR GHWARD PS  G RGG  G FSSR+     SDGR DR+       DR+RY+DDRY+G A
Subjt:  ---GYSSSGRASFGRGKDKS--VRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF--DSDGRGDRFGG-----DRDRYVDDRYNGGA

Q9LIN3 Glycine-rich RNA-binding protein RZ1A4.1e-2940.64Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKM----EDDDTEPGF
        M+   E+R F+GGL+W  S+  L +AF ++G ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +L    I+V+KA+P       D+D + G 
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKM----EDDDTEPGF

Query:  RGGGYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGR----GDRFGGDRDRY--VDDRYN
          G      R S GRG        +CFKCG+PGH+AR+ PS S   GGGR S         D R     DR+G   DRY   DDRY+
Subjt:  RGGGYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGR----GDRFGGDRDRY--VDDRYN

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.1e-4558.18Show/hide
Query:  EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSG
        E RIFVGGLSW+++E QLE+ F+R+GKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+EL   +ISVNKAEPK+  +D +   +GGGYSS G
Subjt:  EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSG

Query:  RASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD
        + +          +DECFKC RPGHWARD PS   +R   R   + RS+  D DG  DR+ GDRD
Subjt:  RASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.1e-4558.18Show/hide
Query:  EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSG
        E RIFVGGLSW+++E QLE+ F+R+GKI E QIM+ RDTGRPRGFGFITF DRRG DDAI+ MHG+EL   +ISVNKAEPK+  +D +   +GGGYSS G
Subjt:  EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSG

Query:  RASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD
        + +          +DECFKC RPGHWARD PS   +R   R   + RS+  D DG  DR+ GDRD
Subjt:  RASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF-DSDGRGDRFGGDRD

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.9e-3040.64Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKM----EDDDTEPGF
        M+   E+R F+GGL+W  S+  L +AF ++G ++E +++L++ +GR RGFGFITF +++ MD+AI  M+G +L    I+V+KA+P       D+D + G 
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKM----EDDDTEPGF

Query:  RGGGYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGR----GDRFGGDRDRY--VDDRYN
          G      R S GRG        +CFKCG+PGH+AR+ PS S   GGGR S         D R     DR+G   DRY   DDRY+
Subjt:  RGGGYSSSGRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGR----GDRFGGDRDRY--VDDRYN

AT4G39260.1 cold, circadian rhythm, and RNA binding 13.0e-1935.96Show/hide
Query:  EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPK-MEDDDTEPGFRGGGYSSS
        E+R FVGGL+W  ++  L+  F++FG +++++I+ +R++GR RGFGF+TF D + M DAI EM+G+EL   +I+VN+A+ +         G  GGGY S 
Subjt:  EFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPK-MEDDDTEPGFRGGGYSSS

Query:  GRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGGAIW
        G   +  G             G  G+  R     SG  GGGRG +    + +  G G   GGD   Y      GG  W
Subjt:  GRASFGRGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGGAIW

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.2e-5360.1Show/hide
Query:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEP-GFRGG
        MAAK+  RIFVGGLS  +++  LE AF+RFG IL+ QIMLERDTGR RGFGFITFADRR MD++IREMHG++  + +ISVN+AEPK+  DD E  G RGG
Subjt:  MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEP-GFRGG

Query:  ---GYSSSGRASFGRGKDKS--VRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF--DSDGRGDRFGG-----DRDRYVDDRYNGGA
           GYS +G+ SFG G      V +DECFKCGR GHWARD PS  G RGG  G FSSR+     SDGR DR+       DR+RY+DDRY+G A
Subjt:  ---GYSSSGRASFGRGKDKS--VRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQF--DSDGRGDRFGG-----DRDRYVDDRYNGGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGAAAGACGAGTTTCGAATATTTGTTGGAGGCCTCTCATGGAACATCTCAGAGTGTCAGCTCGAAAACGCTTTCAATCGCTTCGGAAAAATTCTCGAAACTCA
AATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTCGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGATGCAATCAGAGAGATGCATGGCCAGGAGCTTC
GTGAGTGGATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGATGATGATACCGAGCCAGGCTTCAGGGGAGGAGGTTATTCATCTAGTGGTAGGGCTAGTTTTGGG
AGAGGAAAAGATAAATCTGTGAGGCAGGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTATCCCTCTGTCAGTGGTGAACGTGGTGGGGGTAGAGG
TTCATTTTCATCACGTTCTCAATTTGACAGTGATGGCCGTGGGGATCGTTTTGGAGGAGACCGTGATCGATATGTGGATGACCGTTATAATGGAGGGGCGATATGGTGA
mRNA sequenceShow/hide mRNA sequence
GTGGTTAAATTTTTTTTTTCTTTTTTTTGCCGTTTATCTAAACACATGTCCATCACCAGAAAAGAAAAGAGTAAAGCCCAAGCCCAAGCTGAAATCAACTTTGAATTTAG
TACGGACGGCGGAATAACTCGACCACGGACCTTAGACGCTAGGGTTTAAACGTTGGACCCTAAAAACCCTCAACCTTTTGGAGCTCATTGCTTCACTGCACATCACAAAG
GAATTTTATCTGATTGATAGTTGAAAACGGTAATGGCTGCGAAAGACGAGTTTCGAATATTTGTTGGAGGCCTCTCATGGAACATCTCAGAGTGTCAGCTCGAAAACGCT
TTCAATCGCTTCGGAAAAATTCTCGAAACTCAAATCATGTTAGAACGAGATACAGGTCGTCCTCGTGGGTTCGGTTTTATTACCTTTGCAGACCGTAGAGGGATGGATGA
TGCAATCAGAGAGATGCATGGCCAGGAGCTTCGTGAGTGGATTATCTCAGTAAATAAGGCTGAACCCAAGATGGAGGATGATGATACCGAGCCAGGCTTCAGGGGAGGAG
GTTATTCATCTAGTGGTAGGGCTAGTTTTGGGAGAGGAAAAGATAAATCTGTGAGGCAGGATGAATGCTTCAAGTGTGGACGCCCAGGGCATTGGGCACGAGACTATCCC
TCTGTCAGTGGTGAACGTGGTGGGGGTAGAGGTTCATTTTCATCACGTTCTCAATTTGACAGTGATGGCCGTGGGGATCGTTTTGGAGGAGACCGTGATCGATATGTGGA
TGACCGTTATAATGGAGGGGCGATATGGTGATAGAGATCGTTTTGATCGTAGAGAAGACAAGTATGGAAGTCGAGACCGCTACTTCGACGACAGGTACCCATCTGCTGGA
GATCGCTTTACTAGTAGTGATAGGTATGATGTTAGTAATCGTTATCCTCAGAATGGCTACGTCAAAGACCGCGGCTACGATAGGGATATTGGTCCAAGGAGTGGCAGTGA
TAGGTATGGTAGCGGAGGTCCTGGCCGGTTGGGTTTTATGTCTTAAAACTCGTAGATAGTAAATATAATTTTGGTTCCTTATTATATTTTCTATCAGAAAAAATTTTCTC
TAAGAAAAGTTCCCTTATTCCAATTTTGGTTCCCACAAACCATCTCAATCAGAGAATAAGAAGGTTTCCAAGTGTTGGTGCCCCAAAATTTAGTGATTGGTAGATTCAGA
GTCGTCAACGAGCGTAAGTTTTTTCTTCTCTGCATTTTTCTTCAAAGCATGTTTAACCATAAAAATTGTTTTTTTTTTTTTGCCAATGTATTGGTATTTTTAAGGTTCCA
ATTAAAATTGAGTTTTTGTAATTCTTCCGCTGTAAAGGGTTTTCATCCCTTCATGGCTGTCATGAGGGCAGAAGTTATAGATAGGACAGGTCCTTACGATCGCCCAAGCA
GGGTGGGACGACCATCTTTCTACGACCGCTATTAAAATTCAAATATATGTATATCGATAGTTGTTGGTTAACATTTGCAAATCATTCTAGCTAGGATATGCACTTGCAAA
GAACTGGCAGTTTTTATTGCTTTTGAAAATATTTAGTAATAGAAATTTTGGGATGTTACAACTTACAATAACTAATATCTAATGTTTGTAGGCAGGTTCTAACTCTACCT
CCAGCCTCAGATATTTTAGTTCTCAATGTGGTGAATTACTCCGCTACCCCTGTTGACTTTGATTTGTTCTTTTCTTAGGAACTGAAGACAATTGACCCAACTTTCATTTT
CTTGAATCTCTGAATTCATTATTTAAAAGATCTTTATCTTTATATGGAAAAATATTGTTGAATGTTATTTATTTATAAGACCAAAGACTAATGCTGATTCTTTGGCATTT
TGTCAAATATGTAGGACTGTCGATTGAGAAAACCATTGCTGTATTGTGATAACCATTGACTCCTATCTTGCCTCTCACGACTCTATGATGGAACCCATTTTAGTAAATAA
TTAAGATTCTATTTGTTATCGATTTTGCT
Protein sequenceShow/hide protein sequence
MAAKDEFRIFVGGLSWNISECQLENAFNRFGKILETQIMLERDTGRPRGFGFITFADRRGMDDAIREMHGQELREWIISVNKAEPKMEDDDTEPGFRGGGYSSSGRASFG
RGKDKSVRQDECFKCGRPGHWARDYPSVSGERGGGRGSFSSRSQFDSDGRGDRFGGDRDRYVDDRYNGGAIW