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Cmc03g0077161 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0077161
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTranscription and mRNA export factor ENY2
Genome locationCMiso1.1chr03:24199363..24202297
RNA-Seq ExpressionCmc03g0077161
SyntenyCmc03g0077161
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0015031 - protein transport (biological process)
GO:0016578 - histone deubiquitination (biological process)
GO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0000124 - SAGA complex (cellular component)
GO:0005643 - nuclear pore (cellular component)
GO:0005654 - nucleoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0070390 - transcription export complex 2 (cellular component)
GO:0071819 - DUBm complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsIPR038212 - Transcription factor EnY2 superfamily
IPR018783 - Transcription factor, enhancer of yellow 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585223.1 Transcription and mRNA export factor ENY2, partial [Cucurbita argyrosperma subsp. sororia]5.8e-3593.18Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q T    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIR+FLASTAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
KAG7020143.1 Transcription and mRNA export factor SUS1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-3593.18Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q T    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIR+FLASTAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
XP_022951096.1 transcription and mRNA export factor SUS1 [Cucurbita moschata]2.6e-3594.32Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q T    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
XP_023002845.1 transcription and mRNA export factor ENY2 [Cucurbita maxima]5.8e-3593.18Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q T    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIR+FLASTAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
XP_038884208.1 transcription and mRNA export factor ENY2 [Benincasa hispida]2.6e-3594.32Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q T    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
TrEMBL top hitse value%identityAlignment
A0A0A0KIM7 Transcription and mRNA export factor ENY21.1e-3492.05Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q +    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
A0A1S3BDR5 Transcription and mRNA export factor ENY23.7e-3593.18Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q +    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
A0A6J1BSW0 Transcription and mRNA export factor ENY23.7e-3593.18Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q T    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
A0A6J1GGQ4 Transcription and mRNA export factor ENY21.3e-3594.32Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q T    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
A0A6J1KQ41 Transcription and mRNA export factor ENY22.8e-3593.18Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        Q T    LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIR+FLASTAI
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
SwissProt top hitse value%identityAlignment
B5FZ63 Transcription and mRNA export factor ENY29.7e-2565.52Show/hide
Query:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
        ++T    LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA  A
Subjt:  QSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
Q3ZBJ0 Transcription and mRNA export factor ENY21.7e-2470Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
        LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA  A
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
Q6NQ54 Transcription and mRNA export factor ENY26.1e-2769.14Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL RI++F+ S A+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
Q9JIX0 Transcription and mRNA export factor ENY21.7e-2470Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
        LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA  A
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
Q9NPA8 Transcription and mRNA export factor ENY21.7e-2470Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
        LIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPKGRA VPDSVK ELLQRIR+FLA  A
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTA
Arabidopsis top hitse value%identityAlignment
AT3G27100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).4.3e-2869.14Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
        L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL RI++F+ S A+
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI
AT3G27100.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).6.2e-1965Show/hide
Query:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV
        L+ESGEKE L EL+R+RL+ECGWKDEM+  CR +V+KKGR +V+VD+L++VITPKGR  +
Subjt:  LIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCACTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCAT
TGAATGCGGCTGGAAAGATGAGATGAAAGCACTCTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAG
GCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGCATCAACAGCCATTTAA
mRNA sequenceShow/hide mRNA sequence
AAAATCCGCCACTTATCGTCGTCTCCAGTCAGCTGTTCCTCGCGGTGTAGTTGGACGCGCTGTGTCGCCGTGAAAGTGAAATTTTTTCAACAACAATCTCTAACCATAAT
CTTTGATAATTGAATGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCA
CTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTCTGCAGGGCATATGTAAGGAA
GAAAGGAAGGAACAATGTTAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGAT
CTTTCCTTGCATCAACAGCCATTTAACATACACGAGATGACTACAAGCTGCAGAAAAGTATCTCCTTCATATCCTTACTAAACCGGCTAAAACCAATTAATCTATACCTA
TAAAATGAATTTGTTTGAACTTGTCGAATTTTATCGATTCTGTTGGAGAATCCAAGTCAAGTTCCATCTTCAGGTTAGAAGAATGTCGCATTGTGTAAGCTCGCAGTCAA
CGAGAACCGGGTTGGTGAGTGTTTTTGTTGTAGAATATGCATGTAAAAAGCTAGCTGTATGAGATTTATGAAAGACTCTCTAACTTTCATGATAACAAGTCTGTTTTTAC
TGAAAATTTGGTCAATTGTAACTCTTGGTTGGGTCTACTTCAATGGCATATTATATATTTTGGATTTGTTCCATTGTTATTTTATTTTCTATATCTTGGGTGTGGGAATC
AAACCTCCGACTTGGAGATGGATGTTGCTTATATTGCCCTAACATCATTTTCATTATTTGCCAAGCAGTTC
Protein sequenceShow/hide protein sequence
MIENTNPLFKNQSTSRSALIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI