; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0089211 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0089211
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCMiso1.1chr04:1616334..1617062
RNA-Seq ExpressionCmc04g0089211
SyntenyCmc04g0089211
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]1.5e-11691.53Show/hide
Query:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQEL ILNDQLFK P+I MDTEF GFLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        IQYLKN K FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTVNDLKHMI NCE+LMNGELGL
Subjt:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW
        KRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW

KAE8649090.1 hypothetical protein Csa_014788 [Cucumis sativus]2.1e-11087.88Show/hide
Query:  FVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQ
        FVRQVWYHNL QELAILND LFK P+IVMDTEF GFLRSTPRGAP+EHLYQDLKFN+NHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQ

Query:  YLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKR
        YLKNNK FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFA IAQR LGTVNDLK+MI +CE LM GELGLKR
Subjt:  YLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKR

Query:  LAELLNVNDTIFNGGSDSLLIALAYVKMKKM
        LAELL+VNDT+F+GGSDSLLIALAYVKMKK+
Subjt:  LAELLNVNDTIFNGGSDSLLIALAYVKMKKM

XP_004151393.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]2.1e-11087.88Show/hide
Query:  FVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQ
        FVRQVWYHNL QELAILND LFK P+IVMDTEF GFLRSTPRGAP+EHLYQDLKFN+NHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTD SSPTS+Q
Subjt:  FVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQ

Query:  YLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKR
        YLKNNK FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM+I+ MPESMVEFA IAQR LGTVNDLK+MI +CE LM GELGLKR
Subjt:  YLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKR

Query:  LAELLNVNDTIFNGGSDSLLIALAYVKMKKM
        LAELL+VNDT+F+GGSDSLLIALAYVKMKK+
Subjt:  LAELLNVNDTIFNGGSDSLLIALAYVKMKKM

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]1.5e-11691.1Show/hide
Query:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QELAILNDQLFK P+I MDTEF GFLRSTPRGAPEEH YQDLKFNLNHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        IQYLKN K FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTVNDLKHMI NCE+LMNGELGL
Subjt:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW
        KRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW

XP_008466654.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]1.1e-135100Show/hide
Query:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
Subjt:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR
        KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR

TrEMBL top hitse value%identityAlignment
A0A1S3BY95 Poly(A)-specific ribonuclease7.2e-11791.1Show/hide
Query:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QELAILNDQLFK P+I MDTEF GFLRSTPRGAPEEH YQDLKFNLNHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        IQYLKN K FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTVNDLKHMI NCE+LMNGELGL
Subjt:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW
        KRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW

A0A1S3CRS2 putative CCR4-associated factor 1 homolog 85.3e-136100Show/hide
Query:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
Subjt:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR
        KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR

A0A5A7T5A7 Putative CCR4-associated factor 1-like protein 85.3e-136100Show/hide
Query:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
Subjt:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR
        KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKWLWRMRR

A0A5A7TN62 Poly(A)-specific ribonuclease7.2e-11791.53Show/hide
Query:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVRQVWYHNLTQEL ILNDQLFK P+I MDTEF GFLRST RGAPEEH YQDLKFNLNHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        IQYLKN K FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTVNDLKHMI NCE+LMNGELGL
Subjt:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW
        KRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW

A0A5D3D333 Poly(A)-specific ribonuclease7.2e-11791.1Show/hide
Query:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS
        MSFVR+VWYHN  QELAILNDQLFK P+I MDTEF GFLRSTPRGAPEEH YQDLKFNLNHLKILQLGLTLMD+NEHVGLSWVFTFSDFDEQTDFSSPTS
Subjt:  MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTS

Query:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        IQYLKN K FEFKK RK  IPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFA IAQR LGTVNDLKHMI NCE+LMNGELGL
Subjt:  IQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW
        KRLAELLNVNDTIFNGGSDSLLIALAY KMKK LK+
Subjt:  KRLAELLNVNDTIFNGGSDSLLIALAYVKMKKMLKW

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 53.0e-2736.24Show/hide
Query:  QVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLK
        +VW  N   E+  + D L     I +DTEF G L+ TP  A +E  Y+D+KFN+++  ++QLGLTL  K   +  +W    SDF+E     +  SI +LK
Subjt:  QVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLK

Query:  NNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNR-ITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGT-VNDLKHMICNCEHLMNGELGLKRL
        NN   +  K R+  I   EF   F  I +      +W+TF G YD AYLLK +  + +PE+  EF    Q+ LG  V D+K M   C  L +   GL+R+
Subjt:  NNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNR-ITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGT-VNDLKHMICNCEHLMNGELGLKRL

Query:  AELLNVN--DTIFNGGSDSLLIALAYVKM
        A++L +       + GSDS L A  + K+
Subjt:  AELLNVN--DTIFNGGSDSLLIALAYVKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 88.7e-2735.78Show/hide
Query:  LAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKH
        ++++ D L     I +DTEF   LR T + A +E  Y D+ F+++  K++QLGLTL D N  +G +W   FSDF    D  +  SI++L+ N   + +K 
Subjt:  LAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWFEFKKH

Query:  RKYRIP-SAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVN--DT
        R+  I     F   F  +  + R   W+TFHG YD+AYLLK      +P +   F+    R LG+V DLK M   CE L +  LGL+ LA    +N   T
Subjt:  RKYRIP-SAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVN--DT

Query:  IFNGGSDSLLIALAYVKM
          + GS++ L A+ + K+
Subjt:  IFNGGSDSLLIALAYVKM

Q9S9P2 Probable CCR4-associated factor 1 homolog 28.7e-2731.85Show/hide
Query:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSD
        +R+VW HNL QE+A++   +   P + MDTEF G +  T    P         E+ Y  LK N+N LK++QLGLTL D+  ++          W F F +
Subjt:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSD

Query:  FDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHM
        F+  +D  +  SI+ L+ +   + +K+ +  + +  F    +   +  +++I  W+TFH  YD  YLLKL+  + +PE + +F    ++    V D+K++
Subjt:  FDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHM

Query:  ICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK
        +  C +L     GL+++AELL V         GSDSLL    ++KMK+
Subjt:  ICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK

Q9SHJ0 Probable CCR4-associated factor 1 homolog 16.7e-2732.62Show/hide
Query:  RQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYL
        R+VW  N+ +E+A + + L + P+I  DTE+ G +  T   +  +  Y+ +K N+ + K++Q G TL +    +G  W   FS+F + +D  +  SI++L
Subjt:  RQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYL

Query:  KNNKWFEFKKHRKYRIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        + +   + +K R   +    F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFAT   +  G V D K M   CE L    LGL
Subjt:  KNNKWFEFKKHRKYRIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVN--DTIFNGGSDSLLIALAYVKMK
         +LA+LL +       + GSDSL+ AL ++K+K
Subjt:  KRLAELLNVN--DTIFNGGSDSLLIALAYVKMK

Q9SKZ2 Probable CCR4-associated factor 1 homolog 78.7e-2732.92Show/hide
Query:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRG---APEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS--------WVFTFSDFDEQ
        +R+VW  NL  E+A++ + +   P + MDTEF G +   P G      E+ Y+ LK N+N LK++QLGLT  D+  ++           W F F +FD +
Subjt:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRG---APEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS--------WVFTFSDFDEQ

Query:  TDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCE
        +D  +  SI+ L+ +   +F K+ ++ I S  F    +      N    W+TFH  YD  YLLKL+  + +PE+   F  +       V D+KH++  C 
Subjt:  TDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCE

Query:  HLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK
         L     GL +LAELL+V         GSDSLL +  + K+++
Subjt:  HLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.7e-2832.62Show/hide
Query:  RQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYL
        R+VW  N+ +E+A + + L + P+I  DTE+ G +  T   +  +  Y+ +K N+ + K++Q G TL +    +G  W   FS+F + +D  +  SI++L
Subjt:  RQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYL

Query:  KNNKWFEFKKHRKYRIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL
        + +   + +K R   +    F   F P    +F S +  +++TF G YD AY L ++    +PE+  EFAT   +  G V D K M   CE L    LGL
Subjt:  KNNKWFEFKKHRKYRIPSAEFRRAFLP----IFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGL

Query:  KRLAELLNVN--DTIFNGGSDSLLIALAYVKMK
         +LA+LL +       + GSDSL+ AL ++K+K
Subjt:  KRLAELLNVN--DTIFNGGSDSLLIALAYVKMK

AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.2e-2831.85Show/hide
Query:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSD
        +R+VW HNL QE+A++   +   P + MDTEF G +  T    P         E+ Y  LK N+N LK++QLGLTL D+  ++          W F F +
Subjt:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSD

Query:  FDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHM
        F+  +D  +  SI+ L+ +   + +K+ +  + +  F    +   +  +++I  W+TFH  YD  YLLKL+  + +PE + +F    ++    V D+K++
Subjt:  FDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHM

Query:  ICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK
        +  C +L     GL+++AELL V         GSDSLL    ++KMK+
Subjt:  ICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.2e-2831.85Show/hide
Query:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSD
        +R+VW HNL QE+A++   +   P + MDTEF G +  T    P         E+ Y  LK N+N LK++QLGLTL D+  ++          W F F +
Subjt:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPE--------EHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS-------WVFTFSD

Query:  FDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHM
        F+  +D  +  SI+ L+ +   + +K+ +  + +  F    +   +  +++I  W+TFH  YD  YLLKL+  + +PE + +F    ++    V D+K++
Subjt:  FDEQTDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFL--PIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHM

Query:  ICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK
        +  C +L     GL+++AELL V         GSDSLL    ++KMK+
Subjt:  ICNCEHLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-2836.24Show/hide
Query:  QVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLK
        +VW  N   E+  + D L     I +DTEF G L+ TP  A +E  Y+D+KFN+++  ++QLGLTL  K   +  +W    SDF+E     +  SI +LK
Subjt:  QVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLK

Query:  NNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNR-ITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGT-VNDLKHMICNCEHLMNGELGLKRL
        NN   +  K R+  I   EF   F  I +      +W+TF G YD AYLLK +  + +PE+  EF    Q+ LG  V D+K M   C  L +   GL+R+
Subjt:  NNKWFEFKKHRKYRIPSAEFRRAFLPIFSSNR-ITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGT-VNDLKHMICNCEHLMNGELGLKRL

Query:  AELLNVN--DTIFNGGSDSLLIALAYVKM
        A++L +       + GSDS L A  + K+
Subjt:  AELLNVN--DTIFNGGSDSLLIALAYVKM

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.2e-2832.92Show/hide
Query:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRG---APEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS--------WVFTFSDFDEQ
        +R+VW  NL  E+A++ + +   P + MDTEF G +   P G      E+ Y+ LK N+N LK++QLGLT  D+  ++           W F F +FD +
Subjt:  VRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRG---APEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLS--------WVFTFSDFDEQ

Query:  TDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCE
        +D  +  SI+ L+ +   +F K+ ++ I S  F    +      N    W+TFH  YD  YLLKL+  + +PE+   F  +       V D+KH++  C 
Subjt:  TDFSSPTSIQYLKNNKWFEFKKHRKYRIPSAEFRRAFLPI-FSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCE

Query:  HLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK
         L     GL +LAELL+V         GSDSLL +  + K+++
Subjt:  HLMNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYVKMKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTCACCCAAGAATTGGCCATTCTCAACGACCAACTTTTCAAGTTGCCAATGATCGTGATGGACACTGAGTTCCTTGG
CTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATA
AGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACATCAATCCAATATTTGAAGAACAACAAATGGTTT
GAATTCAAGAAACATAGGAAATACAGAATTCCATCGGCTGAATTTCGACGTGCATTTTTGCCGATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTCCATGGCAT
TTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGCCAGAGTCCATGGTGGAATTTGCCACCATAGCTCAACGTCAGCTTGGTACAGTGAACGACCTCA
AGCACATGATTTGCAATTGTGAACACTTAATGAACGGTGAACTGGGACTTAAGAGACTTGCTGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGT
TTGCTGATAGCTTTGGCGTATGTGAAGATGAAGAAGATGCTCAAGTGGCTTTGGCGTATGCGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCGTTCGACAAGTTTGGTATCATAATCTCACCCAAGAATTGGCCATTCTCAACGACCAACTTTTCAAGTTGCCAATGATCGTGATGGACACTGAGTTCCTTGG
CTTTCTCCGATCAACTCCGAGAGGTGCTCCCGAGGAACATCTCTACCAAGATTTGAAGTTCAATCTAAACCATTTGAAAATTCTTCAACTGGGTCTCACTCTGATGGATA
AGAACGAGCATGTTGGGTTGTCTTGGGTGTTCACCTTTTCTGATTTTGATGAACAAACAGACTTCTCTAGTCCTACATCAATCCAATATTTGAAGAACAACAAATGGTTT
GAATTCAAGAAACATAGGAAATACAGAATTCCATCGGCTGAATTTCGACGTGCATTTTTGCCGATCTTTTCTAGCAATCGAATAACCAAATGGATCACATTCCATGGCAT
TTACGATGTTGCTTATTTGTTGAAGCTAATGATGATCAGAACCATGCCAGAGTCCATGGTGGAATTTGCCACCATAGCTCAACGTCAGCTTGGTACAGTGAACGACCTCA
AGCACATGATTTGCAATTGTGAACACTTAATGAACGGTGAACTGGGACTTAAGAGACTTGCTGAGTTACTCAATGTGAACGACACTATTTTCAACGGTGGTTCTGATAGT
TTGCTGATAGCTTTGGCGTATGTGAAGATGAAGAAGATGCTCAAGTGGCTTTGGCGTATGCGAAGATGA
Protein sequenceShow/hide protein sequence
MSFVRQVWYHNLTQELAILNDQLFKLPMIVMDTEFLGFLRSTPRGAPEEHLYQDLKFNLNHLKILQLGLTLMDKNEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNNKWF
EFKKHRKYRIPSAEFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLMMIRTMPESMVEFATIAQRQLGTVNDLKHMICNCEHLMNGELGLKRLAELLNVNDTIFNGGSDS
LLIALAYVKMKKMLKWLWRMRR