; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0093351 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093351
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationCMiso1.1chr04:5530482..5531138
RNA-Seq ExpressionCmc04g0093351
SyntenyCmc04g0093351
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032842.1 hypothetical protein E6C27_scaffold1987G00140 [Cucumis melo var. makuwa]3.2e-10286.24Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        MSKGFKVNESDKCIYYK EGRLC+IICLYVDDMLIFGSNLHVINDVKSML  NFDMKDL E DVIL IKITR ENGIS+DQSHYIEKILKKYNYF+SKPA
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLFKN GDSVNQ EYASI+ SLRYA DC R +IAY +GLLCRFTSRPSLEHWNAIERVMRYLKK QNL LHYNKF AVLEGY+DADWNS   
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        DSKATSGYIFNIAG  VA
Subjt:  DSKATSGYIFNIAGGAVA

KAA0058878.1 putative polyprotein [Cucumis melo var. makuwa]6.7e-10082.57Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        MSKGFKVNESDKC+YYKT+GRLC+IICLYVDDML F SNLHVINDVKSML  NFDMKDL E D+IL IKITRT+NGIS+DQS+YIEKILKKYNYF+SKPA
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLFKN GD+VNQ EY SI+ SLRY  DC R +IAY +GLLCRFTSRP LEHWNAIER+MRYLKKTQNL LHYNKFS VLEGY+D DWNSL  
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        DSKATSGYIFNIAGG VA
Subjt:  DSKATSGYIFNIAGGAVA

KAA0060459.1 hypothetical protein E6C27_scaffold22G002870 [Cucumis melo var. makuwa]3.8e-10387.16Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        MSKGFKVNESDKCIYYKTEGRLC+IICLYVDDMLIFGSNLHVINDVKSML  NFDMKDL E DVIL IKITRTENGI +DQSHYIEK LKKYNYF+SKP 
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLFKN GDSVNQ EYASI+ SLRYA D  R +IAY +GLLCRFTSRPSLEHWNAIERVMRYLKKTQNL LHYNKF  VLEGYSDADWNSL  
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        DSKATSGYIFNIAGGAVA
Subjt:  DSKATSGYIFNIAGGAVA

TYK00058.1 hypothetical protein E5676_scaffold596G00040 [Cucumis melo var. makuwa]2.1e-10186.24Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        MSKGFKVNESD+CIYYKTEGR+C+IICLYVDDMLIFGSNLH+INDVKSML ANFDMKDL E DVIL IKI RTENGIS+DQSHYIEKILKKYNYFESKPA
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLFKN GDSVNQ EYASI+ SLRYA DC R +IAYTIGLLCRFTSR SLEHWNAIERVMRYLKKTQNL LHYNKFS VLEGY DADWNSL  
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        DSKA SGYIF I   AVA
Subjt:  DSKATSGYIFNIAGGAVA

TYK06419.1 hypothetical protein E5676_scaffold163G001210 [Cucumis melo var. makuwa]4.6e-10183.94Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        +SKGFKVNESDKCIYYKTEGRLC+IICLYVDD+LIFGSNL+VINDVKSML  NFDMK+L E DVIL IKITRT+NGIS+DQSHYIEKILKKYNYF+SKP 
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLF+N GDSVNQ EYASI+ SLRYA DC R +IAY +GLLCRFTSRPSLEHWN IER++RYLKKTQNL LHYNKF AVLEGY DADWNSL  
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        +SKATSGYIFNIAGGAVA
Subjt:  DSKATSGYIFNIAGGAVA

TrEMBL top hitse value%identityAlignment
A0A5A7SNZ1 Reverse transcriptase Ty1/copia-type domain-containing protein1.6e-10286.24Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        MSKGFKVNESDKCIYYK EGRLC+IICLYVDDMLIFGSNLHVINDVKSML  NFDMKDL E DVIL IKITR ENGIS+DQSHYIEKILKKYNYF+SKPA
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLFKN GDSVNQ EYASI+ SLRYA DC R +IAY +GLLCRFTSRPSLEHWNAIERVMRYLKK QNL LHYNKF AVLEGY+DADWNS   
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        DSKATSGYIFNIAG  VA
Subjt:  DSKATSGYIFNIAGGAVA

A0A5D3BLQ7 Reverse transcriptase Ty1/copia-type domain-containing protein1.0e-10186.24Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        MSKGFKVNESD+CIYYKTEGR+C+IICLYVDDMLIFGSNLH+INDVKSML ANFDMKDL E DVIL IKI RTENGIS+DQSHYIEKILKKYNYFESKPA
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLFKN GDSVNQ EYASI+ SLRYA DC R +IAYTIGLLCRFTSR SLEHWNAIERVMRYLKKTQNL LHYNKFS VLEGY DADWNSL  
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        DSKA SGYIF I   AVA
Subjt:  DSKATSGYIFNIAGGAVA

