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Cmc04g0087261 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0087261
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGolgin subfamily A member 6-like protein 4, putative
Genome locationCMiso1.1chr04:225867..229318
RNA-Seq ExpressionCmc04g0087261
SyntenyCmc04g0087261
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148363.1 uncharacterized protein LOC101210706 [Cucumis sativus]2.3e-5987.5Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLLQFGRRALFY+RVLSGYEERRIRS R  LDKRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNK LEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKVTN-TLQTEKNQQTQNLASDTTPQKT
        GEER+M+DMVKVMQQQAL ++AEAGKVT+  LQTEKNQQTQNLASDTTPQKT
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKVTN-TLQTEKNQQTQNLASDTTPQKT
XP_008465889.1 PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo]1.5e-69100Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT
        GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT
XP_022131261.1 uncharacterized protein LOC111004517 [Momordica charantia]6.1e-6088.16Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL L+KRLKQAEE+KAA+RK+PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKEAEALMK+QLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKV-TNTLQTEKNQQTQNLASDTTPQKT
        GEER MKDMVKVMQQQALF++AEAGKV T+TLQT+KNQ  QNLASD TPQKT
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKV-TNTLQTEKNQQTQNLASDTTPQKT
XP_023532534.1 uncharacterized protein LOC111794666 [Cucurbita pepo subsp. pepo]8.0e-5281.56Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MD++L+FGRRALFY++VLSGYEERRIRSFRL L+KRLK+AEERKAAIR++PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKE EALM++QLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQN
        GEER+MK+MVKVMQQQAL ++ EA KV +TLQT+KNQQ Q+
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQN
XP_038886906.1 uncharacterized protein LOC120077104 [Benincasa hispida]2.4e-6492.72Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL L+KRLKQAEERKAAIRK+PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKEAEALMKIQLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT
        GEER+MKDMVKVMQQQALF++AEAGKVT+TLQT+KNQQTQNLASDTTPQKT
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT
TrEMBL top hitse value%identityAlignment
A0A0A0LKE0 Uncharacterized protein1.1e-5987.5Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLLQFGRRALFY+RVLSGYEERRIRS R  LDKRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNK LEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKVTN-TLQTEKNQQTQNLASDTTPQKT
        GEER+M+DMVKVMQQQAL ++AEAGKVT+  LQTEKNQQTQNLASDTTPQKT
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKVTN-TLQTEKNQQTQNLASDTTPQKT
A0A1S3CPZ1 uncharacterized protein LOC1035034737.0e-70100Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT
        GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT
A0A6J1BQI2 uncharacterized protein LOC1110045173.0e-6088.16Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDKLL+FGRRALFY+RVLSGYEERRIRSFRL L+KRLKQAEE+KAA+RK+PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKEAEALMK+QLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKV-TNTLQTEKNQQTQNLASDTTPQKT
