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Cmc03g0079971 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0079971
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionHistone deacetylase 18-like protein
Genome locationCMiso1.1chr03:25978536..25980213
RNA-Seq ExpressionCmc03g0079971
SyntenyCmc03g0079971
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064965.1 uncharacterized protein E6C27_scaffold82G002860 [Cucumis melo var. makuwa]8.1e-7599.29Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        NLPRPAARRRWDPAALPHTAPAPQLRTTN ASLSTRCFSM
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

KAE8652190.1 hypothetical protein Csa_022219 [Cucumis sativus]5.9e-5787.22Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        M MATTCC+NNLNPPPRL+QNSTASTN PLLP NG+G +WWRKRCVLG AGVMTALVMSGES GVEM N+N FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASL
        NLPRPAARRRWDPAALP T PAPQLRTTNT SL
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASL

XP_008445145.1 PREDICTED: uncharacterized protein LOC103488267 [Cucumis melo]2.1e-7599.29Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTAL+MSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

XP_022997474.1 uncharacterized protein LOC111492380 [Cucurbita maxima]2.2e-5178.57Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        MAM+TTCC+NNLNPPPRL   ST  T N LLP NG+G++ W+KRCVLGV GV  AL M GESGGVEMG+VN FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        NLPRPAARRRW+PAALP T  APQLRT +T+SLSTRCFSM
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

XP_038884319.1 uncharacterized protein LOC120075190 [Benincasa hispida]2.2e-5679.29Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        M+MATTCC+NNLNPPP+L QNST S NN L+P NG+G +WW+KR VL VAGV TAL+M+GESGGVEMGNVN  + +SRKWSEERMCPQWRLNSLET+VPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        NLPRP  RRRWDPAALPHTAPAPQLRTT+T SLSTRCFS+
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

TrEMBL top hitse value%identityAlignment
A0A0A0LLU6 Uncharacterized protein1.5e-6187.86Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        M MATTCC+NNLNPPPRL+QNSTASTN PLLP NG+G +WWRKRCVLG AGVMTALVMSGES GVEM N+N FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        NLPRPAARRRWDPAALP T PAPQLRTTNT SLSTRCFSM
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

A0A1S3BBI5 uncharacterized protein LOC1034882671.0e-7599.29Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTAL+MSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

A0A5A7VGF0 Uncharacterized protein3.9e-7599.29Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        NLPRPAARRRWDPAALPHTAPAPQLRTTN ASLSTRCFSM
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

A0A6J1EPL8 uncharacterized protein LOC1114362275.7e-5077.3Show/hide
Query:  MAMA-TTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVP
        MAM+ TTCC+NNLNPPPRL   ST  T N LLP NG+G++ W+KRCVLGV GV  AL M GESGGVEMG+VN FVD SRKWSEERMCPQWRLNSLETIVP
Subjt:  MAMA-TTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVP

Query:  ENLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        ENLPRPAARRRW+PAALP T  APQLRT +T+SLSTRCFS+
Subjt:  ENLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

A0A6J1KBE7 uncharacterized protein LOC1114923801.0e-5178.57Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE
        MAM+TTCC+NNLNPPPRL   ST  T N LLP NG+G++ W+KRCVLGV GV  AL M GESGGVEMG+VN FVD SRKWSEERMCPQWRLNSLETIVPE
Subjt:  MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPE

Query:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        NLPRPAARRRW+PAALP T  APQLRT +T+SLSTRCFSM
Subjt:  NLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25625.1 unknown protein3.4e-1036.31Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTAS------TNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSG----ESGGVEMGNVNSFVDN-------SRKWSEE
        MA   +CC   LN PP L  NS  S      T + +       +   RK     V GV   +V+ G    +   VE   V S V+         R+WS++
Subjt:  MAMATTCCVNNLNPPPRLYQNSTAS------TNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSG----ESGGVEMGNVNSFVDN-------SRKWSEE

Query:  RMCPQWRLNSLETIVPENLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
        R CP W  NSLETIVPENLPRP+A RR + A L     AP +    T      CFS+
Subjt:  RMCPQWRLNSLETIVPENLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM

AT2G25625.2 unknown protein4.4e-1036.54Show/hide
Query:  MAMATTCCVNNLNPPPRLYQNSTAS------TNNPLLPLNGSGDQWWRKRC--VLGVAG-VMTALVMSGESGGVEMGNVNSFVDN-------SRKWSEER
        MA   +CC   LN PP L  NS  S      T + +     +  +  + +C  VLGVA  V+   +   +   VE   V S V+         R+WS++R
Subjt:  MAMATTCCVNNLNPPPRLYQNSTAS------TNNPLLPLNGSGDQWWRKRC--VLGVAG-VMTALVMSGESGGVEMGNVNSFVDN-------SRKWSEER

Query:  MCPQWRLNSLETIVPENLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM
         CP W  NSLETIVPENLPRP+A RR + A L     AP +    T      CFS+
Subjt:  MCPQWRLNSLETIVPENLPRPAARRRWDPAALPHTAPAPQLRTTNTASLSTRCFSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGCCACTACCTGCTGTGTTAACAACCTCAATCCGCCGCCGCGTTTGTATCAAAATTCCACCGCATCCACCAACAACCCACTGCTCCCACTGAACGGAAGTGG
AGATCAATGGTGGCGAAAACGGTGCGTTTTGGGAGTAGCCGGAGTGATGACGGCGCTGGTAATGAGCGGAGAAAGCGGAGGCGTAGAAATGGGAAATGTTAATAGTTTTG
TTGATAATTCAAGAAAATGGAGCGAAGAAAGAATGTGCCCGCAATGGCGCCTCAATTCCCTCGAAACAATCGTGCCGGAGAATCTTCCGAGGCCGGCCGCTCGCCGGAGA
TGGGACCCCGCCGCCCTTCCTCACACGGCGCCGGCCCCTCAACTGCGAACCACAAATACAGCCTCCCTTTCTACTCGCTGCTTCTCCATGTAA
mRNA sequenceShow/hide mRNA sequence
TTAGGAACTTGAAAGCTATAAAAAGTTTGTTTCATAAAATTTGTCAAACCCAAGATTGTTTCCAATCAAAGTAAAATTTCTAACCCAATCTGGGGGAATTCCAAACTTTC
TGGACTTCCCTTGCCGTCGTTCTCAACTATCGTGAGCTGACCAACAACCTCCACCGCCGCCGCTTCCTCCTCATTCTTTTCAACTATTCCAAATCCCATCTATCTCTCTC
CCCAAAATCCACAGAGAAATACATTTGAAAAAAGGAAAAAAAAAAAAAACAGAGAGAGAGAGAGAGAGAATGGCTATGGCCACTACCTGCTGTGTTAACAACCTCAATCC
GCCGCCGCGTTTGTATCAAAATTCCACCGCATCCACCAACAACCCACTGCTCCCACTGAACGGAAGTGGAGATCAATGGTGGCGAAAACGGTGCGTTTTGGGAGTAGCCG
GAGTGATGACGGCGCTGGTAATGAGCGGAGAAAGCGGAGGCGTAGAAATGGGAAATGTTAATAGTTTTGTTGATAATTCAAGAAAATGGAGCGAAGAAAGAATGTGCCCG
CAATGGCGCCTCAATTCCCTCGAAACAATCGTGCCGGAGAATCTTCCGAGGCCGGCCGCTCGCCGGAGATGGGACCCCGCCGCCCTTCCTCACACGGCGCCGGCCCCTCA
ACTGCGAACCACAAATACAGCCTCCCTTTCTACTCGCTGCTTCTCCATGTAAATAACGAAACAAACCAAATACACAATTTACCATTTCTTCAAATACCATTTTACAAAAT
ATTAAATTTTTAAAATATAAATATTACTTCAAACGTTCCCTCATTTTACTCAATTCTTCAATTCTAGTCTATACATACATACATACATACATACATACA
Protein sequenceShow/hide protein sequence
MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPENLPRPAARRR
WDPAALPHTAPAPQLRTTNTASLSTRCFSM