CuGenDBv2

Gene ID	Cmc04g0087581
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	MSC domain-containing protein
Genome location	CMiso1.1chr04:523715..530866
RNA-Seq Expression	Cmc04g0087581
Synteny	Cmc04g0087581
Gene Ontology terms	GO:0005637 - nuclear inner membrane (cellular component) GO:0003682 - chromatin binding (molecular function)
InterPro domains	IPR018996 - Man1/Src1, C-terminal IPR041885 - MAN1, winged-helix domain IPR044780 - Heh2/Src1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0038534.1 MSC domain-containing protein [Cucumis melo var. makuwa]

1.4e-228

100

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
        GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIEN
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIEN
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIEN

XP_004148518.1 uncharacterized protein LOC101208017 isoform X1 [Cucumis sativus]

8.8e-223

95.3

Show/hide

Query:  MSSTPKKRTKVKRNPNSDV----GSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSD
        MSSTPKKRTKVKRNPNSDV    GSGVDSSVSSSSLLLKS+KEPPRDFFPSKDDLAALITVLIIA  VFVSCNFFVSRLSSRHP+PFCDTDADS D +SD
Subjt:  MSSTPKKRTKVKRNPNSDV----GSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSD

Query:  VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKAL
        VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKAL
Subjt:  VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKAL

Query:  ETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCE
        ETIGGLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYNQVCEILEENALTSTRNS QCE
Subjt:  ETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCE

Query:  SWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPK
        SWVVASRLRDHLLLPRER+NPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSS KKKLASKSNSASKSNFWKAIGVNPDPMYHKIEN+PK
Subjt:  SWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPK

Query:  PVVL
         VVL
Subjt:  PVVL

XP_008465929.1 PREDICTED: uncharacterized protein LOC103503505 isoform X1 [Cucumis melo]

4.8e-205

99.72

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
        GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ E
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE

XP_008465930.1 PREDICTED: uncharacterized protein LOC103503505 isoform X3 [Cucumis melo]

6.0e-232

99.75

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
        GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPKPVVL
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIEND KPVVL
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPKPVVL

XP_038888162.1 uncharacterized protein LOC120078048 [Benincasa hispida]

2.2e-205

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        MSSTPKKRTKVKRN NSDVGS  DSSVSSS++LLKS+KEPPRDFFPSKDDLAALITVL IA L+FVSC+FFVSRL+SR P PFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CPRHGECRDGKL+CLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKE+DIWDDLDGKELVESIGSDNTTL YAKSKALETIG
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
        GL QTRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAF VLPVFLLLVGCTWLLWKLYRRQ +TNRAEDLYNQVCEILEENAL STRNS QCESWVV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPKPVVL
        ASRLRDHLLLPRERKNPLLW+KVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSK+K+LA+KSNS       KA+GV+ D M+ K+EN+PKP+VL
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPKPVVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LI89 MSC domain-containing protein

4.2e-223

95.3

Show/hide

Query:  MSSTPKKRTKVKRNPNSDV----GSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSD
        MSSTPKKRTKVKRNPNSDV    GSGVDSSVSSSSLLLKS+KEPPRDFFPSKDDLAALITVLIIA  VFVSCNFFVSRLSSRHP+PFCDTDADS D +SD
Subjt:  MSSTPKKRTKVKRNPNSDV----GSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSD

Query:  VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKAL
        VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCE+NAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKAL
Subjt:  VCEPCPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKAL

Query:  ETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCE
        ETIGGLLQTRQNS GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQ LTNRAEDLYNQVCEILEENALTSTRNS QCE
Subjt:  ETIGGLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCE

Query:  SWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPK
        SWVVASRLRDHLLLPRER+NPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSS KKKLASKSNSASKSNFWKAIGVNPDPMYHKIEN+PK
Subjt:  SWVVASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPK

Query:  PVVL
         VVL
Subjt:  PVVL

A0A1S3CQ15 uncharacterized protein LOC103503505 isoform X3

2.9e-232

99.75

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
        GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPKPVVL
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIEND KPVVL
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPKPVVL

A0A1S3CRG1 uncharacterized protein LOC103503505 isoform X1

2.3e-205

99.72

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
        GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ E
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVE

A0A1S4E5Q9 uncharacterized protein LOC103503505 isoform X4

5.2e-205

100

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
        GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQ

A0A5A7T509 MSC domain-containing protein

6.8e-229

100

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
        GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVV

Query:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIEN
        ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIEN
Subjt:  ASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIEN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G46560.1 CONTAINS InterPro DOMAIN/s: Inner nuclear membrane protein MAN1 (InterPro:IPR018996); Has 58 Blast hits to 58 proteins in 29 species: Archae - 0; Bacteria - 4; Metazoa - 11; Fungi - 15; Plants - 20; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).

1.1e-95

47.2

Show/hide

Query:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP
        M S P+KR      P S+  +G     SSSS  ++SM EPP+  FPSK +   L+ VL++A  V  +CNF    LSS     FCD++ + +D   D+CEP
Subjt:  MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEP

Query:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG
        CP +GEC  GKL+C  GY+    LC+EDG INE+  KL  + E  +CES A   C G G +WV END+W +L     + ++  D +   + K KA+E + 
Subjt:  CPRHGECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIG

Query:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTS-TRNSDQCESWV
         LL+ R NS GI ELKCP+ +A+SYKP TCR+  W+L+H  ++     +LVG   L  ++ R+Q  + R E+LY+QVC+ LEENA+ S +  +  CE WV
Subjt:  GLLQTRQNSFGIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTS-TRNSDQCESWV

Query:  VASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKS
        +AS LRD+LLLPRER++PLLW KVEEL++EDSRIDRY +L+KG+ K VWEWQVEGSLS SK KK         KS
Subjt:  VASRLRDHLLLPRERKNPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKS

Sequences

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CDS sequence

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ATGTCTTCAACTCCGAAGAAGCGAACCAAAGTCAAGCGTAATCCTAATTCCGATGTCGGTTCTGGCGTCGATTCCTCTGTTTCATCTTCTTCGTTGTTGCTGAAG
TCTATGAAGGAACCGCCTCGCGATTTCTTTCCCTCGAAGGATGATCTTGCTGCGCTGATTACTGTACTTATCATCGCCAGCTTGGTTTTTGTGAGCTGTAACTTC
TTCGTATCTAGACTTTCAAGTCGCCATCCGGTCCCTTTTTGTGATACCGACGCTGATTCTTTGGATTTGCTTTCTGATGTTTGTGAGCCTTGTCCAAGGCATGGA
GAATGCCGTGATGGTAAGTTGGAATGCCTTCATGGTTATAGAAAGCATGGAAGGTTGTGTATAGAAGATGGAGTAATCAATGAAGCAGTTAATAAACTTTCAGAA
TGGCTAGAATCTCACCTCTGTGAATCTAATGCTAAGTTCTTATGCGATGGAATTGGGATAGTTTGGGTTAAAGAGAATGATATATGGGATGATCTAGATGGTAAA
GAGCTGGTGGAAAGTATTGGCTCTGACAACACTACCCTTATGTATGCAAAGAGCAAGGCGTTGGAAACTATTGGTGGGTTACTTCAGACACGACAAAATTCTTTT
GGGATCAAGGAATTGAAATGCCCAGATCTGCTAGCTGAAAGTTACAAGCCTTTTACTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTTTGCCA
GTTTTCTTACTGCTTGTGGGATGCACATGGTTACTGTGGAAACTTTACCGAAGACAAAACCTAACAAATAGAGCTGAAGATCTGTACAACCAGGTTTGCGAAATA
CTTGAGGAAAATGCTTTAACATCAACTAGAAACAGCGATCAATGTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAG
AATCCTTTGTTATGGAAGAAGGTAGAGGAGTTGGTTCAGGAAGACTCACGAATAGATCGTTACCCAAGACTAGTTAAGGGTGATGGAAAAGAAGTATGGGAATGG
CAAGTGGAAGGCTCTTTGAGCTCGTCAAAGAAAAAGAAACTGGCCAGCAAATCCAATTCCGCCAGCAAATCCAATTTCTGGAAGGCAATAGGAGTAAATCCTGAC
CCAATGTATCATAAAATAGAAAACGACCCAAAGCCAGTAGTTTTGTGA

mRNA sequence

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TCACATATAACCATTCGAAAACCAAAAGCAAAGGAAAGACGACTGCTCTGCTGGGGAGAGAAAGCAGCCTGAAGAACTAACTACGTTGATCGATGTCTTCAACTC
CGAAGAAGCGAACCAAAGTCAAGCGTAATCCTAATTCCGATGTCGGTTCTGGCGTCGATTCCTCTGTTTCATCTTCTTCGTTGTTGCTGAAGTCTATGAAGGAAC
CGCCTCGCGATTTCTTTCCCTCGAAGGATGATCTTGCTGCGCTGATTACTGTACTTATCATCGCCAGCTTGGTTTTTGTGAGCTGTAACTTCTTCGTATCTAGAC
TTTCAAGTCGCCATCCGGTCCCTTTTTGTGATACCGACGCTGATTCTTTGGATTTGCTTTCTGATGTTTGTGAGCCTTGTCCAAGGCATGGAGAATGCCGTGATG
GTAAGTTGGAATGCCTTCATGGTTATAGAAAGCATGGAAGGTTGTGTATAGAAGATGGAGTAATCAATGAAGCAGTTAATAAACTTTCAGAATGGCTAGAATCTC
ACCTCTGTGAATCTAATGCTAAGTTCTTATGCGATGGAATTGGGATAGTTTGGGTTAAAGAGAATGATATATGGGATGATCTAGATGGTAAAGAGCTGGTGGAAA
GTATTGGCTCTGACAACACTACCCTTATGTATGCAAAGAGCAAGGCGTTGGAAACTATTGGTGGGTTACTTCAGACACGACAAAATTCTTTTGGGATCAAGGAAT
TGAAATGCCCAGATCTGCTAGCTGAAAGTTACAAGCCTTTTACTTGCCGTATTCGTCACTGGGTTTTGCAGCATGCTTTTGTTGTTTTGCCAGTTTTCTTACTGC
TTGTGGGATGCACATGGTTACTGTGGAAACTTTACCGAAGACAAAACCTAACAAATAGAGCTGAAGATCTGTACAACCAGGTTTGCGAAATACTTGAGGAAAATG
CTTTAACATCAACTAGAAACAGCGATCAATGTGAATCATGGGTTGTTGCTTCTAGGTTACGTGACCATCTTCTTTTGCCACGAGAGAGGAAGAATCCTTTGTTAT
GGAAGAAGGTAGAGGAGTTGGTTCAGGAAGACTCACGAATAGATCGTTACCCAAGACTAGTTAAGGGTGATGGAAAAGAAGTATGGGAATGGCAAGTGGAAGGCT
CTTTGAGCTCGTCAAAGAAAAAGAAACTGGCCAGCAAATCCAATTCCGCCAGCAAATCCAATTTCTGGAAGGCAATAGGAGTAAATCCTGACCCAATGTATCATA
AAATAGAAAACGACCCAAAGCCAGTAGTTTTGTGACATGGCGCTTTCGGGTACAAGTTAAGAAATGGAATAGAAGCTTAATAGGAAAAAGAATCATCAGAACAGA
AGAGTTTGAGAAGAAAGATGACAAAGTGATCTATAACCGAACACTGTTGCCAAAGATACGCTCACCTGCCTGTGATCTTTCGTGGGCCCCATTCTCTTCCTCTTT
GTGGCAGACAACTTTACTATGTCGTCGCGCTGGACCAATCCAAACTTGCCTTCATGTACCTCCCGGTCATCTTATCCAATGGCTTTTCACCTTATTATCTCTACT
TTTCTTTACAAACAAAAATTATGATTCATTTCCAACAATTATATATAAGAACTAGAAATTGAATTAATGTATTTTTTTTCTTAGAAATTTCCTTCA

Protein sequence

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MSSTPKKRTKVKRNPNSDVGSGVDSSVSSSSLLLKSMKEPPRDFFPSKDDLAALITVLIIASLVFVSCNFFVSRLSSRHPVPFCDTDADSLDLLSDVCEPCPRHG
ECRDGKLECLHGYRKHGRLCIEDGVINEAVNKLSEWLESHLCESNAKFLCDGIGIVWVKENDIWDDLDGKELVESIGSDNTTLMYAKSKALETIGGLLQTRQNSF
GIKELKCPDLLAESYKPFTCRIRHWVLQHAFVVLPVFLLLVGCTWLLWKLYRRQNLTNRAEDLYNQVCEILEENALTSTRNSDQCESWVVASRLRDHLLLPRERK
NPLLWKKVEELVQEDSRIDRYPRLVKGDGKEVWEWQVEGSLSSSKKKKLASKSNSASKSNFWKAIGVNPDPMYHKIENDPKPVVL

Cmc04g0087581 (gene) of Melon (Charmono) v1.1 genome