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Cmc04g0091941 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0091941
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionprotein SPA, chloroplastic
Genome locationCMiso1.1chr04:3711504..3713327
RNA-Seq ExpressionCmc04g0091941
SyntenyCmc04g0091941
Gene Ontology termsGO:0010206 - photosystem II repair (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003756 - protein disulfide isomerase activity (molecular function)
InterPro domainsIPR035272 - Protein of unknown function DUF5351
IPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136388.1 protein disulfide-isomerase LQY1, chloroplastic [Cucumis sativus]2.8e-8498.09Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPT STSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGD+KEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_008466492.1 PREDICTED: protein SPA, chloroplastic [Cucumis melo]2.6e-85100Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_022142253.1 protein SPA, chloroplastic [Momordica charantia]9.4e-8094.27Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MT APSLSRLHSPFLY PLKPTS+ SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_022936404.1 protein SPA, chloroplastic [Cucurbita moschata]2.2e-8195.54Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

XP_038899789.1 protein SPA, chloroplastic [Benincasa hispida]2.7e-8296.82Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPS+SRLHSPFLYCPLKPTSSTSLSVTFS NQRSP +YPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDG GTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ55 Uncharacterized protein1.4e-8498.09Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPT STSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGD+KEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A1S3CRE4 protein SPA, chloroplastic1.2e-85100Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1CMU6 protein SPA, chloroplastic4.6e-8094.27Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MT APSLSRLHSPFLY PLKPTS+ SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1F877 protein SPA, chloroplastic1.1e-8195.54Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

A0A6J1IFD3 protein SPA, chloroplastic1.1e-8195.54Show/hide
Query:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR
        MTVAPSLSRLHSPFLYCPLKPTSS SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVGL S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQR
Subjt:  MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQR

Query:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  CRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

SwissProt top hitse value%identityAlignment
K4BVL1 Protein SPA, chloroplastic9.8e-6474.84Show/hide
Query:  MTVAPSLSRLHSPFLYCPLK-PT-SSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA
        M  APSLSR  SPF+  PLK PT SS+  +  F    R   SYP I+A+DLDQNTV+A++VG++SVA+G+GIPVFYETQIDNAAKRENTQPCFPC+G+GA
Subjt:  MTVAPSLSRLHSPFLYCPLK-PT-SSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGA

Query:  QRCRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        Q+CRFCMGTG+VTVELGG E EVSRCINCDG G LTCTTCQGSGIQPRYLDRREFKDDD
Subjt:  QRCRFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

Q8GSJ6 Protein disulfide-isomerase LQY1, chloroplastic5.4e-6275.64Show/hide
Query:  APSLSRLHSPFLYCPLKPTSSTSLSVTFSG-NQRSP-PSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRC
        APS  RLHSPF++CP+  T S     +FS  N RSP  SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GAQ+C
Subjt:  APSLSRLHSPFLYCPLKPTSSTSLSVTFSG-NQRSP-PSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRC

Query:  RFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        R C+G+GNVTVELGG EKEVS CINCDG G+LTCTTCQGSG+QPRYLDRREFKDDD
Subjt:  RFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

Arabidopsis top hitse value%identityAlignment
AT1G75690.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein3.8e-6375.64Show/hide
Query:  APSLSRLHSPFLYCPLKPTSSTSLSVTFSG-NQRSP-PSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRC
        APS  RLHSPF++CP+  T S     +FS  N RSP  SYPRI+A +LD NTVVA+SVG+ SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GAQ+C
Subjt:  APSLSRLHSPFLYCPLKPTSSTSLSVTFSG-NQRSP-PSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRC

Query:  RFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD
        R C+G+GNVTVELGG EKEVS CINCDG G+LTCTTCQGSG+QPRYLDRREFKDDD
Subjt:  RFCMGTGNVTVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD

AT2G24860.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein6.2e-0528.36Show/hide
Query:  CFPCSGSGAQRCRFCMGTGNVTVELGGDE------KEVSRCINCDGVGTLTCTTCQGSGIQPRYLDR
        C  C+  G   C++C GTG   +   GD          + C+ C G G+ +C+ C+G+G + ++L++
Subjt:  CFPCSGSGAQRCRFCMGTGNVTVELGGDE------KEVSRCINCDGVGTLTCTTCQGSGIQPRYLDR