        GEER MKDMVKVMQQQALF++AEAGKV T+TLQT+KNQ  QNLASD TPQKT
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKV-TNTLQTEKNQQTQNLASDTTPQKT
A0A6J1H1D7 uncharacterized protein LOC1114595452.5e-5180.85Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDK+L+FGRRALFY++VLSGYEERRIRS RL L+KRLK+AEERKAAIR++PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKE EALM++QLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQN
        GEER+MK+MVKV+QQQAL ++ EA KV +TLQT+KNQQ Q+
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQN
A0A6J1K1F5 uncharacterized protein LOC1114915408.6e-5281.56Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        MDK+L+ GRRALFY++VLSGYEERRIRSFRL L+KRLK+AEERKAAIRK+PEQAILGEVRRMVEEMQTLNK LEETESAIEEYFKPIDKE E LM++QLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQN
        GEER+MK+MVKVMQQQAL ++ EA KV +TLQT+KNQQ Q+
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKVTNTLQTEKNQQTQN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G17010.1 unknown protein1.1e-3551.88Show/hide
Query:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE
        M+KLL++GR+A+FY+RVLSGYEERRIRS+RL L+KR++QA +RK  I ++PEQ +L EVRRMVEEMQ LNK +E TE+ IE+YFKPIDK A  +M+IQLE
Subjt:  MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLE

Query:  GEERSMKDMVKVMQQQALFKQAEAGKV----------TNTLQTEKNQQTQNLASDTTPQK
        GE+++M  M+   QQ+A+ K  EA K+          T+    +K Q +++ A++ +  K
Subjt:  GEERSMKDMVKVMQQQALFKQAEAGKV----------TNTLQTEKNQQTQNLASDTTPQK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGCTTTTGCAGTTTGGTCGGAGAGCCCTCTTCTACATTAGGGTCCTCTCTGGCTATGAAGAGCGGCGGATTCGATCGTTTAGATTGGGGCTTGATAAGCGTCT
CAAACAGGCGGAGGAAAGAAAAGCTGCCATAAGAAAGATGCCAGAACAGGCCATCTTAGGTGAAGTTCGTCGTATGGTTGAGGAGATGCAAACTCTAAATAAAACTTTAG
AGGAAACAGAATCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTGATGAAAATACAACTTGAAGGAGAAGAGAGAAGTATGAAGGACATGGTT
AAAGTTATGCAGCAACAGGCTTTGTTTAAACAAGCTGAGGCAGGTAAGGTTACAAATACTCTACAAACTGAAAAAAATCAACAAACTCAAAACCTTGCATCTGACACAAC
CCCTCAAAAAACTTAG
mRNA sequenceShow/hide mRNA sequence
GTGGACATTCCTAACAACAAATTAAAATTTTCTTCCAAAGTATAACTATTAAACACACATTCAAAAGAGGGACTATTTCGTAATTTACCTAAAAAAATTCTGTAGAGATG
CATAGCAAAATCTTCATAAGCCATATATAAGTTTCGAAGTAAATCCACCGCGAGAAGGGGGGAAGAACACACAGCCTCTTCGCAGTACTTTGTTCGCTCCAAATGGATTA
ATGATTTCTTCTGGGAGATCAGCTTGAGGGATTCGGATGGACAAGCTTTTGCAGTTTGGTCGGAGAGCCCTCTTCTACATTAGGGTCCTCTCTGGCTATGAAGAGCGGCG
GATTCGATCGTTTAGATTGGGGCTTGATAAGCGTCTCAAACAGGCGGAGGAAAGAAAAGCTGCCATAAGAAAGATGCCAGAACAGGCCATCTTAGGTGAAGTTCGTCGTA
TGGTTGAGGAGATGCAAACTCTAAATAAAACTTTAGAGGAAACAGAATCTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGGCATTGATGAAAATACAA
CTTGAAGGAGAAGAGAGAAGTATGAAGGACATGGTTAAAGTTATGCAGCAACAGGCTTTGTTTAAACAAGCTGAGGCAGGTAAGGTTACAAATACTCTACAAACTGAAAA
AAATCAACAAACTCAAAACCTTGCATCTGACACAACCCCTCAAAAAACTTAGCTGAGTTAATAATTCTACGAGAAGTTAGAGATTAGATTAATAAGTCTGTTACTGTGCA
ATTTTGGTGCCACCATTGTCTCAAGACTACACCTCTCCATAGTTGTTGTGATTATAAAGCCCCTTAGATTTAATTACAGAGGCATTATTGATTATTTCTAGTTTGTTATA
TGAATAATTTTTCTTACCCAATTCAGATGTATGGATTTGTGATTGCCAACCTCAAGTTTGAAACAGTTTTTTCTCACTTTTGTCTGAGTTTTGGCACGAAACTATTACCG
ATTACATT
Protein sequenceShow/hide protein sequence
MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVRRMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLEGEERSMKDMV
KVMQQQALFKQAEAGKVTNTLQTEKNQQTQNLASDTTPQKT