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Cmc04g0093181 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093181
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDEAD-box ATP-dependent RNA helicase 32
Genome locationCMiso1.1chr04:5255905..5256787
RNA-Seq ExpressionCmc04g0093181
SyntenyCmc04g0093181
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033961.1 DEAD-box ATP-dependent RNA helicase 32 [Cucumis melo var. makuwa]4.8e-1352Show/hide
Query:  MIRIKLIGEFLLSTREYLVWLKSQ------------------------------------------GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
        MIRIKLIGEFLLSTREYLVWLKS                                           GEGKGRGK+A  REG VTCHM TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLLSTREYLVWLKSQ------------------------------------------GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF

KAA0035872.1 hypothetical protein E6C27_scaffold56G00360 [Cucumis melo var. makuwa]5.0e-1082.93Show/hide
Query:  LVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
        +V +  +GEGKGRGKLASDREGSVTCHM TQFCFRVYVSVF
Subjt:  LVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF

KAA0051087.1 transposase [Cucumis melo var. makuwa]2.0e-1144.04Show/hide
Query:  IKLIGEFLLSTREYLVWLKSQ------------------------------------------------------GEGKGRGKLASDREGSVTCHMETQF
        IKLIGEFLLS REY VWLKSQ                                                       EGKGRGKLASD+EGSVTCHM TQF
Subjt:  IKLIGEFLLSTREYLVWLKSQ------------------------------------------------------GEGKGRGKLASDREGSVTCHMETQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

KAA0059503.1 hypothetical protein E6C27_scaffold518G00070 [Cucumis melo var. makuwa]1.7e-10100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF

KAA0063966.1 hypothetical protein E6C27_scaffold616G001210 [Cucumis melo var. makuwa]1.7e-1085.37Show/hide
Query:  LVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
        +V +  QGEGKGRGKLASDREGSVTCHM TQFCFRVYVSVF
Subjt:  LVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF

TrEMBL top hitse value%identityAlignment
A0A5A7SWX3 DEAD-box ATP-dependent RNA helicase 322.3e-1352Show/hide
Query:  MIRIKLIGEFLLSTREYLVWLKSQ------------------------------------------GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
        MIRIKLIGEFLLSTREYLVWLKS                                           GEGKGRGK+A  REG VTCHM TQFCFRVYVSVF
Subjt:  MIRIKLIGEFLLSTREYLVWLKSQ------------------------------------------GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF

A0A5A7SXE7 Uncharacterized protein2.4e-1082.93Show/hide
Query:  LVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
        +V +  +GEGKGRGKLASDREGSVTCHM TQFCFRVYVSVF
Subjt:  LVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF

A0A5A7UUC1 Uncharacterized protein8.3e-11100Show/hide
Query:  GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
        GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
Subjt:  GEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF

A0A5A7VC05 Uncharacterized protein8.3e-1185.37Show/hide
Query:  LVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF
        +V +  QGEGKGRGKLASDREGSVTCHM TQFCFRVYVSVF
Subjt:  LVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF

A0A5D3CKP0 Transposase9.8e-1244.04Show/hide
Query:  IKLIGEFLLSTREYLVWLKSQ------------------------------------------------------GEGKGRGKLASDREGSVTCHMETQF
        IKLIGEFLLS REY VWLKSQ                                                       EGKGRGKLASD+EGSVTCHM TQF
Subjt:  IKLIGEFLLSTREYLVWLKSQ------------------------------------------------------GEGKGRGKLASDREGSVTCHMETQF

Query:  CFRVYVSVF
        C+R YVSVF
Subjt:  CFRVYVSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCAAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAG
AGAAGGATCCGTGACATGCCATATGGAGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTAGGATCAAGTTAATTGGAGAATTTTTACTGTCAACTAGGGAGTACCTTGTTTGGCTAAAATCTCAAGGCGAAGGTAAAGGTAGAGGAAAGCTGGCGAGCGACAG
AGAAGGATCCGTGACATGCCATATGGAGACTCAGTTTTGCTTCCGCGTTTATGTTTCAGTGTTTTAATATTCCATTTTTAATGAAAATTTATTCTTCCCTCGTTTCAAAA
AAGTGTCTCTTGT
Protein sequenceShow/hide protein sequence
MIRIKLIGEFLLSTREYLVWLKSQGEGKGRGKLASDREGSVTCHMETQFCFRVYVSVF