; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0090861 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0090861
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionHistone deacetylase 18-like protein
Genome locationCMiso1.1chr04:2989637..2990466
RNA-Seq ExpressionCmc04g0090861
SyntenyCmc04g0090861
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038795.1 uncharacterized protein E6C27_scaffold92G003500 [Cucumis melo var. makuwa]3.7e-3197.18Show/hide
Query:  MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        MKKIPRWSD+IRKCAPWRAKSLEIIVPENLPRPSQRRK EAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
Subjt:  MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL

XP_004136339.1 uncharacterized protein LOC101204764 [Cucumis sativus]1.9e-2485.14Show/hide
Query:  MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAY-EFIDMKKNA-PGVQVISSEISSD-YCFSL
        MKKI RWSDKIRKCAPWRA SLEIIVPENLPR SQRRKWE IAY EFID+KKNA PG+QV +SEISSD YCFSL
Subjt:  MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAY-EFIDMKKNA-PGVQVISSEISSD-YCFSL

XP_022138217.1 uncharacterized protein LOC111009442 isoform X1 [Momordica charantia]3.2e-1972.46Show/hide
Query:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        KI RWSDK RKCAPWRA SLE IVPENLPRPSQRRKWE + +  +D++ NAP +QVISSE +S YCFSL
Subjt:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL

XP_023524416.1 uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo]9.3e-1975.36Show/hide
Query:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        KI RWSDK RKCA WRA SLEIIVPENLPRPSQRRKWEAIA+  ++   NAP VQVISS+  S YCFSL
Subjt:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL

XP_038899075.1 uncharacterized protein LOC120086473 [Benincasa hispida]9.0e-2279.71Show/hide
Query:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        KI RWSDK RKCAPWRA SLE IVPENLPRPS RRKWEAIAYE +D+ KNAPG++VISS+ SS+YCFSL
Subjt:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL

TrEMBL top hitse value%identityAlignment
A0A0A0LDQ8 Uncharacterized protein9.4e-2585.14Show/hide
Query:  MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAY-EFIDMKKNA-PGVQVISSEISSD-YCFSL
        MKKI RWSDKIRKCAPWRA SLEIIVPENLPR SQRRKWE IAY EFID+KKNA PG+QV +SEISSD YCFSL
Subjt:  MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAY-EFIDMKKNA-PGVQVISSEISSD-YCFSL

A0A5A7TBN7 Uncharacterized protein1.8e-3197.18Show/hide
Query:  MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        MKKIPRWSD+IRKCAPWRAKSLEIIVPENLPRPSQRRK EAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
Subjt:  MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL

A0A6J1CAG3 uncharacterized protein LOC111009442 isoform X11.6e-1972.46Show/hide
Query:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        KI RWSDK RKCAPWRA SLE IVPENLPRPSQRRKWE + +  +D++ NAP +QVISSE +S YCFSL
Subjt:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL

A0A6J1CAH3 uncharacterized protein LOC111009442 isoform X22.8e-1370.91Show/hide
Query:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQ
        KI RWSDK RKCAPWRA SLE IVPENLPRPSQRRKWE + +  +D++ NAP +Q
Subjt:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQ

A0A6J1FJG9 uncharacterized protein LOC1114460151.3e-1873.91Show/hide
Query:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        KI RWSDK RKCA WRA SLEIIVPENLPRPSQRRKWE IA+  ++   NAP VQVISS+  S YCFSL
Subjt:  KIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25625.1 unknown protein8.5e-1048.48Show/hide
Query:  RWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        RWSDK R C PW   SLE IVPENLPRPS  R+ E         K +AP V V+ + ++   CFS+
Subjt:  RWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL

AT2G25625.2 unknown protein8.5e-1048.48Show/hide
Query:  RWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL
        RWSDK R C PW   SLE IVPENLPRPS  R+ E         K +AP V V+ + ++   CFS+
Subjt:  RWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGATACCGAGATGGAGTGATAAGATTAGAAAATGCGCTCCATGGCGAGCGAAATCGTTGGAGATCATCGTGCCGGAGAATCTCCCGAGGCCGTCACAGCGTCG
GAAGTGGGAAGCCATTGCATATGAATTCATAGATATGAAGAAGAACGCTCCGGGAGTTCAAGTAATTTCTTCTGAAATTAGCTCTGATTACTGTTTCTCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
CCATCCATCCCTATATATACAACAATCATCTCTTCGGCTCCTCTGTTTTTGTATCAAATTAAAACTAGAGGTAATGGCTTTAACAATCAACTGTTCATCTTCTTCAGTTT
TTCTCCTTCCTCAACCTCCCCATCTGAATTCCTTCGATTCTACAAAAACCGCTAAATTACCTCTATAAGTCTTGATCAAATTACAACTCAATCGATCTCTACCGATTCTA
TGACGAATCGAGGAAAGAAGATGGAGGATCATGGAGAAGTCGAAGCGTATGCGCTTTAGGTTTAGCGAGTTTGATTTTCGCAATCGAAATCAGCGACGTCTTCATTGCTA
GTGAATCTCTTGCTCTGGAATCGTCGCCGCAACTTGTGGATTATTATTCACGGAGGCGTATGAAGAAGATACCGAGATGGAGTGATAAGATTAGAAAATGCGCTCCATGG
CGAGCGAAATCGTTGGAGATCATCGTGCCGGAGAATCTCCCGAGGCCGTCACAGCGTCGGAAGTGGGAAGCCATTGCATATGAATTCATAGATATGAAGAAGAACGCTCC
GGGAGTTCAAGTAATTTCTTCTGAAATTAGCTCTGATTACTGTTTCTCCTTGTAAATTTGTATGGCTTTTATTTTGTAAATCGTTGTATCAATCAATCACATCAATGGCT
ACATTGTTAATATTGCTTTTGATGTTCATCTTATTTCGTATCAATCAAATCCGATGTTCGTTTATTGATGAACATATCTTAGGATTGGAAAATTG
Protein sequenceShow/hide protein sequence
MKKIPRWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFIDMKKNAPGVQVISSEISSDYCFSL