CuGenDBv2

Gene ID	Cmc04g0092271
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Genome location	CMiso1.1chr04:4129066..4131914
RNA-Seq Expression	Cmc04g0092271
Synteny	Cmc04g0092271
Gene Ontology terms	GO:0006952 - defense response (biological process) GO:0007165 - signal transduction (biological process) GO:0015074 - DNA integration (biological process) GO:0055085 - transmembrane transport (biological process) GO:0016020 - membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0043531 - ADP binding (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase IPR025724 - GAG-pre-integrase domain IPR036397 - Ribonuclease H superfamily IPR043502 - DNA/RNA polymerase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0025181.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

0.0e+00

88.65

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEE+QSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKKSTEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSG VILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

KAA0036309.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

0.0e+00

88.76

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEE+QSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKKSTEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

TYJ95793.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

0.0e+00

88.87

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEEEQSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKKSTEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

TYK12368.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

0.0e+00

88.65

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEEEQSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWS KKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKK+TEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

TYK21117.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]

0.0e+00

88.87

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEEEQSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKKSTEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SLQ2 Retrovirus-related Pol polyprotein from transposon TNT 1-94

0.0e+00

88.65

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEE+QSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKKSTEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSG VILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

A0A5D3CMK4 Retrovirus-related Pol polyprotein from transposon TNT 1-94

0.0e+00

88.65

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEEEQSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWS KKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKK+TEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

A0A5D3DBU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94

0.0e+00

88.87

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEEEQSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKKSTEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

A0A5D3DMJ1 Retrovirus-related Pol polyprotein from transposon TNT 1-94

0.0e+00

88.87

Show/hide

Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEEEQSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKKSTEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

A0A5D3E2V7 Retrovirus-related Pol polyprotein from transposon TNT 1-94

0.0e+00

88.76

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Query:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH
        K +G + +   K  ++IQDVLFV DINQNLLSVGQLIEKGFKVTFENEYC IKDAANQDIFKVKMKGK FSLNPLEE+QSVFALKEDETQLWHKRVGHYH
Subjt:  KERGLLRLQVVK-VQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYH

Query:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK
        HQGLLQLTELALDFPKLS+EIS+CKACHFGKQNRKSFPKSSWRATQ LQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVA VFWKFK
Subjt:  HQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFK

Query:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT
        ARVENESGCKIQMVRSDNGKEYVS EFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYI+EMTRCMLHEKSLPKKFWAEAANT +FLQNRLPTKA+KEKT
Subjt:  ARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKT

Query:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS
        PFEAWYGYKPSLKFLKVFGCLC THVPQSKRDKLDRRAS GVFIGYSSI+KAYKIFQP+TGKIVVSRDVHF EDEEWNFDDAEKKGQTLEKMKFKFFDSS
Subjt:  PFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSS

Query:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------
        IEEEDDRQNEIVDDA VRGTRLLSDIYER NVAVCEPANYA+AKKDQRW+AAMEEELSMIEKNKTW L+                               
Subjt:  IEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAVCEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLL-------------------------------

Query:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH
                        T   + RMDTIRLLFAIAAQKGWKLYQ DVKSAFLNGVLQEEIYVEQPEGCEKQGE NKVYLLKKALYGLKQAPRAWYSKIDEH
Subjt:  ----------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEH

Query:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA
        LLSLGFLKSLS S LYVKHNGT+ILIVSLYVDDLLVTGNNADHIQNFKWE+MKMFEMTDL LMSYFLGIEIKQGQ EVFICQKKYAKEILKKFKMDECKA
Subjt:  LLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKA

Query:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS
        VSTPMNQK+KLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILN +SILS FMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGK+FKLIGFS+SDWGGS
Subjt:  VSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGS

Query:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
        IDD+RSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFI ATATANQALWLRKILLDLDLEQKKSTEILVDNKA IAISHNPVFYKKTKHFNIKLFFLRE
Subjt:  IDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

Query:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
        VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS
Subjt:  VQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGVCNS

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

5.4e-122

30.16

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Query:  ERGLLRLQVVKVQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLE-EEQSVFALKEDETQLWHKRVGHYHH
        +RG++RL+      ++DVLF  +   NL+SV +L E G  + F+    +I   +   +  VK  G + ++  +  +  S+ A  ++  +LWH+R GH   
Subjt:  ERGLLRLQVVKVQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLE-EEQSVFALKEDETQLWHKRVGHYHH

Query:  QGLLQL-------TELALDFPKLSKEISNCKACHFGKQNRKSFP--KSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEV
          LL++        +  L+  +LS EI  C+ C  GKQ R  F   K      + L ++H+DV GP    +L    Y++ F+D FT  C  + +K+KS+V
Subjt:  QGLLQL-------TELALDFPKLSKEISNCKACHFGKQNRKSFP--KSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEV

Query:  ARVFWKFKARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLP
          +F  F A+ E     K+  +  DNG+EY+S E  +FC   GI + LT P+TPQ NGVSER  R I E  R M+    L K FW EA  T  +L NR+P
Subjt:  ARVFWKFKARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLP

Query:  TKAV--KEKTPFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDV---------------------
        ++A+    KTP+E W+  KP LK L+VFG     H+ ++K+ K D ++   +F+GY      +K++     K +V+RDV                     
Subjt:  TKAV--KEKTPFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDV---------------------

Query:  --------------------------------HFVED----EEWNF-DDAEKKGQT------------------LEKMKFKFFDSSIEEEDDRQNE----
                                         F++D    E  NF +D+ K  QT                   E  K+   +S   + DD  NE    
Subjt:  --------------------------------HFVED----EEWNF-DDAEKKGQT------------------LEKMKFKFFDSSIEEEDDRQNE----

Query:  -------------------IVDDAFVRGTRLLSDIYER---------------FNVAVCE--------PANYAKAK-KDQR--WVAAMEEELSMIEKNKT
                           I +     G  +++   ER                N  V          P ++ + + +D +  W  A+  EL+  + N T
Subjt:  -------------------IVDDAFVRGTRLLSDIYER---------------FNVAVCE--------PANYAKAK-KDQR--WVAAMEEELSMIEKNKT

Query:  WTLL-----------------------------------------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPE
        WT+                                                T   + R+ + R + ++  Q   K++Q DVK+AFLNG L+EEIY+  P+
Subjt:  WTLL-----------------------------------------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPE

Query:  GCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYV--KHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLM
        G     +   V  L KA+YGLKQA R W+   ++ L    F+ S     +Y+  K N    + V LYVDD+++   +   + NFK  +M+ F MTDL  +
Subjt:  GCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYV--KHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLM

Query:  SYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMY-LTATRPDILNVLSILSCFMHCASELHLK
         +F+GI I+  + ++++ Q  Y K+IL KF M+ C AVSTP+  K    +   +D+      RSLIGCLMY +  TRPD+   ++ILS +    +    +
Subjt:  SYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMY-LTATRPDILNVLSILSCFMHCASELHLK

Query:  AAKRVIRYVKGTSDFGVKFTRGKKF--KLIGFSNSDWGGSIDDIRSTLGYCFTL-SSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLD
          KRV+RY+KGT D  + F +   F  K+IG+ +SDW GS  D +ST GY F +    +  W++K+Q  VA S+ EAE++       +ALWL+ +L  ++
Subjt:  AAKRVIRYVKGTSDFGVKFTRGKKF--KLIGFSNSDWGGSIDDIRSTLGYCFTL-SSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLD

Query:  LEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGV
        ++ +   +I  DN+  I+I++NP  +K+ KH +IK  F RE  ++  + L Y  TE+Q+ADI TKPLP  +F  LR KLG+
Subjt:  LEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

7.5e-140

32.91

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Query:  METTSQSKERGL----LRLQVVKVQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSI--------KDAANQDIFKVKMKGKMFSLNPLEEEQSVF
        M  TS SK  G+    ++  V     ++DV  V D+  NL+S   L   G++  F N+   +        K  A   +++   +     LN  ++E SV 
Subjt:  METTSQSKERGL----LRLQVVKVQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSI--------KDAANQDIFKVKMKGKMFSLNPLEEEQSVF

Query:  ALKEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCW
                LWHKR+GH   +GL  L + +L        +  C  C FGKQ+R SF  SS R    L L+++DV GP    S+ G+ Y++ FIDD +R  W
Subjt:  ALKEDETQLWHKRVGHYHHQGLLQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCW

Query:  IFFLKFKSEVARVFWKFKARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAAN
        ++ LK K +V +VF KF A VE E+G K++ +RSDNG EY S EF+++C   GI+H+ T P TPQ NGV+ER NR I+E  R ML    LPK FW EA  
Subjt:  IFFLKFKSEVARVFWKFKARVENESGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAAN

Query:  TTIFLQNRLPTKAVKEKTPFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDA
        T  +L NR P+  +  + P   W   + S   LKVFGC    HVP+ +R KLD ++   +FIGY      Y+++ P   K++ SRDV F E E     D 
Subjt:  TTIFLQNRLPTKAVKEKTPFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDA

Query:  EKKGQTLEKMKFKFFDS---------SIEEEDDRQNEIVDDAFVRGTRLLSDIYE---------------RFNVAVCEPANYAKAK--------------
         +K +      F    S         S  +E   Q E   +   +G +L   + E               R      E   Y   +              
Subjt:  EKKGQTLEKMKFKFFDS---------SIEEEDDRQNEIVDDAFVRGTRLLSDIYE---------------RFNVAVCEPANYAKAK--------------

Query:  ------KDQRWVAAMEEELSMIEKNKTWTLLT--------------------DLKIGR---------------------------MDTIRLLFAIAAQKG
              +  + + AM+EE+  ++KN T+ L+                     D K+ R                           M +IR + ++AA   
Subjt:  ------KDQRWVAAMEEELSMIEKNKTWTLLT--------------------DLKIGR---------------------------MDTIRLLFAIAAQKG

Query:  WKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVKH-NGTSILIVSLYVDDLLVT
         ++ Q DVK+AFL+G L+EEIY+EQPEG E  G+ + V  L K+LYGLKQAPR WY K D  + S  +LK+ S   +Y K  +  + +I+ LYVDD+L+ 
Subjt:  WKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVKH-NGTSILIVSLYVDDLLVT

Query:  GNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEI--KQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEG------YFRSLI
        G +   I   K ++ K F+M DL      LG++I  ++   ++++ Q+KY + +L++F M   K VSTP+    KL K+     V+E        + S +
Subjt:  GNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEI--KQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEG------YFRSLI

Query:  GCLMY-LTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKKQEI
        G LMY +  TRPDI + + ++S F+    + H +A K ++RY++GT+   + F  G    L G++++D  G ID+ +S+ GY FT S G  SW SK Q+ 
Subjt:  GCLMY-LTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKKQEI

Query:  VAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPT
        VA ST EAE+I AT T  + +WL++ L +L L QK+   +  D+++ I +S N +++ +TKH +++  ++RE+     + ++   T +  AD+LTK +P 
Subjt:  VAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPT

Query:  CKFEFLRSKLGV
         KFE  +  +G+
Subjt:  CKFEFLRSKLGV

P25600 Putative transposon Ty5-1 protein YCL074W

1.5e-34

31.68

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Query:  DVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHI
        DV +AFLN  + E IYV+QP G   +   + V+ L   +YGLKQAP  W   I+  L  +GF +      LY +      + +++YVDDLLV   +    
Subjt:  DVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHI

Query:  QNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQS-EVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTAT-RPDI
           K E+ K++ M DL  +  FLG+ I Q  + ++ +  + Y  +   + +++  K   TP+   K L +       D   ++S++G L++   T RPDI
Subjt:  QNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQS-EVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTAT-RPDI

Query:  LNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKK-QEIVAQSTAEAEFITA
           +S+LS F+     +HL++A+RV+RY+  T    +K+  G +  L  + ++  G   D   ST GY   L+    +WSSKK + ++   + EAE+ITA
Subjt:  LNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKK-QEIVAQSTAEAEFITA

Query:  TAT
        + T
Subjt:  TAT

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

5.6e-119

28.86

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Query:  NIQDVLFVLDINQNLLSVGQLIE-KGFKVTFENEYCSIKDA-ANQDIFKVKMKGKMFSLNPLEEEQ--SVFALKEDET--QLWHKRVGHYHHQGLLQ-LT
        N+ ++L+V +I++NL+SV +L    G  V F      +KD      + + K K +++   P+   Q  S+FA    +     WH R+GH     L   ++
Subjt:  NIQDVLFVLDINQNLLSVGQLIE-KGFKVTFENEYCSIKDA-ANQDIFKVKMKGKMFSLNPLEEEQ--SVFALKEDET--QLWHKRVGHYHHQGLLQ-LT

