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Cmc03g0078461 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0078461
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionhippocampus abundant transcript 1 protein-like
Genome locationCMiso1.1chr03:25148702..25150405
RNA-Seq ExpressionCmc03g0078461
SyntenyCmc03g0078461
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
GO:0038023 - signaling receptor activity (molecular function)
InterPro domainsIPR036259 - MFS transporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064852.1 hippocampus abundant transcript 1 protein-like [Cucumis melo var. makuwa]9.7e-46100Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
KGN62523.2 hypothetical protein Csa_018545 [Cucumis sativus]1.9e-4191Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        MLSML+IFWQPCLQSIVSKQVGASEQGKAQGCISGISLF+NVVSPLVFSPLTALFLSENAPFYFPGFSI C+GASVM+AFVRSILMR PT+ATTS+ VEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
XP_004142991.1 hippocampus abundant transcript 1 protein [Cucumis sativus]1.9e-4191Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        MLSML+IFWQPCLQSIVSKQVGASEQGKAQGCISGISLF+NVVSPLVFSPLTALFLSENAPFYFPGFSI C+GASVM+AFVRSILMR PT+ATTS+ VEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
XP_008445313.1 PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis melo]9.7e-46100Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
XP_038884303.1 hippocampus abundant transcript 1 protein-like [Benincasa hispida]1.1e-3884Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        MLS+LFIFWQPCLQSIVSKQVGASEQGKAQGCISGIS F+NVVSPL+FSPLTALFLSENAPFYFPGFSI+C G+S M+AFV+SIL+R PT+A++SS+VEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
TrEMBL top hitse value%identityAlignment
A0A0A0LQI3 MFS domain-containing protein9.1e-4291Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        MLSML+IFWQPCLQSIVSKQVGASEQGKAQGCISGISLF+NVVSPLVFSPLTALFLSENAPFYFPGFSI C+GASVM+AFVRSILMR PT+ATTS+ VEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
A0A1S3BCD2 hippocampus abundant transcript 1 protein-like4.7e-46100Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
A0A1S3BCD9 hippocampus abundant transcript 1 protein-like1.4e-3780Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        M S+LFIFW+PCLQSIVSKQVGASEQGKAQGCISGIS F+NVVSPLVFSPLTALFLS+NAPFYFPGFSI+CAG++ M+AFV+S+++R P++A +SSHVEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
A0A5A7V915 Hippocampus abundant transcript 1 protein-like4.7e-46100Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
A0A5A7V9L6 Hippocampus abundant transcript 1 protein-like1.4e-3780Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
        M S+LFIFW+PCLQSIVSKQVGASEQGKAQGCISGIS F+NVVSPLVFSPLTALFLS+NAPFYFPGFSI+CAG++ M+AFV+S+++R P++A +SSHVEA
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16970.1 Major facilitator superfamily protein1.6e-2260.49Show/hide
Query:  IFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMR
        +F  P +  I S+QVG  EQGK QGCISG+  FS VV+P ++SPLTALFLSE APFYFPGFS+LC   S+M+ F  S+L+R
Subjt:  IFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMR
AT2G16980.2 Major facilitator superfamily protein2.2e-2462.96Show/hide
Query:  IFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMR
        +F  P +  I S+QVG+SEQGK QGCISG+  F+ VV+P V+SPLTALFLSENAPFYFPGFSILC   S+M+ F++S+L++
Subjt:  IFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMR
AT2G16990.1 Major facilitator superfamily protein2.7e-2259.26Show/hide
Query:  IFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMR
        +F  P +  I S+QVG  EQGK QGCISG+  F  VV+P VFSPLTALFLS+NAPFYFPGFS+LC   S ++ F +S+L++
Subjt:  IFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMR
AT2G16990.2 Major facilitator superfamily protein2.7e-2259.26Show/hide
Query:  IFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMR
        +F  P +  I S+QVG  EQGK QGCISG+  F  VV+P VFSPLTALFLS+NAPFYFPGFS+LC   S ++ F +S+L++
Subjt:  IFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMR
AT5G42210.1 Major facilitator superfamily protein2.7e-2256.67Show/hide
Query:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPT
        + ++  IF   C++SIVSKQV + EQGKAQG IS I   +NV+SPL FSPLT  FLSE APF FPGFSI+CAG ++ +AF++S+++R  T
Subjt:  MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCCATGTTGTTTATTTTCTGGCAGCCTTGTCTGCAAAGCATTGTGTCGAAACAAGTTGGTGCAAGCGAGCAGGGTAAGGCTCAAGGATGCATTTCAGGC
ATATCTTTATTTTCGAATGTTGTTTCTCCATTGGTATTCTCCCCTTTAACAGCTTTGTTTCTCTCTGAAAACGCTCCATTTTATTTCCCTGGATTTAGCATCTTG
TGCGCTGGAGCTTCTGTTATGTTAGCATTTGTTCGAAGTATCCTGATGAGGACTCCTACCAGAGCCACCACCAGCAGCCATGTGGAAGCCTAA
mRNA sequenceShow/hide mRNA sequence
GCTTTTTTTCTACAGCGTTCAGATGCTTCTTTACAGCATTGCTTGGGCTGACTGGGTTGTCTATGTTGCTACAATGCTTTCCATGTTGTTTATTTTCTGGCAGCC
TTGTCTGCAAAGCATTGTGTCGAAACAAGTTGGTGCAAGCGAGCAGGGTAAGGCTCAAGGATGCATTTCAGGCATATCTTTATTTTCGAATGTTGTTTCTCCATT
GGTATTCTCCCCTTTAACAGCTTTGTTTCTCTCTGAAAACGCTCCATTTTATTTCCCTGGATTTAGCATCTTGTGCGCTGGAGCTTCTGTTATGTTAGCATTTGT
TCGAAGTATCCTGATGAGGACTCCTACCAGAGCCACCACCAGCAGCCATGTGGAAGCCTAAGCTCTTCCCCTGCTCATATTTTTGTTAAATAGTGTACAAATTTG
ATTGTTATTCAAAAAGTTTTTTTTTTAAAAATAATTTTATTTTCATTTTTTAACGATCATCAGGTCGTGGCAAACGATTTCTAACATGTTCACGTAGGTTGAGCT
ATGTTCATTTTTATTTGTTTAATTAAAAAAATTAAAGAATAAAAATAGTTTTTTTTTCCCTC
Protein sequenceShow/hide protein sequence
MLSMLFIFWQPCLQSIVSKQVGASEQGKAQGCISGISLFSNVVSPLVFSPLTALFLSENAPFYFPGFSILCAGASVMLAFVRSILMRTPTRATTSSHVEA