; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc03g0080921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc03g0080921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTranslation initiation factor IF-2
Genome locationCMiso1.1chr03:26602571..26606618
RNA-Seq ExpressionCmc03g0080921
SyntenyCmc03g0080921
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN62818.1 hypothetical protein Csa_022087 [Cucumis sativus]5.9e-9898.54Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTISSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKI+NDSDDDDDFILSP
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

XP_004150287.1 uncharacterized protein LOC101205851 isoform X2 [Cucumis sativus]5.9e-9898.54Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTISSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKI+NDSDDDDDFILSP
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

XP_008445018.1 PREDICTED: uncharacterized protein LOC103488185 isoform X1 [Cucumis melo]6.9e-99100Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

XP_031736856.1 uncharacterized protein LOC101205851 isoform X1 [Cucumis sativus]1.6e-9593.95Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTISSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEF----------WMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDS
        PLRIFYESLSKQIPASEMAEF          WMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKI+NDS
Subjt:  PLRIFYESLSKQIPASEMAEF----------WMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDS

Query:  DDDDDFILSPKRRKM
        DDDDDFILSPKRRKM
Subjt:  DDDDDFILSPKRRKM

XP_038885128.1 uncharacterized protein LOC120075630 isoform X1 [Benincasa hispida]2.9e-8993.66Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
        MVSD K TLSKLKPDGGSRLKLESSDHKKKIDSSIKNSI SSKHKS+SLVTKSEVKSKTISSSSKTTTKTTTTTT TAKVREKK+FNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAY+KKLRRQKEQRTGTPIK  SAKP SRPESSQ+PQ PSKNGD+KAKKKIMNDSDDDDDFILSP
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

TrEMBL top hitse value%identityAlignment
A0A0A0LLY4 Uncharacterized protein2.8e-9898.54Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTK+EVKSKTISSSSKTTTKTTTTTTATAKVREKK+FNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKI+NDSDDDDDFILSP
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

A0A1S3BCG5 uncharacterized protein LOC103488185 isoform X13.4e-99100Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
        MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP
        PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSP

Query:  KRRKM
        KRRKM
Subjt:  KRRKM

A0A6J1BR23 uncharacterized protein LOC111004987 isoform X16.6e-7178.37Show/hide
Query:  MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPE
        MV++ K T+SKLKP   DGGSRLKLESSD+K+KI+SS K+SI  SK KS S++ KSEVKSK  SSSSKTT+KTTTTTT T KVREKK++NL GQKYDPPE
Subjt:  MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFI
        EREPLRIFYESLSKQIP SEMAEFWMMEHGMLSPEKAK+AYEKKLRRQKEQRTGTP+K  S K  S+PESSQ+ Q  SKNGD+KAKKKI NDS +DDDFI
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFI

Query:  LSPKRRKM
        LSPKRRKM
Subjt:  LSPKRRKM

A0A6J1GJC9 uncharacterized protein LOC111454380 isoform X16.0e-7280.86Show/hide
Query:  MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPE
        MVSDPK T+SK+K    DGGSRLKLESSD+KK       +S+ SSKHKSVS++ KSEVKSKTI+SSSKTTTK    TT+TAKVREKK+FNL GQKYDPPE
Subjt:  MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDD-DF
        EREPLRIFYESLSKQI  SEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK  S KP SRPESSQRPQ PSKNGD+KAKKKI N+SDDDD DF
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDD-DF

Query:  ILSPKRRKM
        ILSPKRRKM
Subjt:  ILSPKRRKM

A0A6J1K794 uncharacterized protein LOC1114917881.7e-7181.43Show/hide
Query:  MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPE
        MVS+PK T+SK KP   DGGSRL         KIDSSIKNS PSSKHKSVS+VTKSEVKSKT SSSS+ TTKTTTT T TAKVREKK++NLPGQK DPPE
Subjt:  MVSDPKSTLSKLKP---DGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPE

Query:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKI-MNDSDDDDD-
        EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIK  S K LS+PESSQRPQ PSKNGD+KAK+K+  NDSDDDDD 
Subjt:  EREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKI-MNDSDDDDD-

Query:  FILSPKRRKM
        FILSPKRRKM
Subjt:  FILSPKRRKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19990.1 unknown protein2.4e-2036.28Show/hide
Query:  STLSKLKPDGGS-----RLKLESSDHKKKIDSSIKNSIPSSKHKSVSLV-------TKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYD
        S+ +K KP  G+     +LK E +D     +  IK+S+  S+ K V           K  V  +  S       K         K RE+K+++LPGQK +
Subjt:  STLSKLKPDGGS-----RLKLESSDHKKKIDSSIKNSIPSSKHKSVSLV-------TKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYD

Query:  PPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPES----------------SQRPQPPSKNG
         P+ER+PLRIFYESL KQIP S+MA+ W+ME G+L  EKAKK  EKKL  QK  +  +P+KSA++ P S  +S                S + +      
Subjt:  PPEEREPLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPES----------------SQRPQPPSKNG

Query:  DIKAKKKIMNDSDDDDDFILSPKRRK
          K +KK  +D D DDDF+ S   +K
Subjt:  DIKAKKKIMNDSDDDDDFILSPKRRK

AT5G11600.1 unknown protein6.8e-3648.31Show/hide
Query:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE
        + +  +  +S  KP          S+ K K+  +   +I ++   +  +  K++  S  +S     TT  T +       REKK+++L GQK+DPPEERE
Subjt:  MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEERE

Query:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNG-DIKAKKKIM-NDSDDDDDFIL
        PLRIFYESLSKQIP SEMAEFW+MEHGMLSPEKAK+A+EKK R+ K+ R GTP KSA     S+ ESSQR      NG D + KKK++ +D DDDDDFIL
Subjt:  PLRIFYESLSKQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNG-DIKAKKKIM-NDSDDDDDFIL

Query:  SPKRRKM
        S KRRK+
Subjt:  SPKRRKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCAGACCCCAAGTCCACTCTTTCGAAGCTCAAACCTGATGGCGGCTCCAGGTTAAAGCTTGAATCATCTGATCATAAGAAGAAGATTGACAGCTCCATCAAGAA
CTCAATTCCCTCTTCCAAGCACAAATCCGTCTCTCTTGTCACCAAATCTGAGGTAAAATCAAAGACAATTTCGAGTTCTTCAAAGACGACAACAAAGACTACAACAACTA
CTACTGCTACTGCTAAAGTGAGAGAAAAGAAAATCTTTAATTTGCCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCGCTTCGGATCTTCTACGAGTCCTTGTCG
AAACAAATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAAGGCATATGAGAAGAAACTGAGAAGACAAAAGGA
ACAGAGAACGGGGACTCCGATTAAATCAGCATCAGCAAAACCCCTGAGCAGACCAGAGAGTTCCCAGAGGCCACAACCGCCATCCAAGAATGGTGATATAAAAGCAAAGA
AAAAGATCATGAACGATAGTGACGATGACGACGACTTCATTTTAAGCCCCAAAAGAAGAAAAATGTAG
mRNA sequenceShow/hide mRNA sequence
GTTAAAAAACGAGAAAAACCATTTTTAATTAGCGAAATATTGATTGATGCTTTTCGTTTTCGGTTTCTTCTACCGTTATTTTTATTTTTATTTTCTATTATTATTGTTAT
CCTATTCACAAGCAATTCGAAGAATAGAGATTAGATTACCTTCTGTGTAGGAAGAAAGGAAGACGAGAGGAAGAAGAAGAAGATTGATTCTTCTGATAAATCCTCTAAAT
TAATAAACAGAAAAAGAAAAACCCATTATGGTTTCAGACCCCAAGTCCACTCTTTCGAAGCTCAAACCTGATGGCGGCTCCAGGTTAAAGCTTGAATCATCTGATCATAA
GAAGAAGATTGACAGCTCCATCAAGAACTCAATTCCCTCTTCCAAGCACAAATCCGTCTCTCTTGTCACCAAATCTGAGGTAAAATCAAAGACAATTTCGAGTTCTTCAA
AGACGACAACAAAGACTACAACAACTACTACTGCTACTGCTAAAGTGAGAGAAAAGAAAATCTTTAATTTGCCTGGTCAGAAATATGATCCACCTGAAGAGAGAGAGCCG
CTTCGGATCTTCTACGAGTCCTTGTCGAAACAAATACCAGCAAGTGAAATGGCAGAGTTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCTAAAAAGGCATA
TGAGAAGAAACTGAGAAGACAAAAGGAACAGAGAACGGGGACTCCGATTAAATCAGCATCAGCAAAACCCCTGAGCAGACCAGAGAGTTCCCAGAGGCCACAACCGCCAT
CCAAGAATGGTGATATAAAAGCAAAGAAAAAGATCATGAACGATAGTGACGATGACGACGACTTCATTTTAAGCCCCAAAAGAAGAAAAATGTAGGAAAAAGCACGCCGA
CGACCTTTTTCTTTTCTTTTCTTTTCTTTATTAGCATACTTTACAGTGAATTACTTGATTAAATTTCTTTAGAGTTTAACTGAAAACTACAGAGATGATCATAACCCAAC
AGTATTTACCAGGACATTCTTTTATGCTCAACAACCTGTGTATGAACAATAATTTAAGGAGAGACAAGTTTATGGTTCAAATCCTTTTCATATAATGCTTAATTTCCCTC
CGTTTCCATTCTGATAGATTCTACAGTATTTCCTCCAGTGGAGTATGACACCTTAATCAATAAGTG
Protein sequenceShow/hide protein sequence
MVSDPKSTLSKLKPDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKSKTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLS
KQIPASEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKNGDIKAKKKIMNDSDDDDDFILSPKRRKM