; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0093211 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093211
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPol
Genome locationCMiso1.1chr04:5315636..5317030
RNA-Seq ExpressionCmc04g0093211
SyntenyCmc04g0093211
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW50867.1 Copia protein [Vitis vinifera]2.7e-21577.32Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR
        T ++W+R N+V++NIFA+ VA +II  +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKP+G+KWVFVRKRNENNE+ RYKAR
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR

Query:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY
        LVAQGFSQ+PGIDYEETYSP++DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IYMKIPEGFK+P + N+  R + SIKLQRSLYGLKQSGRMWY
Subjt:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY

Query:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM
        N LSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLKKEFEMKDLGKTKFCLGLQIEH  + + +HQSTY + +LKRFYM
Subjt:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM

Query:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN
        DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLA+YSS+ T+ HWNG+KH+LRYLRGT DM LFYS +S 
Subjt:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN

Query:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          L+ YADAGYLSDPHK RSQTGY+F C GT ISWRSVKQTM ATSSNH+EILAIHEASREC+
Subjt:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

RVW51051.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]8.6e-21477.11Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR
        T ++W+R N+V++NIFA+ VA +II  +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKP+G+KWVFVRKRNENNE+ RYKAR
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR

Query:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY
        LVAQGFSQ+PG+DYEETYSP++DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IYMKIPEGFK+P + N+  R + SIKLQRSLYGLKQSGRMWY
Subjt:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY

Query:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM
        N LSEYLLKEGY NNPICPC+FIKK ++GFAIIAVYVDDLN++GTPEEL++   YLKKEFEMKDLGKTKFCLGLQIEH  + + +HQSTY + +LKRFYM
Subjt:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM

Query:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN
        DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSSS T+ HWNG+KH+LRYLRGT DM LFYS +S 
Subjt:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN

Query:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          L+ YADAGYLSDPHK RSQTGY+F   GT ISWRSVKQTM ATSSNH+EILAIHEASREC+
Subjt:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

RVW51062.1 Copia protein [Vitis vinifera]3.5e-21577.32Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR
        T ++W+R N+V++NIFA+ VA +II  +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKP+G+KWVFVRKRNENNE+ RYKAR
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR

Query:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY
        LVAQGFSQ+PGIDYEETYSP++DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IYMKIPEGFK+P + N+  R + SIKLQRSLYGLKQSGRMWY
Subjt:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY

Query:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM
        N LSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLKKEFEMKDLGKTKFCLGLQIEH  + + +HQSTY + +LKRFYM
Subjt:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM

Query:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN
        DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYL+AIGALMYLAN TRPDIAFSVNLLARYSS+ T+ HWNG+KH+LRYLRGT DM LFYS +S 
Subjt:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN

Query:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          L+ YADAGYLSDPHK RSQTGY+F C GT ISWRSVKQTM ATSSNH+EILAIHEASREC+
Subjt:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

RVW59049.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.6e-21577.54Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR
        T ++W+R N+V++NIFA+ VA +II  +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKP+G+KWVFVRKRNENNE+ RYKAR
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR

Query:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY
        LVAQGFSQ+PGIDYEETYSP++DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IYMKIPEGFK+P + N+  R + SIKLQRSLYGLKQSGRMWY
Subjt:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY

Query:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM
        N LSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLKKEFEMKDLGKTKFCLGLQIEH  + + +HQSTY + +LKRFYM
Subjt:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM

Query:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN
        DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+ T+ HWNG+KH+LRYLRGT DM LFYS +S 
Subjt:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN

Query:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          L+ YADAGYLSDPHK RSQTGY+F C GT ISWRSVKQTM ATSSNH+EILAIHEASREC+
Subjt:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

RVX16158.1 Copia protein [Vitis vinifera]3.9e-21477.11Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR
        T ++W+R N+V++NIFA+ VA +II  +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKP+G+KWVFVRKRNENNE+ RYKAR
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR

Query:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY
        LVAQGFSQ+PGIDYEETYSP++DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IYMKIPEGFK+P + N+  R + SIKLQRSLYGLKQSGRMWY
Subjt:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY

Query:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM
        N LSEYLLK+GY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLKKEFEMKDLGKTKFCLGLQIEH  + + +HQSTY + +LK FYM
Subjt:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM

Query:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN
        DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+ T+ HWNG+KH+LRYLRGT DM LFYS +S 
Subjt:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN

Query:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          L+ YADAGYLSDPHK RSQTGY+F C GT ISWRSVKQTM ATSSNH+EILAIHEASREC+
Subjt:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

TrEMBL top hitse value%identityAlignment
A0A2N9G9W6 Reverse transcriptase Ty1/copia-type domain-containing protein1.7e-21578.66Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENE-DYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKA
        T + W+R  +VVDNIF++ VA +I   N+ + EP++V++CR R DWPKWKEAIQAELNSL KREVFGP+V TP+GV P+G+KWVFVRKRNE NE+ RYKA
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENE-DYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKA

Query:  RLVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMW
        RLVAQGFSQ+PGIDYEETYSP++DAIT R+LISL V ENLDM LMDVVT YLYGSL+N+IYMKIPEG+K+P++YNS  R + SIKLQRSLYGLKQSGRMW
Subjt:  RLVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMW

Query:  YNCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFY
        YN LSEYLLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN++GTPEEL+K  +YLK EFEMKDLGKTKFCLGLQIEHL D I IHQSTYTE +LK F+
Subjt:  YNCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFY

Query:  MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKS
        MDKAHPL+ PMVVRSLDVKKD FRP+E  EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+ T  HWNGVKHVLRYLRGT DM LFY NKS
Subjt:  MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKS

Query:  NFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
        N  LV YADAGYLSDPHK RSQTGYLFTCG T ISWRSVKQT++ATSSNH+EI+AIHEASRECV
Subjt:  NFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

A0A2N9HZE8 Reverse transcriptase Ty1/copia-type domain-containing protein1.7e-21578.66Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENE-DYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKA
        T + W+R  +VVDNIF++ VA +I   N+ + EP++V++CR R DWPKWKEAIQAELNSL KREVFGP+V TP+GV P+G+KWVFVRKRNE NE+ RYKA
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENE-DYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKA

Query:  RLVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMW
        RLVAQGFSQ+PGIDYEETYSP++DAIT R+LISL V ENLDM LMDVVT YLYGSL+N+IYMKIPEG+K+P++YNS  R + SIKLQRSLYGLKQSGRMW
Subjt:  RLVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMW

Query:  YNCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFY
        YN LSEYLLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN++GTPEEL+K  +YLK EFEMKDLGKTKFCLGLQIEHL D I IHQSTYTE +LK F+
Subjt:  YNCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFY

Query:  MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKS
        MDKAHPL+ PMVVRSLDVKKD FRP+E  EE LGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+ T  HWNGVKHVLRYLRGT DM LFY NKS
Subjt:  MDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKS

Query:  NFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
        N  LV YADAGYLSDPHK RSQTGYLFTCG T ISWRSVKQT++ATSSNH+EI+AIHEASRECV
Subjt:  NFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

A0A438ET65 Copia protein1.3e-21577.32Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR
        T ++W+R N+V++NIFA+ VA +II  +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKP+G+KWVFVRKRNENNE+ RYKAR
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR

Query:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY
        LVAQGFSQ+PGIDYEETYSP++DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IYMKIPEGFK+P + N+  R + SIKLQRSLYGLKQSGRMWY
Subjt:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY

Query:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM
        N LSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLKKEFEMKDLGKTKFCLGLQIEH  + + +HQSTY + +LKRFYM
Subjt:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM

Query:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN
        DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLA+YSS+ T+ HWNG+KH+LRYLRGT DM LFYS +S 
Subjt:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN

Query:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          L+ YADAGYLSDPHK RSQTGY+F C GT ISWRSVKQTM ATSSNH+EILAIHEASREC+
Subjt:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

A0A438ETU3 Copia protein1.7e-21577.32Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR
        T ++W+R N+V++NIFA+ VA +II  +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKP+G+KWVFVRKRNENNE+ RYKAR
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR

Query:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY
        LVAQGFSQ+PGIDYEETYSP++DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IYMKIPEGFK+P + N+  R + SIKLQRSLYGLKQSGRMWY
Subjt:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY

Query:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM
        N LSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLKKEFEMKDLGKTKFCLGLQIEH  + + +HQSTY + +LKRFYM
Subjt:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM

Query:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN
        DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYL+AIGALMYLAN TRPDIAFSVNLLARYSS+ T+ HWNG+KH+LRYLRGT DM LFYS +S 
Subjt:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN

Query:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          L+ YADAGYLSDPHK RSQTGY+F C GT ISWRSVKQTM ATSSNH+EILAIHEASREC+
Subjt:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

A0A438FGC5 Retrovirus-related Pol polyprotein from transposon TNT 1-947.6e-21677.54Show/hide
Query:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR
        T ++W+R N+V++NIFA+ VA +II  +ED EP++V+ECR+R DWPKWKEAIQAELNSLTKREVFGPVV TP+ VKP+G+KWVFVRKRNENNE+ RYKAR
Subjt:  TEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKAR

Query:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY
        LVAQGFSQ+PGIDYEETYSP++DAIT R+LISLAV E LDM LMDV+T YLYGS++N+IYMKIPEGFK+P + N+  R + SIKLQRSLYGLKQSGRMWY
Subjt:  LVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWY

Query:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM
        N LSEYLLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLKKEFEMKDLGKTKFCLGLQIEH  + + +HQSTY + +LKRFYM
Subjt:  NCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYM

Query:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN
        DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TRPDIAFSVNLLARYSS+ T+ HWNG+KH+LRYLRGT DM LFYS +S 
Subjt:  DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSN

Query:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          L+ YADAGYLSDPHK RSQTGY+F C GT ISWRSVKQTM ATSSNH+EILAIHEASREC+
Subjt:  FDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-7035.47Show/hide
Query:  NRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQG
        N +N VV N      AH I ++     P S DE + R D   W+EAI  ELN+      +  +   P+    +  +WVF  K NE     RYKARLVA+G
Subjt:  NRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQG

Query:  FSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSE
        F+QK  IDYEET++P+    + R+++SL +  NL +H MDV T +L G+L+ EIYM++P+G       + N   +C  KL +++YGLKQ+ R W+    +
Subjt:  FSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSE

Query:  YLLKEGYQNNPICPCVFI--KKSQSGFAIIAVYVDDLNI-IGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDK
         L +  + N+ +  C++I  K + +    + +YVDD+ I  G    ++    YL ++F M DL + K  +G++IE   D+I++ QS Y + IL +F M+ 
Subjt:  YLLKEGYQNNPICPCVFI--KKSQSGFAIIAVYVDDLNI-IGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDK

Query:  AHPLNIPMVVRSLDVKKDIFRPREDNEELLGPE----VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNK
         + ++ P+             P + N ELL  +     P  S IG LMY+   TRPD+  +VN+L+RYSS      W  +K VLRYL+GTIDM L +   
Subjt:  AHPLNIPMVVRSLDVKKDIFRPREDNEELLGPE----VPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNK

Query:  SNFD--LVDYADAGYLSDPHKARSQTGYLFTC-GGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
          F+  ++ Y D+ +       +S TGYLF      +I W + +Q   A SS  AE +A+ EA RE +
Subjt:  SNFD--LVDYADAGYLSDPHKARSQTGYLFTC-GGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.3e-7638.64Show/hide
Query:  NEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITL
        ++D EP+S+ E  +  +  +  +A+Q E+ SL K   +  +V  PKG +P+  KWVF  K++ + ++ RYKARLV +GF QK GID++E +SP+V   ++
Subjt:  NEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITL

Query:  RYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICPCVFIKK-S
        R ++SLA   +L++  +DV T +L+G LE EIYM+ PEGF++    +     +C  KL +SLYGLKQ+ R WY     ++  + Y      PCV+ K+ S
Subjt:  RYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICPCVFIKK-S

Query:  QSGFAIIAVYVDDLNIIGTPEEL-SKAIEYLKKEFEMKDLGKTKFCLGLQI--EHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFR
        ++ F I+ +YVDD+ I+G  + L +K    L K F+MKDLG  +  LG++I  E  + ++++ Q  Y E +L+RF M  A P++ P+       KK    
Subjt:  QSGFAIIAVYVDDLNIIGTPEEL-SKAIEYLKKEFEMKDLGKTKFCLGLQI--EHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFR

Query:  PREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTG
        P    E+    +VPY SA+G+LMY    TRPDIA +V +++R+  +  K HW  VK +LRYLRGT    L +   S+  L  Y DA    D    +S TG
Subjt:  PREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTG

Query:  YLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV
        YLFT  G  ISW+S  Q   A S+  AE +A  E  +E +
Subjt:  YLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEASRECV

Q03619 Transposon Ty1-ER2 Gag-Pol polyprotein3.6e-2927.21Show/hide
Query:  KDWPKWKEAIQAELNSLTKREVFG-PVVYTPKGVKP---MGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYL-----ISL
        K+  K+ +A   E+N L K + +     Y  K + P   +   ++F RKR+       +KAR VA+G  Q P     +TY P + + T+ +      +SL
Subjt:  KDWPKWKEAIQAELNSLTKREVFG-PVVYTPKGVKP---MGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYL-----ISL

Query:  AVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKE-GYQNNPICPCVFIKKSQSGFAI
        A+  N  +  +D+ + YLY  ++ E+Y++ P    +             I+L++SLYGLKQSG  WY  +  YL+K+ G +      CVF K SQ     
Subjt:  AVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKE-GYQNNPICPCVFIKKSQSGFAI

Query:  IAVYVDDLNIIGTPEELS-KAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVR----------SLDVKKDI
        I ++VDD+ +       + K I  LKK+++ K +   +    +Q + L  EI   +  Y +  ++    +K   LN+P+  +           L + +  
Subjt:  IAVYVDDLNIIGTPEELS-KAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVR----------SLDVKKDI

Query:  FRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSN----KSNFDLVDYADAGYLSDPHK
            ED+ ++   E+  L  IG   Y+    R D+ + +N LA++    +K   +    +++++  T D  L +      K    LV  +DA Y + P+ 
Subjt:  FRPREDNEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSN----KSNFDLVDYADAGYLSDPHK

Query:  ARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEA
         +SQ G ++   G VI  +S K ++T TS+  AEI AI E+
Subjt:  ARSQTGYLFTCGGTVISWRSVKQTMTATSSNHAEILAIHEA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.7e-5832.69Show/hide
Query:  KWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDV
        +W+ A+ +E+N+      +  V   P  V  +G +W+F +K N +  + RYKARLVA+G++Q+PG+DY ET+SP++ + ++R ++ +AV  +  +  +DV
Subjt:  KWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDV

Query:  VTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGT-
           +L G+L +++YM  P GF I K      R     KL+++LYGLKQ+ R WY  L  YLL  G+ N+     +F+ +       + VYVDD+ I G  
Subjt:  VTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGT-

Query:  PEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGAL
        P  L   ++ L + F +KD  +  + LG++ + +   + + Q  Y  ++L R  M  A P+  PM   +   K  ++       +L  P   Y   +G+L
Subjt:  PEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGAL

Query:  MYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTAT
         YLA  TRPDI+++VN L+++    T+ H   +K +LRYL GT +  +F    +   L  Y+DA +  D     S  GY+   G   ISW S KQ     
Subjt:  MYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTAT

Query:  SSNHAEILAIHEASRE
        SS  AE  ++   S E
Subjt:  SSNHAEILAIHEASRE

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-5932.69Show/hide
Query:  KWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDV
        +W++A+ +E+N+      +  V   P  V  +G +W+F +K N +  + RYKARLVA+G++Q+PG+DY ET+SP++ + ++R ++ +AV  +  +  +DV
Subjt:  KWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDV

Query:  VTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTP
           +L G+L +E+YM  P GF + K      R     +L++++YGLKQ+ R WY  L  YLL  G+ N+     +F+ +       + VYVDD+ I G  
Subjt:  VTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTP

Query:  EELSK-AIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGAL
          L K  ++ L + F +K+     + LG++ + +   + + Q  YT ++L R  M  A P+  PM            +    +   L     Y   +G+L
Subjt:  EELSK-AIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGAL

Query:  MYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTAT
         YLA  TRPD++++VN L++Y    T  HWN +K VLRYL GT D  +F    +   L  Y+DA +  D     S  GY+   G   ISW S KQ     
Subjt:  MYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVKQTMTAT

Query:  SSNHAEILAIHEASRE
        SS  AE  ++   S E
Subjt:  SSNHAEILAIHEASRE

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.4e-5832.03Show/hide
Query:  EPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYLI
        EP + +E    K++  W  A+  E+ ++     +  +   P   KP+G KWV+  K N +  + RYKARLVA+G++Q+ GID+ ET+SP+    +++ ++
Subjt:  EPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYLI

Query:  SLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICPCVFIKKSQSGFA
        +++   N  +H +D+   +L G L+ EIYMK+P G+   +  +     +C +K  +S+YGLKQ+ R W+   S  L+  G+  +      F+K + + F 
Subjt:  SLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICPCVFIKKSQSGFA

Query:  IIAVYVDDLNIIGTPE-ELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPM---VVRSLDVKKDIFRPRED
         + VYVDD+ I    +  + +    LK  F+++DLG  K+ LGL+I   A  I I Q  Y  ++L    +    P ++PM   V  S     D    +  
Subjt:  IIAVYVDDLNIIGTPE-ELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPM---VVRSLDVKKDIFRPRED

Query:  NEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFT
                  Y   IG LMYL   TR DI+F+VN L+++S +    H   V  +L Y++GT+   LFYS+++   L  ++DA + S     RS  GY   
Subjt:  NEELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFT

Query:  CGGTVISWRSVKQTMTATSSNHAEILAIHEASRE
         G ++ISW+S KQ + + SS  AE  A+  A+ E
Subjt:  CGGTVISWRSVKQTMTATSSNHAEILAIHEASRE

ATMG00240.1 Gag-Pol-related retrotransposon family protein5.0e-1041.77Show/hide
Query:  MYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGY
        MYL   TRPD+ F+VN L+++SS+        V  VL Y++GT+   LFYS  S+  L  +AD+ + S P   RS TG+
Subjt:  MYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGY

ATMG00810.1 DNA/RNA polymerases superfamily protein4.4e-2229.82Show/hide
Query:  IAVYVDDLNIIGTPEE-LSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEEL
        + +YVDD+ + G+    L+  I  L   F MKDLG   + LG+QI+     +F+ Q+ Y E IL    M    P++ P+             P + N  +
Subjt:  IAVYVDDLNIIGTPEE-LSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEEL

Query:  LGPEVP----YLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFT
           + P    + S +GAL YL   TRPDI+++VN++ +     T   ++ +K VLRY++GTI   L+    S  ++  + D+ +       RS TG+   
Subjt:  LGPEVP----YLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFT

Query:  CGGTVISWRSVKQTMTATSSNHAEILAI
         G  +ISW + +Q   + SS   E  A+
Subjt:  CGGTVISWRSVKQTMTATSSNHAEILAI

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)2.4e-1241.75Show/hide
Query:  EPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYLI
        EPKSV      KD P W +A+Q EL++L++ + +  +V  P     +G KWVF  K + +  + R KARLVA+GF Q+ GI + ETYSP+V   T+R ++
Subjt:  EPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQKPGIDYEETYSPMVDAITLRYLI

Query:  SLA
        ++A
Subjt:  SLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAAAAAAGGTGGAATAGAATTAATGTAGTTGTGGACAACATTTTTGCGTATAATGTTGCACATAATATCATTCATGAAAATGAGGATTATGAACCTAAATCTGT
TGACGAATGTCGTAATAGAAAGGATTGGCCCAAGTGGAAAGAAGCCATCCAAGCAGAACTAAACTCACTCACGAAACGTGAAGTTTTTGGACCTGTAGTTTATACACCTA
AAGGTGTAAAACCTATGGGATTTAAATGGGTATTTGTGCGTAAACGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTCTCTCAAAAA
CCAGGCATTGATTATGAGGAAACATATTCTCCTATGGTGGATGCTATTACATTAAGATATTTAATTAGTCTGGCTGTATGTGAAAATCTTGATATGCATCTTATGGATGT
AGTTACAACATACTTATATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACCTAAATCATATAATTCAAACTTTAGAGAATTATGTTCAA
TCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATTGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCA
TGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCTGAAGAGCTTTCAAAGGCAATAGAATATCT
CAAAAAGGAATTTGAAATGAAAGATCTTGGTAAGACAAAATTTTGCCTTGGCTTACAAATCGAGCATTTAGCCGATGAGATTTTTATTCATCAATCAACATATACAGAAA
ATATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATGTAAAAAAGGATATCTTTCGACCTCGAGAAGATAATGAA
GAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAGCATTTTCAGTAAATTTGTTAGCAAGATA
TAGTTCTTCTCAAACAAAAATACATTGGAATGGAGTTAAGCATGTACTTCGTTATCTTCGAGGGACAATTGATATGAGTTTGTTTTATTCAAATAAATCAAACTTTGATC
TAGTTGATTATGCGGATGCTGGATATTTATCTGATCCACACAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGTTATATCTTGGCGATCTGTAAAG
CAAACCATGACGGCCACTTCATCGAATCATGCAGAAATTCTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAAAAAAGGTGGAATAGAATTAATGTAGTTGTGGACAACATTTTTGCGTATAATGTTGCACATAATATCATTCATGAAAATGAGGATTATGAACCTAAATCTGT
TGACGAATGTCGTAATAGAAAGGATTGGCCCAAGTGGAAAGAAGCCATCCAAGCAGAACTAAACTCACTCACGAAACGTGAAGTTTTTGGACCTGTAGTTTATACACCTA
AAGGTGTAAAACCTATGGGATTTAAATGGGTATTTGTGCGTAAACGAAATGAAAATAATGAGGTCACTAGATATAAAGCACGACTTGTTGCACAAGGATTCTCTCAAAAA
CCAGGCATTGATTATGAGGAAACATATTCTCCTATGGTGGATGCTATTACATTAAGATATTTAATTAGTCTGGCTGTATGTGAAAATCTTGATATGCATCTTATGGATGT
AGTTACAACATACTTATATGGATCTTTGGAAAATGAAATCTATATGAAAATCCCTGAAGGATTTAAGATACCTAAATCATATAATTCAAACTTTAGAGAATTATGTTCAA
TCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATTGCTTAAGTGAATATTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCA
TGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCTGAAGAGCTTTCAAAGGCAATAGAATATCT
CAAAAAGGAATTTGAAATGAAAGATCTTGGTAAGACAAAATTTTGCCTTGGCTTACAAATCGAGCATTTAGCCGATGAGATTTTTATTCATCAATCAACATATACAGAAA
ATATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATGTAAAAAAGGATATCTTTCGACCTCGAGAAGATAATGAA
GAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAAGACCAGATATAGCATTTTCAGTAAATTTGTTAGCAAGATA
TAGTTCTTCTCAAACAAAAATACATTGGAATGGAGTTAAGCATGTACTTCGTTATCTTCGAGGGACAATTGATATGAGTTTGTTTTATTCAAATAAATCAAACTTTGATC
TAGTTGATTATGCGGATGCTGGATATTTATCTGATCCACACAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGTTATATCTTGGCGATCTGTAAAG
CAAACCATGACGGCCACTTCATCGAATCATGCAGAAATTCTTGCAATTCATGAAGCTAGTAGAGAATGTGTATGA
Protein sequenceShow/hide protein sequence
MTEKRWNRINVVVDNIFAYNVAHNIIHENEDYEPKSVDECRNRKDWPKWKEAIQAELNSLTKREVFGPVVYTPKGVKPMGFKWVFVRKRNENNEVTRYKARLVAQGFSQK
PGIDYEETYSPMVDAITLRYLISLAVCENLDMHLMDVVTTYLYGSLENEIYMKIPEGFKIPKSYNSNFRELCSIKLQRSLYGLKQSGRMWYNCLSEYLLKEGYQNNPICP
CVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLADEIFIHQSTYTENILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNE
ELLGPEVPYLSAIGALMYLANNTRPDIAFSVNLLARYSSSQTKIHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVDYADAGYLSDPHKARSQTGYLFTCGGTVISWRSVK
QTMTATSSNHAEILAIHEASRECV