CuGenDBv2

Gene ID	Cmc03g0086341
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Coilin
Genome location	CMiso1.1chr03:29643440..29647431
RNA-Seq Expression	Cmc03g0086341
Synteny	Cmc03g0086341
Gene Ontology terms	GO:0000387 - spliceosomal snRNP assembly (biological process) GO:0015030 - Cajal body (cellular component) GO:0030619 - U1 snRNA binding (molecular function) GO:0030620 - U2 snRNA binding (molecular function)
InterPro domains	IPR024822 - Coilin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0061051.1 coilin-like isoform X1 [Cucumis melo var. makuwa]

1.2e-216

97.5

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Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQK  KFSSPEKDKR+MMRKQVKTRKKKVQQQRVEKSN+KLPDENYVED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
        SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL

Query:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
        KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYKKAMN DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
Subjt:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE

Query:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
        EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR   GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
Subjt:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

XP_004143057.1 coilin isoform X3 [Cucumis sativus]

1.2e-200

90.66

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Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFR EHNGRFQHKV LSEK L++KHK S+GHTD S+SN+QKLQKFSSP+KDKRKMMRKQVKT+KKKVQQQRVEKSN KLPDENY+ED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
        SEQLAGSSDD+EIVPVVIRPGHVRFLPLGQ EANQIVHP QASMD IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KL
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL

Query:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE
        KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYK AMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE 
Subjt:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE

Query:  AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
         AGNIREASG KQSWNKWENHST PKQSWNK GENHPKPPKQSWKKW+D TSVRGN KEN WDEILQAF AKKA L NEVRWRTGE KAWEGAHDP
Subjt:  AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

XP_008444385.1 PREDICTED: coilin-like isoform X1 [Cucumis melo]

8.4e-218

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Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKR+MMRKQVKTRKKKVQQQRVEKSN+KLPDENYVED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
        SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL

Query:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
        KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYKKAMN DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
Subjt:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE

Query:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
        EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR   GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
Subjt:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

XP_008444386.1 PREDICTED: coilin-like isoform X2 [Cucumis melo]

3.4e-219

98.25

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Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKR+MMRKQVKTRKKKVQQQRVEKSN+KLPDENYVED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLK
        SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLK
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLK

Query:  PCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE
        PCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYKKAMN DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE
Subjt:  PCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE

Query:  AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
        AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR   GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
Subjt:  AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

XP_008444387.1 PREDICTED: coilin-like isoform X3 [Cucumis melo]

2.0e-219

98.74

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Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKR+MMRKQVKTRKKKVQQQRVEKSN+KLPDENYVED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
        SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL

Query:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
        KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYKKAMN DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
Subjt:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE

Query:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
        EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
Subjt:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQQ3 Coilin

2.5e-199

89.97

Show/hide

Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFR EHNGRFQHKV LSEK L++KHK S+GHTD S+SN+QKLQKFSSP+KDKRKMMRKQVKT+KKKVQQQRVEKSN KLPDENY+ED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
        SEQLAGSSDD+EIVPVVIRPGHVRFLPLGQ EANQIVHP QASMD IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KL
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL

Query:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE
        KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYK AMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE 
Subjt:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE

Query:  AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
         AGNIREASG KQSWNKWENHST PKQSWNK GENHPKPPKQSWKKW+D TSVR   GN KEN WDEILQAF AKKA L NEVRWRTGE KAWEGAHDP
Subjt:  AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

A0A1S3BA97 Coilin

4.1e-218

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Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKR+MMRKQVKTRKKKVQQQRVEKSN+KLPDENYVED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
        SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL

Query:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
        KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYKKAMN DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
Subjt:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE

Query:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
        EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR   GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
Subjt:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

A0A1S3BAZ0 Coilin

1.6e-219

98.25

Show/hide

Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKR+MMRKQVKTRKKKVQQQRVEKSN+KLPDENYVED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLK
        SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLK
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLK

Query:  PCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE
        PCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYKKAMN DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE
Subjt:  PCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEE

Query:  AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
        AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR   GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
Subjt:  AAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

A0A1S3BB08 Coilin

9.6e-220

98.74

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Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKR+MMRKQVKTRKKKVQQQRVEKSN+KLPDENYVED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
        SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL

Query:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
        KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYKKAMN DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
Subjt:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE

Query:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
        EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
Subjt:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

A0A5A7V5I3 Coilin

5.9e-217

97.5

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Query:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED
        MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQK  KFSSPEKDKR+MMRKQVKTRKKKVQQQRVEKSN+KLPDENYVED
Subjt:  MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVED

Query:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
        SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL
Subjt:  SEQLAGSSDDEEIVPVVIRPGHVRFLPLGQ-EANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKL

Query:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
        KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIM IPVPEYPFVYKKAMN DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE
Subjt:  KPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMN-DESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE

Query:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
        EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR   GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP
Subjt:  EAAGNIREASGAKQSWNKWENHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVR---GNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

SwissProt top hits

e value

%identity

Alignment

P38432 Coilin

1.5e-04

21.77

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Query:  RNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPI-----DFNKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI-----M
        R RG   S     + +N   Q      +   + +  P+     D++ L   A+ P+ G+ IA++L+EL+S+++P++S ++ G++L   PE  ++      
Subjt:  RNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPI-----DFNKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI-----M

Query:  TIPVPEYP----FVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIV
        ++P    P     VY      E +++   ++  +   +  LID +++
Subjt:  TIPVPEYP----FVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIV

Q09003 Coilin

2.1e-06

26.32

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Query:  TMNRPIDFNKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI-------MTIPVP-EYPFVYKKAMNDESIKHPYAEDGSLKTDY
        TM R  D++ L   A+ P+ G +IA++L+E+S  +TPE+S ++ GK+L   P   +I        T+  P ++  VY+    ++ +++   ++  +  ++
Subjt:  TMNRPIDFNKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI-------MTIPVP-EYPFVYKKAMNDESIKHPYAEDGSLKTDY

Query:  SSLIDIKIVEHKNS
        ++LI+ +++  K S
Subjt:  SSLIDIKIVEHKNS

Q5SU73 Coilin

2.6e-04

23.27

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Query:  KNVRNRGQRKSSSWTSNCNNCE-GQSSKPQAEKGLS--------TMNRPI-----DFNKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCK
        K +R RG R          +C   +SS+ Q ++ L+         +  P+     D++ L   A+ P+ G+ IA++L+EL+S ++P++S ++ GK+L   
Subjt:  KNVRNRGQRKSSSWTSNCNNCE-GQSSKPQAEKGLS--------TMNRPI-----DFNKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCK

Query:  PEANKI-----MTIPVPEYP----FVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIV
        PE  ++      ++P  + P     VY      E +++   ++  +   +  LID +++
Subjt:  PEANKI-----MTIPVPEYP----FVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIV

Q8RWK8 Coilin

6.4e-27

29.05

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Query:  KKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLP---------DENYVE--DSEQLAGSSD--DEEIVPVVIRPGH
        ++ K  N     S   K+   + +  +K KR+ +R++ K  K+++ Q ++  + S+ P          E + E  +++Q    SD   +E+VPV +RPGH
Subjt:  KKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLP---------DENYVE--DSEQLAGSSD--DEEIVPVVIRPGH

Query:  VRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCASLPERGDIIAYRLIELSST
        +RF PL    ++    ++  ++ +  NG   K    +   + S ++        + +  Q  +  +  N PID+ +L       ++GD+IAYRLIEL+S+
Subjt:  VRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCASLPERGDIIAYRLIELSST

Query:  WTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHP----YAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWE
        WTPE+SSFRVGK+ +  P++  +  +PV E+P   K   +D+    P    Y EDGSL+ ++S+L+D++ V+  +S   E A   + E            
Subjt:  WTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHP----YAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWE

Query:  NHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLS
             P QS         K PK S  K +  T  + N + + W+E+ +A SAKKA LS
Subjt:  NHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLS

Arabidopsis top hits

e value

%identity

Alignment

AT1G13030.1 sphere organelles protein-related

4.5e-28

29.05

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Query:  KKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLP---------DENYVE--DSEQLAGSSD--DEEIVPVVIRPGH
        ++ K  N     S   K+   + +  +K KR+ +R++ K  K+++ Q ++  + S+ P          E + E  +++Q    SD   +E+VPV +RPGH
Subjt:  KKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLP---------DENYVE--DSEQLAGSSD--DEEIVPVVIRPGH

Query:  VRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCASLPERGDIIAYRLIELSST
        +RF PL    ++    ++  ++ +  NG   K    +   + S ++        + +  Q  +  +  N PID+ +L       ++GD+IAYRLIEL+S+
Subjt:  VRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCASLPERGDIIAYRLIELSST

Query:  WTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHP----YAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWE
        WTPE+SSFRVGK+ +  P++  +  +PV E+P   K   +D+    P    Y EDGSL+ ++S+L+D++ V+  +S   E A   + E            
Subjt:  WTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHP----YAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWE

Query:  NHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLS
             P QS         K PK S  K +  T  + N + + W+E+ +A SAKKA LS
Subjt:  NHSTTPKQSWNKWGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGAAAAAAAGAGTTGTTCCAACTTCCAAATATTTGAAGTTTCGTGCAGAGCATAATGGTAGATTCCAGCACAAAGTTTTTCTTTCTGAAAAGAGACTGATCAAGAA
ACACAAACCATCCAACGGTCATACTGATGCAAGTGTCTCCAACAAGCAAAAGCTTCAAAAGTTTTCTTCTCCGGAAAAGGATAAAAGGAAAATGATGAGGAAGCAGGTCA
AAACTCGGAAGAAAAAGGTACAGCAACAAAGAGTTGAAAAGAGTAACAGTAAGTTACCTGATGAGAATTACGTTGAGGACTCTGAACAGCTAGCTGGCAGTAGTGATGAT
GAAGAAATTGTACCGGTGGTAATTAGACCCGGACATGTTCGTTTTCTGCCTCTTGGTCAAGAGGCAAACCAGATTGTCCATCCAGCTCAAGCTTCAATGGACACCATACG
GTTGAATGGGATGGCAGTTAAGAATGTAAGAAACAGGGGTCAAAGGAAATCCTCATCTTGGACGAGTAACTGCAATAACTGTGAAGGACAAAGTTCTAAGCCGCAAGCTG
AAAAAGGTTTATCGACTATGAACCGCCCAATTGACTTCAATAAGCTTAAACCTTGTGCTAGCTTGCCCGAGAGAGGTGATATAATTGCATATCGTTTAATAGAATTATCA
TCAACCTGGACTCCGGAACTTTCCTCCTTCAGAGTTGGAAAGGTATTGTGGTGTAAACCTGAAGCAAATAAGATTATGACGATTCCAGTTCCAGAATATCCATTTGTTTA
TAAGAAGGCGATGAATGATGAATCAATTAAACATCCATATGCAGAGGATGGCTCTTTAAAGACAGATTACTCCTCACTCATTGACATCAAAATCGTTGAGCATAAAAACT
CAGTAGGTTTTGAAGAAGCTGCCGGTAATATCAGAGAAGCATCCGGTGCAAAACAAAGCTGGAACAAGTGGGAGAACCATTCCACTACACCGAAACAAAGCTGGAACAAA
TGGGGGGAGAACCACCCCAAGCCACCAAAACAAAGCTGGAAAAAGTGGAAGGACAGTACCAGTGTACGGGGAAATGTAAAGGAAAATGCATGGGATGAAATTCTCCAGGC
TTTCAGCGCAAAGAAAGCTAATTTGTCCAATGAAGTTCGATGGAGAACAGGGGAGAAGAAAGCTTGGGAAGGAGCTCATGATCCATGA

mRNA sequence

Show/hide mRNA sequence

GGGAAGCGTTAAGAAAACACTTTCCAGCAAGAGGAAGGCACTGAAAACACTTCACAGTTCAAAGATGAAGAAAAAAAGAGTTGTTCCAACTTCCAAATATTTGAAGTTTC
GTGCAGAGCATAATGGTAGATTCCAGCACAAAGTTTTTCTTTCTGAAAAGAGACTGATCAAGAAACACAAACCATCCAACGGTCATACTGATGCAAGTGTCTCCAACAAG
CAAAAGCTTCAAAAGTTTTCTTCTCCGGAAAAGGATAAAAGGAAAATGATGAGGAAGCAGGTCAAAACTCGGAAGAAAAAGGTACAGCAACAAAGAGTTGAAAAGAGTAA
CAGTAAGTTACCTGATGAGAATTACGTTGAGGACTCTGAACAGCTAGCTGGCAGTAGTGATGATGAAGAAATTGTACCGGTGGTAATTAGACCCGGACATGTTCGTTTTC
TGCCTCTTGGTCAAGAGGCAAACCAGATTGTCCATCCAGCTCAAGCTTCAATGGACACCATACGGTTGAATGGGATGGCAGTTAAGAATGTAAGAAACAGGGGTCAAAGG
AAATCCTCATCTTGGACGAGTAACTGCAATAACTGTGAAGGACAAAGTTCTAAGCCGCAAGCTGAAAAAGGTTTATCGACTATGAACCGCCCAATTGACTTCAATAAGCT
TAAACCTTGTGCTAGCTTGCCCGAGAGAGGTGATATAATTGCATATCGTTTAATAGAATTATCATCAACCTGGACTCCGGAACTTTCCTCCTTCAGAGTTGGAAAGGTAT
TGTGGTGTAAACCTGAAGCAAATAAGATTATGACGATTCCAGTTCCAGAATATCCATTTGTTTATAAGAAGGCGATGAATGATGAATCAATTAAACATCCATATGCAGAG
GATGGCTCTTTAAAGACAGATTACTCCTCACTCATTGACATCAAAATCGTTGAGCATAAAAACTCAGTAGGTTTTGAAGAAGCTGCCGGTAATATCAGAGAAGCATCCGG
TGCAAAACAAAGCTGGAACAAGTGGGAGAACCATTCCACTACACCGAAACAAAGCTGGAACAAATGGGGGGAGAACCACCCCAAGCCACCAAAACAAAGCTGGAAAAAGT
GGAAGGACAGTACCAGTGTACGGGGAAATGTAAAGGAAAATGCATGGGATGAAATTCTCCAGGCTTTCAGCGCAAAGAAAGCTAATTTGTCCAATGAAGTTCGATGGAGA
ACAGGGGAGAAGAAAGCTTGGGAAGGAGCTCATGATCCATGAGAATCACTCCAGTGGGGTACATTTGCTAGCATGTAAAGTCAAGCACCTCAAGGGCAAGATGTCTATTT
TTCAATTTATGCAATATTGTACAAGATTTTGCTACATTCTCTGTAAAAGGCTATGGAACTTAGGGGCATTTTGTTTGAGTGTTTAGGCTCAATAATTTCATCTTGTTGTA
GAGAACTTTTCTATTCTATCATGGTGGAAGCAAAATGGGGAATGCTGCTTCGCTTCCATCTCAAGATAGAATATTTTCAGCTACAGGAGTATATTGTTTGTGCCTGCTAG
AGAAACTTTAATGTAACAAAAATACTTCAGGAATTTTGGTCACATATACCAACTAAGCAAAGAAATTACACGGCCT

Protein sequence

Show/hide protein sequence

MKKKRVVPTSKYLKFRAEHNGRFQHKVFLSEKRLIKKHKPSNGHTDASVSNKQKLQKFSSPEKDKRKMMRKQVKTRKKKVQQQRVEKSNSKLPDENYVEDSEQLAGSSDD
EEIVPVVIRPGHVRFLPLGQEANQIVHPAQASMDTIRLNGMAVKNVRNRGQRKSSSWTSNCNNCEGQSSKPQAEKGLSTMNRPIDFNKLKPCASLPERGDIIAYRLIELS
STWTPELSSFRVGKVLWCKPEANKIMTIPVPEYPFVYKKAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEEAAGNIREASGAKQSWNKWENHSTTPKQSWNK
WGENHPKPPKQSWKKWKDSTSVRGNVKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHDP

Cmc03g0086341 (gene) of Melon (Charmono) v1.1 genome