Query:  ELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLK--GSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFKARVENE
          +L     S +  +C  C   K N+  F +S+  +T+ L+ I++DV     +P L      YY+ F+D FTR  W++ LK KS+V   F  FK  +EN 
Subjt:  ELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLK--GSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFKARVENE

Query:  SGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKTPFEAWY
           +I    SDNG E+V+    ++    GI H  + P+TP+ NG+SER++R+I+E    +L   S+PK +W  A    ++L NRLPT  ++ ++PF+  +
Subjt:  SGCKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKTPFEAWY

Query:  GYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHF----------------VEDEE------WN------
        G  P+   L+VFGC C   +    + KLD ++   VF+GYS    AY     +T ++ +SR V F                V+++       W+      
Subjt:  GYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHF----------------VEDEE------WN------

Query:  ---------------------------FDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN------------------------------------------
                                   F +++     L+      F SS E    RQN                                          
Subjt:  ---------------------------FDDAEKKGQTLEKMKFKFFDSSIEEEDDRQN------------------------------------------

Query:  ----------------------------------EIVD-------DAFVRGTRLLSDIYE---RFNVAV-----CEPANYAKAKKDQRWVAAMEEELSMI
                                          +IV+       +    GTR  + I +   ++++AV      EP    +A KD+RW  AM  E++  
Subjt:  ----------------------------------EIVD-------DAFVRGTRLLSDIYE---RFNVAV-----CEPANYAKAKKDQRWVAAMEEELSMI

Query:  EKNKTWTLL------------------------------------------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEI
          N TW L+                                                T   + +  +IR++  +A  + W + Q DV +AFL G L +++
Subjt:  EKNKTWTLL------------------------------------------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEI

Query:  YVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTD
        Y+ QP G   +   N V  L+KALYGLKQAPRAWY ++  +LL++GF+ S+S + L+V   G SI+ + +YVDD+L+TGN+   + N    + + F + D
Subjt:  YVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTD

Query:  LRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASEL
           + YFLGIE K+  + + + Q++Y  ++L +  M   K V+TPM    KL    G    D   +R ++G L YL  TRPDI   ++ LS FMH  +E 
Subjt:  LRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASEL

Query:  HLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLD
        HL+A KR++RY+ GT + G+   +G    L  +S++DW G  DD  ST GY   L     SWSSKKQ+ V +S+ EAE+ +   T+++  W+  +L +L 
Subjt:  HLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLD

Query:  LEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGV
        +   +   I  DN     +  NPVF+ + KH  I   F+R   +SG + +V+  T DQ+AD LTKPL    F+   SK+GV
Subjt:  LEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

8.1e-110

27.7

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Query:  NIQDVLFVLDINQNLLSVGQLIEKG-FKVTFENEYCSIKDA-ANQDIFKVKMKGKMFSLNPLEEEQ--SVFA--LKEDETQLWHKRVGHYHHQGLLQ-LT
        ++  VL+V +I++NL+SV +L       V F      +KD      + + K K +++   P+   Q  S+FA    +     WH R+GH     L   ++
Subjt:  NIQDVLFVLDINQNLLSVGQLIEKG-FKVTFENEYCSIKDA-ANQDIFKVKMKGKMFSLNPLEEEQ--SVFA--LKEDETQLWHKRVGHYHHQGLLQ-LT

Query:  ELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFKARVENESG
          +L     S ++ +C  C   K ++  F  S+  +++ L+ I++DV       S+    YY+ F+D FTR  W++ LK KS+V   F  FK+ VEN   
Subjt:  ELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFKARVENESG

Query:  CKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKTPFEAWYGY
         +I  + SDNG E+V      +    GI H  + P+TP+ NG+SER++R+I+EM   +L   S+PK +W  A +  ++L NRLPT  ++ ++PF+  +G 
Subjt:  CKIQMVRSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKTPFEAWYGY

Query:  KPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVE--------------DEEWNFDDAEKKGQ-------
         P+ + LKVFGC C   +    R KL+ ++    F+GYS    AY      TG++  SR V F E               +E   D A            
Subjt:  KPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVE--------------DEEWNFDDAEKKGQ-------

Query:  ----------------------------TLEKMKFKFFDSSIEE-------------------------------------------EDDRQNEIVDDAF
                                    T +        SSI                                                 QN  +  + 
Subjt:  ----------------------------TLEKMKFKFFDSSIEE-------------------------------------------EDDRQNEIVDDAF

Query:  V--------------------------------------------------RGTRLLSDI--------YERFNVAVCEPANYAKAKKDQRWVAAMEEELS
        +                                                    TR    I        Y     A  EP    +A KD RW  AM  E++
Subjt:  V--------------------------------------------------RGTRLLSDI--------YERFNVAVCEPANYAKAKKDQRWVAAMEEELS

Query:  MIEKNKTWTLL------------------------------------------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQE
            N TW L+                                                T   + +  +IR++  +A  + W + Q DV +AFL G L +
Subjt:  MIEKNKTWTLL------------------------------------------------TDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQE

Query:  EIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEM
        E+Y+ QP G   +   + V  L+KA+YGLKQAPRAWY ++  +LL++GF+ S+S + L+V   G SI+ + +YVDD+L+TGN+   +++    + + F +
Subjt:  EIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEM

Query:  TDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCAS
         +   + YFLGIE K+    + + Q++Y  ++L +  M   K V+TPM    KL    G    D   +R ++G L YL  TRPD+   ++ LS +MH  +
Subjt:  TDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCAS

Query:  ELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLD
        + H  A KRV+RY+ GT D G+   +G    L  +S++DW G  DD  ST GY   L     SWSSKKQ+ V +S+ EAE+ +   T+++  W+  +L +
Subjt:  ELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLD

Query:  LDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGV
        L ++      I  DN     +  NPVF+ + KH  +   F+R   +SG + +V+  T DQ+AD LTKPL    F+    K+GV
Subjt:  LDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADILTKPLPTCKFEFLRSKLGV

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

4.7e-65

36.65

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Query:  RMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEG-CEKQGEG---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVK
        ++ +++L+ AI+A   + L+Q D+ +AFLNG L EEIY++ P G   +QG+    N V  LKK++YGLKQA R W+ K    L+  GF++S S    ++K
Subjt:  RMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEG-CEKQGEG---NKVYLLKKALYGLKQAPRAWYSKIDEHLLSLGFLKSLSASILYVK

Query:  HNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGAD
           T  L V +YVDD+++  NN   +   K ++   F++ DL  + YFLG+EI +  + + ICQ+KYA ++L +  +  CK  S PM+         G D
Subjt:  HNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGAD

Query:  KVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGV
         VD   +R LIG LMYL  TR DI   ++ LS F       H +A  +++ Y+KGT   G+ ++   + +L  FS++ +    D  RST GYC  L + +
Subjt:  KVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGV

Query:  FSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE
         SW SKKQ++V++S+AEAE+   +   ++ +WL +   +L L   K T +  DN A I I+ N VF+++TKH       +RE
Subjt:  FSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein

4.1e-08

36.71

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Query:  MYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYC
        MYLT TRPD+   ++ LS F   +    ++A  +V+ YVKGT   G+ ++     +L  F++SDW    D  RS  G+C
Subjt:  MYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYC

ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

1.8e-11

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Query:  NRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKTPFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKI
        NR I+E  R ML E  LPK F A+AANT + + N+ P+ A+    P E W+   P+  +L+ FGC+   H  +    KL  RA  G   G   IN+   I
Subjt:  NRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKTPFEAWYGYKPSLKFLKVFGCLCLTHVPQSKRDKLDRRASSGVFIGYSSINKAYKI

ATMG00810.1 DNA/RNA polymerases superfamily protein

1.8e-35

38.74

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Query:  LYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSL
        LYVDD+L+TG++   +    +++   F M DL  + YFLGI+IK   S +F+ Q KYA++IL    M +CK +STP+  K        A   D   FRS+
Subjt:  LYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAVSTPMNQKKKLCKEDGADKVDEGYFRSL

Query:  IGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKKQEI
        +G L YLT TRPDI   ++I+   MH  +       KRV+RYVKGT   G+   +  K  +  F +SDW G     RST G+C  L   + SWS+K+Q  
Subjt:  IGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYCFTLSSGVFSWSSKKQEI

Query:  VAQSTAEAEFITATATANQALW
        V++S+ E E+     TA +  W
Subjt:  VAQSTAEAEFITATATANQALW

Sequences

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CDS sequence

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ATGGAGACTACATCTCAGTCAAAGGAAAGGGGACTATTGCGATTGCAAGTTGTAAAGGTACAAAACATACAGGATGTTCTTTTTGTACTTGACATTAACCAAAATCTGTT
GAGTGTGGGTCAACTTATTGAAAAAGGTTTTAAAGTTACTTTTGAAAATGAATACTGCTCGATTAAGGATGCAGCAAATCAAGATATTTTCAAAGTAAAAATGAAAGGAA
AAATGTTTTCACTCAATCCTTTAGAGGAGGAGCAATCTGTTTTTGCTCTCAAAGAAGATGAAACACAACTTTGGCACAAAAGAGTCGGTCACTATCATCATCAAGGGCTA
CTGCAACTAACAGAGTTGGCACTTGATTTTCCCAAGCTTAGTAAAGAAATCTCAAACTGCAAAGCGTGTCATTTTGGAAAGCAAAATAGGAAGTCATTTCCCAAGTCATC
TTGGAGAGCCACTCAAAACTTGCAGCTCATTCACACAGATGTTGCAGGTCCTCAGAGAACACCTTCTTTAAAAGGCAGTCTCTATTATATTGCCTTTATTGATGACTTCA
CCAGAATGTGCTGGATTTTTTTCTTGAAGTTTAAATCAGAGGTTGCTCGTGTCTTTTGGAAGTTCAAGGCAAGAGTTGAAAATGAAAGTGGTTGCAAAATTCAAATGGTA
AGGTCTGACAATGGGAAGGAGTATGTTTCGACAGAATTTGACAAGTTTTGTGAAGATTCAGGCATAAAACATCAACTTACAGCTCCTTACACTCCTCAACAAAATGGAGT
TAGTGAGAGGAGAAATAGATACATCCTGGAGATGACAAGATGCATGCTGCATGAAAAGAGTTTGCCAAAGAAGTTTTGGGCAGAGGCAGCAAATACAACTATATTTCTTC
AAAATAGGCTTCCCACAAAAGCAGTGAAGGAAAAGACACCATTTGAGGCATGGTATGGGTACAAACCATCACTGAAATTTCTCAAAGTATTTGGTTGTTTGTGTCTCACT
CATGTTCCACAGAGCAAGCGTGACAAACTTGATAGGAGAGCTTCATCGGGTGTCTTTATAGGCTATAGTTCTATCAACAAAGCCTATAAAATTTTCCAGCCAAAAACTGG
AAAGATTGTCGTGAGCAGGGATGTTCACTTCGTGGAAGATGAAGAGTGGAACTTTGATGATGCAGAGAAGAAAGGTCAGACCTTGGAAAAGATGAAATTCAAGTTTTTTG
ATTCAAGCATTGAAGAGGAAGATGACAGGCAGAATGAAATAGTAGATGATGCTTTCGTGAGAGGAACAAGGTTACTTTCTGATATTTATGAAAGGTTTAATGTTGCTGTG
TGTGAACCTGCAAACTATGCAAAAGCAAAGAAAGATCAAAGGTGGGTAGCTGCAATGGAGGAGGAGTTGTCAATGATAGAGAAGAACAAAACTTGGACCTTGTTGACAGA
CCTCAAGATAGGAAGAATGGACACAATCAGGTTACTATTTGCAATAGCTGCACAAAAGGGCTGGAAATTGTATCAGTGGGATGTCAAATCAGCCTTTTTGAATGGTGTCT
TACAAGAAGAAATTTATGTTGAGCAGCCCGAAGGATGTGAGAAGCAAGGTGAAGGAAATAAAGTCTATCTTCTCAAGAAGGCTCTTTATGGTTTAAAACAAGCTCCAAGA
GCTTGGTATAGCAAAATTGATGAACATTTACTAAGCTTGGGATTTTTGAAAAGTCTATCAGCATCAATCTTATATGTTAAGCACAATGGTACTAGCATTCTTATTGTTTC
ACTGTATGTTGATGACCTACTGGTTACAGGAAACAATGCAGATCATATTCAAAATTTCAAATGGGAGATAATGAAGATGTTTGAAATGACAGATCTCAGGCTCATGTCCT
ACTTCCTTGGCATAGAGATCAAGCAAGGGCAAAGTGAAGTTTTCATTTGCCAGAAAAAATATGCAAAGGAAATACTAAAGAAGTTTAAGATGGATGAGTGTAAGGCAGTA
AGCACTCCAATGAATCAAAAAAAGAAGTTGTGCAAAGAAGATGGTGCTGACAAAGTTGATGAAGGATATTTTAGGAGTTTAATTGGTTGCTTGATGTATCTTACAGCAAC
AAGACCTGATATTTTGAATGTTTTGAGTATTTTGTCTTGTTTCATGCATTGTGCAAGTGAATTACATCTTAAGGCAGCAAAAAGAGTGATTCGATATGTCAAAGGCACAA
GTGATTTTGGTGTTAAGTTCACTAGGGGCAAGAAGTTCAAGCTGATTGGTTTTTCTAATAGTGATTGGGGAGGTTCCATTGATGATATAAGAAGCACTTTAGGCTACTGT
TTTACTCTTAGCTCTGGTGTTTTCTCTTGGAGCTCGAAAAAGCAAGAGATTGTAGCTCAATCCACTGCTGAAGCAGAATTTATTACTGCAACAGCTACTGCCAATCAAGC
TTTATGGCTGAGAAAAATTTTACTTGACCTTGATCTGGAGCAGAAGAAAAGCACGGAGATTCTTGTTGATAACAAAGCTACTATTGCTATTTCTCATAATCCTGTGTTTT
ATAAGAAGACTAAACATTTTAACATCAAGTTATTTTTTCTAAGGGAAGTGCAGAAAAGTGGAGAGGTGATTCTTGTCTACTGTAAAACAGAAGATCAAGTTGCAGACATA
TTAACTAAACCGTTGCCTACTTGCAAGTTCGAGTTTCTAAGGTCAAAACTTGGTGTTTGCAACTCCTAA

mRNA sequence

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Protein sequence

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METTSQSKERGLLRLQVVKVQNIQDVLFVLDINQNLLSVGQLIEKGFKVTFENEYCSIKDAANQDIFKVKMKGKMFSLNPLEEEQSVFALKEDETQLWHKRVGHYHHQGL
LQLTELALDFPKLSKEISNCKACHFGKQNRKSFPKSSWRATQNLQLIHTDVAGPQRTPSLKGSLYYIAFIDDFTRMCWIFFLKFKSEVARVFWKFKARVENESGCKIQMV
RSDNGKEYVSTEFDKFCEDSGIKHQLTAPYTPQQNGVSERRNRYILEMTRCMLHEKSLPKKFWAEAANTTIFLQNRLPTKAVKEKTPFEAWYGYKPSLKFLKVFGCLCLT
HVPQSKRDKLDRRASSGVFIGYSSINKAYKIFQPKTGKIVVSRDVHFVEDEEWNFDDAEKKGQTLEKMKFKFFDSSIEEEDDRQNEIVDDAFVRGTRLLSDIYERFNVAV
CEPANYAKAKKDQRWVAAMEEELSMIEKNKTWTLLTDLKIGRMDTIRLLFAIAAQKGWKLYQWDVKSAFLNGVLQEEIYVEQPEGCEKQGEGNKVYLLKKALYGLKQAPR
AWYSKIDEHLLSLGFLKSLSASILYVKHNGTSILIVSLYVDDLLVTGNNADHIQNFKWEIMKMFEMTDLRLMSYFLGIEIKQGQSEVFICQKKYAKEILKKFKMDECKAV
STPMNQKKKLCKEDGADKVDEGYFRSLIGCLMYLTATRPDILNVLSILSCFMHCASELHLKAAKRVIRYVKGTSDFGVKFTRGKKFKLIGFSNSDWGGSIDDIRSTLGYC
FTLSSGVFSWSSKKQEIVAQSTAEAEFITATATANQALWLRKILLDLDLEQKKSTEILVDNKATIAISHNPVFYKKTKHFNIKLFFLREVQKSGEVILVYCKTEDQVADI
LTKPLPTCKFEFLRSKLGVCNS

Cmc04g0092271 (gene) of Melon (Charmono) v1.1 genome