AT4G13670.1 plastid transcriptionally active 56.9e-0429.7Show/hide
Query:  RAIDLDQNTVVALSVGL---VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDE--KEVSRCINCDGVGTLTCTTCQ
        R +D+ QN V  L        S  +G   PV      D +        C  C G G   C  C GTG   +E    E   E ++C  C+G+G   C  C 
Subjt:  RAIDLDQNTVVALSVGL---VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDE--KEVSRCINCDGVGTLTCTTCQ

Query:  G
        G
Subjt:  G


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTAGCACCTTCGCTTTCCCGCCTCCATTCTCCATTTCTGTATTGTCCTCTCAAGCCAACTTCATCTACCTCTTTATCAGTCACATTCTCTGGAAATCAACGATC
GCCACCATCATATCCACGCATCAGAGCAATAGATCTTGACCAAAACACGGTGGTGGCACTTTCAGTTGGGCTGGTGAGTGTTGCAGTTGGAATAGGTATTCCCGTCTTCT
ACGAAACCCAAATTGATAATGCTGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGTAGTGGTTCAGGAGCACAGAGATGCAGATTTTGCATGGGAACTGGCAATGTG
ACTGTAGAACTTGGTGGAGATGAAAAAGAAGTCTCCCGGTGTATTAACTGTGACGGTGTTGGCACATTGACATGTACTACATGTCAGGGCTCTGGAATTCAACCTCGATA
CCTAGACCGCAGAGAATTTAAAGATGATGATTGA
mRNA sequenceShow/hide mRNA sequence
GGATGAGTGGTGGGTCTGTAGTAGAGCAGAGGCAGCCAGTAACGGATATCCAAAATCCTGGAATGCGTGGTGAAGCTTTGTAGCTTTGAAACAAACCACAGCTTCAAGTG
TTTTCTTTAGGAATTGGGACTGAGACTGACTTTCTTTTTCTTTCTGATTCGGAGCTCTCACAAGCAAAGGAATCGAGTCCAAGGAATTCAGAAATGACAGTAGCACCTTC
GCTTTCCCGCCTCCATTCTCCATTTCTGTATTGTCCTCTCAAGCCAACTTCATCTACCTCTTTATCAGTCACATTCTCTGGAAATCAACGATCGCCACCATCATATCCAC
GCATCAGAGCAATAGATCTTGACCAAAACACGGTGGTGGCACTTTCAGTTGGGCTGGTGAGTGTTGCAGTTGGAATAGGTATTCCCGTCTTCTACGAAACCCAAATTGAT
AATGCTGCAAAGCGTGAAAATACTCAGCCCTGCTTTCCCTGTAGTGGTTCAGGAGCACAGAGATGCAGATTTTGCATGGGAACTGGCAATGTGACTGTAGAACTTGGTGG
AGATGAAAAAGAAGTCTCCCGGTGTATTAACTGTGACGGTGTTGGCACATTGACATGTACTACATGTCAGGGCTCTGGAATTCAACCTCGATACCTAGACCGCAGAGAAT
TTAAAGATGATGATTGAAGCCCTGCAGAACCAAACCCGGCAACATCACCGATTCCGATTTTGTGTTTAATTTGATGGCTTGAAATTGGCTTGAACCTTGTTAGTTCCATT
GAATCGAAGAGCTTGGTAACTTCTACCTAGCAATTCTTTTTGGTAACTTGCATTCTTCTAATGTATATCTGTGGTTAATAATACAAACAACATTGTAAAAGGAGAGAAGA
ATTAACTGTACTATCCCGAGATTATGAATTCATCTCTATTCACTGTCAGTGAAATCAGAAATGGGGGATCAAACGCAATCTGATAATCAAAAGCACTTCTTTTTGGTACT
TTTT
Protein sequenceShow/hide protein sequence
MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNV
TVELGGDEKEVSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD