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Cmc04g0092881 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0092881
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationCMiso1.1chr04:4843815..4844952
RNA-Seq ExpressionCmc04g0092881
SyntenyCmc04g0092881
Gene Ontology termsGO:0009061 - anaerobic respiration (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147861.1 uncharacterized protein LOC101222738 [Cucumis sativus]9.3e-7497.22Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEK N+GNNLQRSASMPPFNTRKGL EN+KSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_008466545.1 PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]9.9e-76100Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]7.9e-5780.14Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K+ E  GNNLQRS+S+PPFNTRKG L+ ++SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]2.7e-5780.82Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K+ E  GNNLQRS+S+PPFNTRKGLL+ ++SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]3.3e-6388.89Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFET EEK+ EN G NLQRSAS+PPF T KGLLE ++SE NLEKP+KN 
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLG GGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein4.5e-7497.22Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEK N+GNNLQRSASMPPFNTRKGL EN+KSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A1S3CST6 uncharacterized protein LOC1035039304.8e-76100Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A4.8e-76100Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A6J1FHE8 uncharacterized protein LOC1114457953.8e-5780.14Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K+ E  GNNLQRS+S+PPFNTRKG L+ ++SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A6J1J1T2 uncharacterized protein LOC1114810651.3e-5780.82Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K+ E  GNNLQRS+S+PPFNTRKGLL+ ++SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein1.4e-1944.2Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLE-----EKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEK
        MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK+  EE      S   T E      KEK++V +                L EN        +
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLE-----EKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEK

Query:  PEKNPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA
         + + WWR++ WAFLNEP E EG  N+YVSQF VA++A
Subjt:  PEKNPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACCGATCCCCAAGAAGTGAGTCATCGGAGGAATAAGTCATTGACGAAAGAGGAAATTGAAGCGTTTTGGAAAAC
GAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGAAAATGTTGGAAATAATCTACAGAGATCAGCCTCTA
TGCCTCCATTCAATACAAGGAAGGGTTTACTGGAGAATGTGAAATCTGAAACCAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTA
AACGAACCACCGGAGACAGAAGGGTCGGGTAACAGCTACGTGTCGCAGTTCCACGTTGCAAACATGGCGGCTTCCAGACTTGGCCGTGGTGGCGTCAGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
TCAAATAAAGTTTAATATTGTAAAGTTTTAGATAAGATCGGAGCCAAAAGAGATAAAGACACACTGCTCGCCAGACGCCAACTTTGTAATTCATCATATATATATATATA
TATATATATATTGCTGCTTCTTCTTACTAACAAACCATATTTATCTGACTTTCGAATTAAGAAAAAAAAAAGTTTGGTTTTTGAGTGATGGGTTCTTTAATGGCTGGTTG
GGATTCCCCTACTACCGATCCCCAAGAAGTGAGTCATCGGAGGAATAAGTCATTGACGAAAGAGGAAATTGAAGCGTTTTGGAAAACGAAGAAACAAGTGCATGAAGAAC
ATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGAAAATGTTGGAAATAATCTACAGAGATCAGCCTCTATGCCTCCATTCAATACAAGGAAG
GGTTTACTGGAGAATGTGAAATCTGAAACCAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGTAACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGG
GTCGGGTAACAGCTACGTGTCGCAGTTCCACGTTGCAAACATGGCGGCTTCCAGACTTGGCCGTGGTGGCGTCAGTGCTTAAGCAGCAATGTTAATTTCGTTCTTTTTTT
AATCTTTTGTTGCGTTGGTGACGGAGTCGGAGTGGGTGTGGATGTGATCGGAAAGAAAAAAACAAAATTAAAAGATTATGTTGTAAATTAATTGGATTTGAAGGGTGTGT
GTATGAGTGTTTGATATATATATATATGTATATATAATGTAAAATTATTGTTGTTTCTCATTTTTTGTTTTGTTTGT
Protein sequenceShow/hide protein sequence
MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENVKSETNLEKPEKNPWWRRSNWAFL
NEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA