; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0092781 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0092781
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr04:4756146..4757117
RNA-Seq ExpressionCmc04g0092781
SyntenyCmc04g0092781
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-17196.5Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MR+HKPRSKLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTETQVVIPDDGVEDPLSYKQ MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQTFKARLVAKGYTQREGVDYE+T SPVAMLK IRILLSIATFYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQASRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLY+DDILLIGNDVGYLTDVKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGEAQYVL
Subjt:  QFQMKDLGEAQYVL

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-16894.9Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MR+HKPRSKLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTETQVVIPDDGVEDPLSYKQ MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQTFKARLVAKGYT++EGVDYE+T S VAMLK IRILLSIA FYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQASRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLY+DDILLIGNDVGYLTDVKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGE QYVL
Subjt:  QFQMKDLGEAQYVL

KAA0048178.1 gag/pol protein [Cucumis melo var. makuwa]6.5e-16894.9Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLT+TQVVIPDDGVEDPLSYK  MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQT KARLVAKGYTQREGVDYE+T SPVAMLK IRILLSIATFYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQAS SWNIRFDTAIKSY FDQNVDE C YKKINKGKVAFLVLY+DDILLIGNDVGYLT+VKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGE+QYVL
Subjt:  QFQMKDLGEAQYVL

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-17196.5Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MR+HKPRSKLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTETQVVIPDDGVEDPLSYKQ MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQTFKARLVAKGYTQREGVDYE+T SPVAMLK IRILLSIATFYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQASRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLY+DDILLIGNDVGYLTDVKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGEAQYVL
Subjt:  QFQMKDLGEAQYVL

TYK15984.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-17196.5Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MR+HKPRSKLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTETQVVIPDDGVEDPLSYKQ MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQTFKARLVAKGYTQREGVDYE+T SPVAMLK IRILLSIATFYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQASRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLY+DDILLIGNDVGYLTDVKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGEAQYVL
Subjt:  QFQMKDLGEAQYVL

TrEMBL top hitse value%identityAlignment
A0A5A7T2V9 Gag/pol protein6.3e-16994.9Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MR+HKPRSKLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTETQVVIPDDGVEDPLSYKQ MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQTFKARLVAKGYT++EGVDYE+T S VAMLK IRILLSIA FYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQASRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLY+DDILLIGNDVGYLTDVKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGE QYVL
Subjt:  QFQMKDLGEAQYVL

A0A5A7TYX5 Gag/pol protein3.1e-16894.9Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLT+TQVVIPDDGVEDPLSYK  MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQT KARLVAKGYTQREGVDYE+T SPVAMLK IRILLSIATFYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQAS SWNIRFDTAIKSY FDQNVDE C YKKINKGKVAFLVLY+DDILLIGNDVGYLT+VKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGE+QYVL
Subjt:  QFQMKDLGEAQYVL

A0A5A7TZD0 Gag/pol protein8.0e-17296.5Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MR+HKPRSKLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTETQVVIPDDGVEDPLSYKQ MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQTFKARLVAKGYTQREGVDYE+T SPVAMLK IRILLSIATFYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQASRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLY+DDILLIGNDVGYLTDVKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGEAQYVL
Subjt:  QFQMKDLGEAQYVL

A0A5A7UYE8 Gag/pol protein8.0e-17296.5Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MR+HKPRSKLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTETQVVIPDDGVEDPLSYKQ MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQTFKARLVAKGYTQREGVDYE+T SPVAMLK IRILLSIATFYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQASRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLY+DDILLIGNDVGYLTDVKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGEAQYVL
Subjt:  QFQMKDLGEAQYVL

A0A5D3CYF4 Gag/pol protein8.0e-17296.5Show/hide
Query:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM
        MR+HKPRSKLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGR+VSQPNRYLGLTETQVVIPDDGVEDPLSYKQ MNDVDKDQWVKAM
Subjt:  MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAM

Query:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG
        DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDS+GKVQTFKARLVAKGYTQREGVDYE+T SPVAMLK IRILLSIATFYDYEIWQMDVKTAFLNG
Subjt:  DLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNG

Query:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA
        NLEESIFMSQPEGFITQGQEQKVCKLNRSI GLKQASRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLY+DDILLIGNDVGYLTDVKAWLAA
Subjt:  NLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAA

Query:  QFQMKDLGEAQYVL
        QFQMKDLGEAQYVL
Subjt:  QFQMKDLGEAQYVL

SwissProt top hitse value%identityAlignment
P04146 Copia protein4.9e-4135.59Show/hide
Query:  PLSYKQTMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSI
        P S+ +     DK  W +A++ E+ +   N+ W +   PE    +  +W++  K +  G    +KARLVA+G+TQ+  +DYE+T +PVA +   R +LS+
Subjt:  PLSYKQTMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSI

Query:  ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVY--KKINKGKVAFLVLYI
           Y+ ++ QMDVKTAFLNG L+E I+M  P+G         VCKLN++I GLKQA+R W   F+ A+K   F  +  + C+Y   K N  +  +++LY+
Subjt:  ATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVY--KKINKGKVAFLVLYI

Query:  DDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL
        DD+++   D+  + + K +L  +F+M DL E ++ +
Subjt:  DDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-945.5e-6140.52Show/hide
Query:  NEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMP---RRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAMDLEMESMYF
        +E +++  +  + +    ++DE     + HP+Q        RRS R   +  RY   +   V+I DD   +P S K+ ++  +K+Q +KAM  EMES+  
Subjt:  NEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMP---RRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAMDLEMESMYF

Query:  NSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMS
        N  ++LV+LP+G +P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D+++  SPV  +  IR +LS+A   D E+ Q+DVKTAFL+G+LEE I+M 
Subjt:  NSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMS

Query:  QPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVY-KKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAAQFQMKDLG
        QPEGF   G++  VCKLN+S+ GLKQA R W ++FD+ +KS  + +   +PCVY K+ ++     L+LY+DD+L++G D G +  +K  L+  F MKDLG
Subjt:  QPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVY-KKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAAQFQMKDLG

Query:  EAQYVL
         AQ +L
Subjt:  EAQYVL

P92520 Uncharacterized mitochondrial protein AtMg008202.5e-1341.86Show/hide
Query:  WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIA
        W +AM  E++++  N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q EG+ + +T SPV     IR +L++A
Subjt:  WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.2e-4137.29Show/hide
Query:  DPLSYKQTMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILL
        +P +  Q + D   ++W  AM  E+ +   N  W+LV  P   V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY +T SPV     IRI+L
Subjt:  DPLSYKQTMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILL

Query:  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYI
         +A    + I Q+DV  AFL G L + ++MSQP GFI + +   VCKL +++ GLKQA R+W +     + +  F  +V +  ++       + ++++Y+
Subjt:  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYI

Query:  DDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL
        DDIL+ GND   L +    L+ +F +KD  E  Y L
Subjt:  DDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.3e-4136.86Show/hide
Query:  DPLSYKQTMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILL
        +P +  Q M D   D+W +AM  E+ +   N  W+LV   P  V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY +T SPV     IRI+L
Subjt:  DPLSYKQTMNDVDKDQWVKAMDLEMESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILL

Query:  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYI
         +A    + I Q+DV  AFL G L + ++MSQP GF+ + +   VC+L ++I GLKQA R+W +   T + +  F  ++ +  ++       + ++++Y+
Subjt:  SIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYI

Query:  DDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL
        DDIL+ GND   L      L+ +F +K+  +  Y L
Subjt:  DDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 84.2e-4840.36Show/hide
Query:  WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKT
        W  AMD E+ +M     WE+  LP   KPIGCKW+YK K +S G ++ +KARLVAKGYTQ+EG+D+ +T SPV  L  ++++L+I+  Y++ + Q+D+  
Subjt:  WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKT

Query:  AFLNGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYL
        AFLNG+L+E I+M  P G+   QG       VC L +SI GLKQASR W ++F   +  + F Q+  +   + KI       +++Y+DDI++  N+   +
Subjt:  AFLNGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYL

Query:  TDVKAWLAAQFQMKDLGEAQYVL
         ++K+ L + F+++DLG  +Y L
Subjt:  TDVKAWLAAQFQMKDLGEAQYVL

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)1.8e-1441.86Show/hide
Query:  WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIA
        W +AM  E++++  N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q EG+ + +T SPV     IR +L++A
Subjt:  WVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATCATAAACCACGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCAC
ATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGCAGTGGGAGAATTGTATCACAACCTAACCGTTATTTAGGTTTAACTGAAACTCAGGTTGTCATAC
CAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAAACAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAAT
TCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCATCTGGGAAGGTACAGACCTTCAAAGCTAG
ACTTGTAGCAAAAGGATATACCCAAAGGGAAGGGGTTGACTATGAGAAAACTTTGTCTCCTGTTGCTATGTTAAAGTTTATAAGGATTCTCTTGTCCATCGCCACATTTT
ATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAACCTGAGGGGTTCATAACCCAAGGTCAAGAG
CAAAAAGTTTGTAAGCTGAATCGATCCATTTGTGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACAATTTTGACCAAAACGT
TGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATATAGACGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACG
TTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTATGCTCTATGCCTCAGCTGTGGGCAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGATCATAAACCACGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCAC
ATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGCAGTGGGAGAATTGTATCACAACCTAACCGTTATTTAGGTTTAACTGAAACTCAGGTTGTCATAC
CAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAAACAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAAT
TCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCATCTGGGAAGGTACAGACCTTCAAAGCTAG
ACTTGTAGCAAAAGGATATACCCAAAGGGAAGGGGTTGACTATGAGAAAACTTTGTCTCCTGTTGCTATGTTAAAGTTTATAAGGATTCTCTTGTCCATCGCCACATTTT
ATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAACCTGAGGGGTTCATAACCCAAGGTCAAGAG
CAAAAAGTTTGTAAGCTGAATCGATCCATTTGTGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACAATTTTGACCAAAACGT
TGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATATAGACGATATCCTCCTCATTGGGAATGATGTGGGATACCTTACTGACG
TTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTATGCTCTATGCCTCAGCTGTGGGCAGCTTAA
Protein sequenceShow/hide protein sequence
MRDHKPRSKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRIVSQPNRYLGLTETQVVIPDDGVEDPLSYKQTMNDVDKDQWVKAMDLEMESMYFN
SVWELVDLPEGVKPIGCKWIYKRKRDSSGKVQTFKARLVAKGYTQREGVDYEKTLSPVAMLKFIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQE
QKVCKLNRSICGLKQASRSWNIRFDTAIKSYNFDQNVDEPCVYKKINKGKVAFLVLYIDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLCSMPQLWAA