CuGenDBv2

Gene ID	Cmc04g0090611
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ribosomal RNA small subunit methyltransferase H
Genome location	CMiso1.1chr04:2720258..2725286
RNA-Seq Expression	Cmc04g0090611
Synteny	Cmc04g0090611
Gene Ontology terms	GO:0070475 - rRNA base methylation (biological process) GO:0071424 - rRNA (cytosine-N4-)-methyltransferase activity (molecular function)
InterPro domains	IPR002903 - Ribosomal RNA small subunit methyltransferase H IPR023397 - S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7037555.1 rsmH, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.5e-197

82.1

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Query:  MAFRSSIAKFSLFSSS-SQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE
        MAFRSS+ K SLFSSS SQS    +L  TC TP P IFR CSISTA+   NK KK K KK+KN+KAST V KSSES+S S KLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSIAKFSLFSSS-SQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE

Query:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
         A+  GDTAAHIPVMLAEVLDVFS+SSGRPLRSFVDCTVGAGGHSSA        IIQAHPEL FYMGMDVDPIALDKAQDRISD F EDSDLKAY VLK
Subjt:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK

Query:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ
        NFKY+KSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGF VL DGPLDMRMDPQASLKAEDILN+WPEIEVGR+LR YGEESNWYSLQNKIVKARSQ
Subjt:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ

Query:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDII-NPKTEG---DEV
        GGLH+T++L+DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDEL VL+++LY+ F+CLAPGGRLAVISFHSLEDRVVKQTFLDII NPKTEG   +EV
Subjt:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDII-NPKTEG---DEV

Query:  AKVIEEN------EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKN
         +V E+N      EEWIKQ VKGS+GR+LTKRPITPSEEEERLNRR RSAKLRVIQKN
Subjt:  AKVIEEN------EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKN

XP_008466336.1 PREDICTED: ribosomal RNA small subunit methyltransferase H [Cucumis melo]

5.0e-243

97.56

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Query:  MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN
        MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN
Subjt:  MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN

Query:  AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN
        AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSA        IIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN
Subjt:  AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN

Query:  FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG
        FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG
Subjt:  FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG

Query:  GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIE
        GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAK+I+
Subjt:  GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIE

Query:  ENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
        E EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
Subjt:  ENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC

XP_022940206.1 uncharacterized protein LOC111445901 [Cucurbita moschata]

2.4e-197

82.31

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Query:  MAFRSSIAKFSLFSSS-SQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE
        MAFRSS+ K SLFSSS SQS    +L  TC TP P IFR CSISTA+   NK KK K KK+KN+KAST V KSSES+S S KLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSIAKFSLFSSS-SQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE

Query:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
         A+  GDTAAHIPVMLAEVLDVFS+SSGRPLRSFVDCTVGAGGHSSA        IIQAHPEL FYMGMDVDPIALDKAQDRISD F EDSDLKAY VLK
Subjt:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK

Query:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ
        NFKY+KSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGF VL DGPLDMRMDPQASLKAEDILN+WPEIEVGR+LR YGEESNWYSLQNKIVKARSQ
Subjt:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ

Query:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDII-NPKTEG---DEV
        GGLH+T++L+DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDEL VL+++LY+ F+CLAPGGRLAVISFHSLEDRVVKQTFLDII NPKTEG   +EV
Subjt:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDII-NPKTEG---DEV

Query:  AKVIEEN------EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKN
         +V E+N      EEWIKQ VKGSKGR+LTKRPITPSEEEERLNRR RSAKLRVIQKN
Subjt:  AKVIEEN------EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKN

XP_031739414.1 uncharacterized protein LOC101221749 [Cucumis sativus]

9.8e-231

93.2

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Query:  MAFRSSIAKFSLF-SSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE
        MAFRSSIAKFSLF SSSSQSLHF H FFTCTTPPPRIFRFCSISTASGVKNK KKEK KKSKNLKAST VSKSSESASLSSKLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSIAKFSLF-SSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE

Query:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
        NAIPIGDTAAHIPVMLAEVLDVF+SSSGRPLRSFVDCTVGAGGHSSA        IIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
Subjt:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK

Query:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ
        NFKY+KSLLADSDEKPLDPGVDG++MDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPE EVGRILR YGEESNWYSLQNKIVKARSQ
Subjt:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ

Query:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGD----EV
        GGLHSTTQLLDLIRKST GFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGD    EV
Subjt:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGD----EV

Query:  AKVIEENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
         K++EENEEWIKQTVKG KG VLTKRPITPSEEEERLNRRSRSAKLRVIQKNIV+C
Subjt:  AKVIEENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC

XP_038896155.1 ribosomal RNA small subunit methyltransferase H [Benincasa hispida]

2.1e-212

86.84

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Query:  MAFRSSIAKFSLFS-SSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE
        MAFRSS+AKFSLFS S SQSL F H  FTCTTPP RIFR CSI+TA+ VKNK KKEK K SKNLKAST VSKSSES+SLSSKLALVKEKRRTRSTK+FDE
Subjt:  MAFRSSIAKFSLFS-SSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE

Query:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
        NAI +GDTAAHIPVMLAEVLDVFS SSGRPLRSFVDCTVGAGGHSSA        IIQAH EL FYMGMDVDPIALDKAQDRIS  FSEDSDLKAYIVLK
Subjt:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK

Query:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ
        NFKY+KSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGF VLGDGPLDMRMDPQASLKAEDILN+WPEIEVGRILR YGEESNWYSLQNKIVKARSQ
Subjt:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ

Query:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDE----V
        GGLHST +L+DLIRKST G KGGRQGWIKTATRVFQALRIAVNDELNVL+++LYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKT+GDE    +
Subjt:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDE----V

Query:  AKVIEENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
         K++EENE WIKQTV GSKG VLTKRPITPSEEEERLNRRSRSAKLRVIQK  V+C
Subjt:  AKVIEENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LDT0 Uncharacterized protein

4.8e-231

93.2

Show/hide

Query:  MAFRSSIAKFSLF-SSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE
        MAFRSSIAKFSLF SSSSQSLHF H FFTCTTPPPRIFRFCSISTASGVKNK KKEK KKSKNLKAST VSKSSESASLSSKLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSIAKFSLF-SSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE

Query:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
        NAIPIGDTAAHIPVMLAEVLDVF+SSSGRPLRSFVDCTVGAGGHSSA        IIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
Subjt:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK

Query:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ
        NFKY+KSLLADSDEKPLDPGVDG++MDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPE EVGRILR YGEESNWYSLQNKIVKARSQ
Subjt:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ

Query:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGD----EV
        GGLHSTTQLLDLIRKST GFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGD    EV
Subjt:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGD----EV

Query:  AKVIEENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
         K++EENEEWIKQTVKG KG VLTKRPITPSEEEERLNRRSRSAKLRVIQKNIV+C
Subjt:  AKVIEENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC

A0A1S3CR02 ribosomal RNA small subunit methyltransferase H

2.4e-243

97.56

Show/hide

Query:  MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN
        MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN
Subjt:  MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN

Query:  AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN
        AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSA        IIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN
Subjt:  AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN

Query:  FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG
        FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG
Subjt:  FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG

Query:  GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIE
        GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAK+I+
Subjt:  GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIE

Query:  ENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
        E EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
Subjt:  ENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC

A0A5A7T697 Ribosomal RNA small subunit methyltransferase H

2.4e-243

97.56

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Query:  MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN
        MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN
Subjt:  MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDEN

Query:  AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN
        AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSA        IIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN
Subjt:  AIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKN

Query:  FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG
        FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG
Subjt:  FKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQG

Query:  GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIE
        GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAK+I+
Subjt:  GLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIE

Query:  ENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
        E EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC
Subjt:  ENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKNIVLC

A0A6J1FNN0 uncharacterized protein LOC111445901

1.2e-197

82.31

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Query:  MAFRSSIAKFSLFSSS-SQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE
        MAFRSS+ K SLFSSS SQS    +L  TC TP P IFR CSISTA+   NK KK K KK+KN+KAST V KSSES+S S KLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSIAKFSLFSSS-SQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE

Query:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
         A+  GDTAAHIPVMLAEVLDVFS+SSGRPLRSFVDCTVGAGGHSSA        IIQAHPEL FYMGMDVDPIALDKAQDRISD F EDSDLKAY VLK
Subjt:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK

Query:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ
        NFKY+KSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGF VL DGPLDMRMDPQASLKAEDILN+WPEIEVGR+LR YGEESNWYSLQNKIVKARSQ
Subjt:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ

Query:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDII-NPKTEG---DEV
        GGLH+T++L+DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDEL VL+++LY+ F+CLAPGGRLAVISFHSLEDRVVKQTFLDII NPKTEG   +EV
Subjt:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDII-NPKTEG---DEV

Query:  AKVIEEN------EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKN
         +V E+N      EEWIKQ VKGSKGR+LTKRPITPSEEEERLNRR RSAKLRVIQKN
Subjt:  AKVIEEN------EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKN

A0A6J1IWR1 uncharacterized protein LOC111481293

4.7e-194

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Query:  MAFRSSIAKFSLFSSS-SQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE
        MAFRSS+ K SLFSSS SQS    +L  TC TP P IFR CSISTA+  K K KK K KK+KN+KAST V KSSES+S S KLALVKEKRRTRSTKEFDE
Subjt:  MAFRSSIAKFSLFSSS-SQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDE

Query:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK
         A+  GDTAAHIPVMLAEVLDVFS+SSGR LRSFVDCTVGAGGHSSA        IIQAH EL FYMGMDVDPIALDKAQDRISD F EDSDLK Y VLK
Subjt:  NAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK

Query:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ
        NFKY+K LLADSDEKPL+PGVDGILMDLGMSSMQVDDPERGF VL DGPLDMRMDPQASLKAEDILN+WPE+EVGR+LR YGEESNWYSLQNKIVKARSQ
Subjt:  NFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQ

Query:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIIN-PKTEG---DEV
        GGLH+T++L+DLIRKSTPG KGGRQGWIKTATRVFQALRIAVNDEL VL++SLY+ F+CLAPGGRLAVISFHSLEDRVVKQTFLDIIN PKTEG   +EV
Subjt:  GGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIIN-PKTEG---DEV

Query:  AKVIEEN------EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKN
         +V ++N      EEWIKQTVKGSKGR+LTKRPITPSEEEERLNRR RSAKLRVIQKN
Subjt:  AKVIEEN------EEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQKN

SwissProt top hits

e value

%identity

Alignment

B0TGB2 Ribosomal RNA small subunit methyltransferase H

2.8e-55

41.25

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Query:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLA
        HIPV+L +VL+V      RP   ++D TVG GGHS+A        I+Q        +G+D DP AL  A  +++ F       +  +V  NF+++ +++A
Subjt:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLA

Query:  DSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLL
           E  L   +DGIL+D+G+SS Q+D+ ERGF    D PLDMRM+P+++L A  +LN  PE E+ RILRDYGEE     +   IVK R+   L  T +L+
Subjt:  DSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLL

Query:  DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIKQT
        D+IR + P     RQ     A R FQALRIAVNDEL  L+ +L    + LAPGGRLAVISFHSLEDR+VK  F          ++    +   +  +   
Subjt:  DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIKQT

Query:  VKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK
            K +++TK+P+  S+EE R N R++SAKLR  +K
Subjt:  VKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK

C6D563 Ribosomal RNA small subunit methyltransferase H

2.4e-54

39.53

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Query:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLA
        HI V+L E +D  +    +P   +VDCT+G  GHS        + I+         +  D D  ALD A+ R++ +       +  +V  NF+YL+ +L 
Subjt:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLA

Query:  DSDEKPLD--PGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQ
          D   +D  P VDGIL DLG+SS Q+D+ ERGF    D PLDMRMD   +L A DI+N+W E E+ RIL  YGEE    S+  KIV+AR    + +T +
Subjt:  DSDEKPLD--PGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQ

Query:  LLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIK
        L +L++   P     R+     A R FQALRIAVNDEL   +++L     C+ PGGR++VI+FHSLEDR+ KQ F   +   T   +  K +        
Subjt:  LLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIK

Query:  QTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK
              K R++ ++PI P+E+E  +N RSRSAKLRV +K
Subjt:  QTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK

Q65JY8 Ribosomal RNA small subunit methyltransferase H

5.9e-53

37.69

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Query:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLA
        H  V+L E +D  +        ++VDCT+G  GHS        + ++    E    +  D D  AL  A+++++D+     + +   +  NF+YLK  L 
Subjt:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLA

Query:  DSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLL
        +         VDG+L DLG+SS Q+D PERGF    D PLDMRMD  A L A++++N WP  ++ +I   YGEE     +  KI KAR Q  + +T QL+
Subjt:  DSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLL

Query:  DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIKQT
        D+I+++ P     R+     A R+FQA+RIAVNDEL V + +L    + L PGGR++VI+FHSLEDR+ K TF D+ +P      +  + +E E  +K  
Subjt:  DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIKQT

Query:  VKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK
               ++ ++PIT SEEE   N R+RSAKLR+ +K
Subjt:  VKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK

Q6MEG4 Ribosomal RNA small subunit methyltransferase H

1.8e-57

40.41

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Query:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK--NFKYLKSL
        H  V+L EV++ F       L+ F+D T+GAGGH+ A        I++ HPE+  Y+G+D DP AL+ A  R+  +       K  I+LK  NF      
Subjt:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLK--NFKYLKSL

Query:  LADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQ
        L +         +DG+L+DLG+SSMQ+D PERGF    DGPLDMRM+P+  L A DI+N W E ++G+I RDYGEE  W      IV+AR    + +TT 
Subjt:  LADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQ

Query:  LLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIK
        L +L++   P F    +  I   T +FQALRI VN EL+VL+  +   FD L PGGR+AVISFHSLEDR+VK       + K E   +   +  +++ + 
Subjt:  LLDLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIK

Query:  QTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK
                +++ ++PI P E+E + N RSRSAK R+ +K
Subjt:  QTVKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK

Q8GE08 Ribosomal RNA small subunit methyltransferase H (Fragment)

3.3e-56

42.14

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Query:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLA
        HIPV+L EVL+       RP   ++D TVG GGHS+A        I++        +G+D DP AL  A+ ++  F  +       +V  NF+ L S++ 
Subjt:  HIPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLA

Query:  DSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLL
        +  +K     +DGIL+D+G+SS Q+D+ ERGF    + PLDMRM+P  ++ A  ILN +PE E+ RIL +YGEE     +   IV  R++  L STT L+
Subjt:  DSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLL

Query:  DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIKQT
        D+IR + P     RQ     A R FQALRIAVNDEL  LQ +L    D LAP GRLAVISFHSLEDR+VK  F +     T   ++          +   
Subjt:  DLIRKSTPGFKGGRQGWIKTATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIKQT

Query:  VKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK
         K ++ +++T++PIT SEEE ++N RS+SAKLRV QK
Subjt:  VKGSKGRVLTKRPITPSEEEERLNRRSRSAKLRVIQK

Arabidopsis top hits

e value

%identity

Alignment

AT5G10910.1 mraW methylase family protein

2.8e-127

60.38

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Query:  SISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEF---DENAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCT
        SI+  +G  N ++ +K +K K  +      K  E    +++  + KEKRRTRS++ +   D + +P    ++H+PVML EVLD+FSS     LRSFVDCT
Subjt:  SISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEF---DENAIPIGDTAAHIPVMLAEVLDVFSSSSGRPLRSFVDCT

Query:  VGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDP
        +GA GHSS+        IIQ+H EL  ++GMDVDP+A       I         LKA IVLKNFKY+KS++AD+  + LD GVDGILMDLGMSSMQV++P
Subjt:  VGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDP

Query:  ERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQAL
        ERGF VL +GPLDMRMDPQA+L AEDI+N+WPE E+GR+LRDYGEESNWY LQN+IVKAR  GGLHST +L+DLIR ++P  +GGRQGWIKTATRVFQ L
Subjt:  ERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLLDLIRKSTPGFKGGRQGWIKTATRVFQAL

Query:  RIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDI--------------INPKTEGDE-VAKVIEENEEWIKQTVKGSKGRVLTKRP
        RIAVNDEL  LQNSLY+ FD LAPGGRLAVISFHSLEDRVVKQTFLDI              + P+ + +E V K ++E EEWIKQTV  SKG +LTKRP
Subjt:  RIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDI--------------INPKTEGDE-VAKVIEENEEWIKQTVKGSKGRVLTKRP

Query:  ITPSEEEERLNRRSRSAKLRVIQK
        ITPSEEEERLNRR+RSAKLRVIQK
Subjt:  ITPSEEEERLNRRSRSAKLRVIQK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCATTTAGATCATCAATCGCGAAGTTCTCCTTGTTTTCTTCTTCGTCGCAATCTCTCCATTTTCACCATTTGTTCTTCACATGTACTACTCCGCCGCCGAGAATTTT
CCGGTTCTGCTCCATTTCTACTGCTTCTGGTGTTAAGAACAAGACAAAGAAGGAGAAGCATAAGAAATCGAAGAATCTCAAGGCGAGTACCTTGGTTTCGAAATCGTCGG
AGTCTGCTTCTTTATCTTCGAAGTTAGCTTTGGTGAAGGAGAAAAGGAGGACTCGGTCCACTAAGGAGTTTGATGAGAACGCTATCCCGATTGGCGACACAGCTGCTCAC
ATTCCGGTGATGCTTGCGGAAGTATTGGACGTATTCTCTAGTTCATCCGGAAGGCCGCTACGCTCCTTTGTAGATTGTACCGTCGGTGCCGGTGGACATTCCTCAGCGTT
GATGTTGTTGCATGAAGATGTGATAATTCAAGCGCATCCAGAGTTAAATTTTTACATGGGAATGGATGTTGATCCAATTGCTCTTGACAAGGCTCAAGATCGGATAAGTG
ATTTCTTCAGTGAGGATTCTGATTTGAAAGCATATATAGTTCTGAAGAACTTTAAATATTTGAAATCACTACTGGCTGATTCAGATGAGAAACCGTTAGATCCTGGAGTT
GATGGAATTTTGATGGATTTGGGAATGTCATCCATGCAGGTGGACGACCCTGAAAGAGGATTTAGAGTCCTTGGTGATGGACCTCTTGATATGCGAATGGATCCTCAGGC
AAGTCTAAAAGCAGAGGACATATTGAACAATTGGCCGGAAATAGAAGTGGGTCGTATCTTGCGGGATTATGGAGAAGAAAGCAATTGGTATTCTCTTCAGAATAAAATCG
TAAAAGCTCGATCACAGGGTGGATTGCATTCCACCACTCAATTACTTGATCTTATCCGCAAATCTACTCCAGGATTTAAAGGAGGAAGACAAGGGTGGATAAAGACAGCG
ACCAGGGTATTCCAAGCTCTTAGGATTGCTGTTAATGATGAACTCAATGTATTACAAAACTCCCTGTATACCTGTTTTGATTGCCTTGCTCCCGGCGGTCGACTTGCTGT
AATCTCCTTCCACAGTTTGGAGGATAGGGTTGTGAAGCAAACATTTCTAGACATCATTAACCCCAAAACAGAAGGAGATGAAGTCGCAAAGGTTATCGAAGAAAATGAAG
AATGGATTAAGCAAACTGTCAAGGGTTCCAAAGGCAGAGTCCTCACGAAAAGGCCTATAACTCCATCGGAGGAGGAAGAGAGGTTGAATCGACGTTCTAGGAGTGCTAAG
CTCAGAGTAATTCAGAAGAATATTGTTCTTTGCTGA

mRNA sequence

Show/hide mRNA sequence

GGAAATGTGAAATTCCCCATTTCCCTCCATTTTCAGACTATGCCGAAGAACTCTCCCATTCGAACTTCAAGATTTCATCGCTTTCCAGCTTCAACGATCTCATTCTCTCT
TCATCTGATGTAATCGGAGCTGTAGGAAATGGCATTTAGATCATCAATCGCGAAGTTCTCCTTGTTTTCTTCTTCGTCGCAATCTCTCCATTTTCACCATTTGTTCTTCA
CATGTACTACTCCGCCGCCGAGAATTTTCCGGTTCTGCTCCATTTCTACTGCTTCTGGTGTTAAGAACAAGACAAAGAAGGAGAAGCATAAGAAATCGAAGAATCTCAAG
GCGAGTACCTTGGTTTCGAAATCGTCGGAGTCTGCTTCTTTATCTTCGAAGTTAGCTTTGGTGAAGGAGAAAAGGAGGACTCGGTCCACTAAGGAGTTTGATGAGAACGC
TATCCCGATTGGCGACACAGCTGCTCACATTCCGGTGATGCTTGCGGAAGTATTGGACGTATTCTCTAGTTCATCCGGAAGGCCGCTACGCTCCTTTGTAGATTGTACCG
TCGGTGCCGGTGGACATTCCTCAGCGTTGATGTTGTTGCATGAAGATGTGATAATTCAAGCGCATCCAGAGTTAAATTTTTACATGGGAATGGATGTTGATCCAATTGCT
CTTGACAAGGCTCAAGATCGGATAAGTGATTTCTTCAGTGAGGATTCTGATTTGAAAGCATATATAGTTCTGAAGAACTTTAAATATTTGAAATCACTACTGGCTGATTC
AGATGAGAAACCGTTAGATCCTGGAGTTGATGGAATTTTGATGGATTTGGGAATGTCATCCATGCAGGTGGACGACCCTGAAAGAGGATTTAGAGTCCTTGGTGATGGAC
CTCTTGATATGCGAATGGATCCTCAGGCAAGTCTAAAAGCAGAGGACATATTGAACAATTGGCCGGAAATAGAAGTGGGTCGTATCTTGCGGGATTATGGAGAAGAAAGC
AATTGGTATTCTCTTCAGAATAAAATCGTAAAAGCTCGATCACAGGGTGGATTGCATTCCACCACTCAATTACTTGATCTTATCCGCAAATCTACTCCAGGATTTAAAGG
AGGAAGACAAGGGTGGATAAAGACAGCGACCAGGGTATTCCAAGCTCTTAGGATTGCTGTTAATGATGAACTCAATGTATTACAAAACTCCCTGTATACCTGTTTTGATT
GCCTTGCTCCCGGCGGTCGACTTGCTGTAATCTCCTTCCACAGTTTGGAGGATAGGGTTGTGAAGCAAACATTTCTAGACATCATTAACCCCAAAACAGAAGGAGATGAA
GTCGCAAAGGTTATCGAAGAAAATGAAGAATGGATTAAGCAAACTGTCAAGGGTTCCAAAGGCAGAGTCCTCACGAAAAGGCCTATAACTCCATCGGAGGAGGAAGAGAG
GTTGAATCGACGTTCTAGGAGTGCTAAGCTCAGAGTAATTCAGAAGAATATTGTTCTTTGCTGATGGAAAAAACCAATTGGCATTCTGACTTCTTTGCTATATGAAGGTT
AGTACTTCTACATACCAAAGACTCTTTCTCATTTGTAGCTTTTTCTCCATCTTTTTTGGATTTTTATTTACCAGTTCTTTAGAAAATTGTTTATTTATCTAACAATGTTA
GAAGAGGATTATAATGATAAGCACCTACTTTGTTAGATGTAAGTTAGAGGTCCTTTTGAAATATTCCCAAGTACTAAAAAAAGGAAACTGCTTAGATCAAATCTAGAATC
TATGATGGTCACTCTCGATCTTAAGACTATCCTTAGGAATAGTTTGATCAAAGATTAATCTAATTAATTGATTTTTAACATCAAATCTAAAGCAAGTTTTGAAAAAAAAA
AGTACCAAAAAAGTTGAATAAAGTTTTTCAACTTTGATATTCTAATTTTTCAAG

Protein sequence

Show/hide protein sequence

MAFRSSIAKFSLFSSSSQSLHFHHLFFTCTTPPPRIFRFCSISTASGVKNKTKKEKHKKSKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAH
IPVMLAEVLDVFSSSSGRPLRSFVDCTVGAGGHSSALMLLHEDVIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSDLKAYIVLKNFKYLKSLLADSDEKPLDPGV
DGILMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGGLHSTTQLLDLIRKSTPGFKGGRQGWIKTA
TRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINPKTEGDEVAKVIEENEEWIKQTVKGSKGRVLTKRPITPSEEEERLNRRSRSAK
LRVIQKNIVLC

Cmc04g0090611 (gene) of Melon (Charmono) v1.1 genome