A0A5D3C7T6 Reverse transcriptase Ty1/copia-type domain-containing protein2.2e-10183.94Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        +SKGFKVNESDKCIYYKTEGRLC+IICLYVDD+LIFGSNL+VINDVKSML  NFDMK+L E DVIL IKITRT+NGIS+DQSHYIEKILKKYNYF+SKP 
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLF+N GDSVNQ EYASI+ SLRYA DC R +IAY +GLLCRFTSRPSLEHWN IER++RYLKKTQNL LHYNKF AVLEGY DADWNSL  
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        +SKATSGYIFNIAGGAVA
Subjt:  DSKATSGYIFNIAGGAVA

A0A5D3D4T4 Reverse transcriptase Ty1/copia-type domain-containing protein1.8e-10387.16Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        MSKGFKVNESDKCIYYKTEGRLC+IICLYVDDMLIFGSNLHVINDVKSML  NFDMKDL E DVIL IKITRTENGI +DQSHYIEK LKKYNYF+SKP 
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLFKN GDSVNQ EYASI+ SLRYA D  R +IAY +GLLCRFTSRPSLEHWNAIERVMRYLKKTQNL LHYNKF  VLEGYSDADWNSL  
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        DSKATSGYIFNIAGGAVA
Subjt:  DSKATSGYIFNIAGGAVA

A0A5D3DJH9 Putative polyprotein3.2e-10082.57Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        MSKGFKVNESDKC+YYKT+GRLC+IICLYVDDML F SNLHVINDVKSML  NFDMKDL E D+IL IKITRT+NGIS+DQS+YIEKILKKYNYF+SKPA
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK
         TPYDSSVKLFKN GD+VNQ EY SI+ SLRY  DC R +IAY +GLLCRFTSRP LEHWNAIER+MRYLKKTQNL LHYNKFS VLEGY+D DWNSL  
Subjt:  YTPYDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNIAGGAVA
        DSKATSGYIFNIAGG VA
Subjt:  DSKATSGYIFNIAGGAVA

SwissProt top hitse value%identityAlignment
P04146 Copia protein9.6e-2532.55Show/hide
Query:  VNES-DKCIYYKTEGRL--CLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTP
        VN S D+CIY   +G +   + + LYVDD++I   ++  +N+ K  L   F M DL+E+   + I+I   E+ I + QS Y++KIL K+N        TP
Subjt:  VNES-DKCIYYKTEGRL--CLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTP

Query:  YDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNK---FSAVLEGYSDADWNSLPK
          S +       D        S++  L Y   C R ++   + +L R++S+ + E W  ++RV+RYLK T +++L + K   F   + GY D+DW     
Subjt:  YDSSVKLFKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNK---FSAVLEGYSDADWNSLPK

Query:  DSKATSGYIFNI
        D K+T+GY+F +
Subjt:  DSKATSGYIFNI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.3e-3336.82Show/hide
Query:  SDKCIYYK--TEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKIT--RTENGISVDQSHYIEKILKKYNYFESKPAYTPYD
        SD C+Y+K  +E    +I+ LYVDDMLI G +  +I  +K  L  +FDMKDL     IL +KI   RT   + + Q  YIE++L+++N   +KP  TP  
Subjt:  SDKCIYYK--TEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKIT--RTENGISVDQSHYIEKILKKYNYFESKPAYTPYD

Query:  SSVKLFKNI-------GDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSL
          +KL K +         ++ +  Y+S V SL YA  C R +IA+ +G++ RF   P  EHW A++ ++RYL+ T    L +     +L+GY+DAD    
Subjt:  SSVKLFKNI-------GDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSL

Query:  PKDSKATSGYIFNIAGGAVA
          + K+++GY+F  +GGA++
Subjt:  PKDSKATSGYIFNIAGGAVA

P92519 Uncharacterized mitochondrial protein AtMg008102.3e-1829.57Show/hide
Query:  LIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTPYDSSVKLFKNIGDSVNQFEY
        + + LYVDD+L+ GS+  ++N +   L + F MKDL  V   L I+I    +G+ + Q+ Y E+IL      + KP  TP    +    +     +  ++
Subjt:  LIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTPYDSSVKLFKNIGDSVNQFEY

Query:  ASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSLPKDSKATSGY
         SIV +L+Y T   R +I+Y + ++C+    P+L  ++ ++RV+RY+K T    L+ +K S + ++ + D+DW       ++T+G+
Subjt:  ASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSLPKDSKATSGY

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.0e-2333.17Show/hide
Query:  GFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTP
        GF  + SD  ++    G+  + + +YVDD+LI G++  ++++    L   F +KD  E+   L I+  R   G+ + Q  YI  +L + N   +KP  TP
Subjt:  GFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTP

Query:  YDSSVKLFKNIGDSV-NQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSLPKD
           S KL    G  + +  EY  IV SL+Y     R +I+Y +  L +F   P+ EH  A++R++RYL  T N  +   K + + L  YSDADW     D
Subjt:  YDSSVKLFKNIGDSV-NQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSLPKD

Query:  SKATSGYI
          +T+GYI
Subjt:  SKATSGYI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.4e-2331.28Show/hide
Query:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA
        ++ GF  + SD  ++    GR  + + +YVDD+LI G++  ++      L   F +K+  ++   L I+  R   G+ + Q  Y   +L + N   +KP 
Subjt:  MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPA

Query:  YTPYDSSVKLFKNIGDSV-NQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSL
         TP  +S KL  + G  + +  EY  IV SL+Y     R +++Y +  L ++   P+ +HWNA++RV+RYL  T +  +   K + + L  YSDADW   
Subjt:  YTPYDSSVKLFKNIGDSV-NQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSL

Query:  PKDSKATSGYI
          D  +T+GYI
Subjt:  PKDSKATSGYI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-2028.99Show/hide
Query:  GFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTP
        GF  + SD   + K    L L + +YVDD++I  +N   ++++KS L + F ++DL  +   L ++I R+  GI++ Q  Y   +L +      KP+  P
Subjt:  GFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTP

Query:  YDSSVKLFKNI-GDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSLPKD
         D SV    +  GD V+   Y  ++  L Y     R +I++ +  L +F+  P L H  A+ +++ Y+K T    L Y+  + + L+ +SDA + S    
Subjt:  YDSSVKLFKNI-GDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSLPKD

Query:  SKATSGY
         ++T+GY
Subjt:  SKATSGY

ATMG00810.1 DNA/RNA polymerases superfamily protein1.6e-1929.57Show/hide
Query:  LIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTPYDSSVKLFKNIGDSVNQFEY
        + + LYVDD+L+ GS+  ++N +   L + F MKDL  V   L I+I    +G+ + Q+ Y E+IL      + KP  TP    +    +     +  ++
Subjt:  LIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTPYDSSVKLFKNIGDSVNQFEY

Query:  ASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSLPKDSKATSGY
         SIV +L+Y T   R +I+Y + ++C+    P+L  ++ ++RV+RY+K T    L+ +K S + ++ + D+DW       ++T+G+
Subjt:  ASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAV-LEGYSDADWNSLPKDSKATSGY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAAGGATTCAAAGTAAATGAGAGTGACAAATGTATCTACTATAAGACTGAAGGTAGGTTATGTCTTATTATATGCCTATACGTAGATGACATGTTAATCTTTGG
ATCAAACTTGCACGTCATAAATGATGTAAAATCTATGTTGGGTGCAAACTTTGACATGAAAGACCTAAGTGAAGTAGATGTAATCTTAGACATCAAAATTACAAGAACTG
AAAATGGAATTTCCGTAGATCAATCTCATTACATAGAAAAGATTCTAAAAAAGTACAACTACTTTGAAAGTAAACCAGCTTATACACCTTATGACTCTAGTGTGAAATTA
TTCAAGAACATTGGTGATAGTGTTAACCAATTCGAGTACGCTAGTATCGTAAGTAGTTTGAGGTATGCTACTGATTGCATTAGACAAAACATAGCTTACACCATAGGACT
ACTATGTAGATTTACCAGCAGACCCAGTCTAGAACACTGGAATGCAATAGAGAGAGTAATGAGATACCTTAAGAAAACCCAAAACCTGGAATTACATTATAATAAATTTT
CTGCTGTACTTGAAGGTTACAGCGATGCTGATTGGAACTCCCTCCCAAAGGACTCAAAGGCTACAAGTGGCTATATTTTTAATATAGCAGGAGGAGCTGTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAAGGATTCAAAGTAAATGAGAGTGACAAATGTATCTACTATAAGACTGAAGGTAGGTTATGTCTTATTATATGCCTATACGTAGATGACATGTTAATCTTTGG
ATCAAACTTGCACGTCATAAATGATGTAAAATCTATGTTGGGTGCAAACTTTGACATGAAAGACCTAAGTGAAGTAGATGTAATCTTAGACATCAAAATTACAAGAACTG
AAAATGGAATTTCCGTAGATCAATCTCATTACATAGAAAAGATTCTAAAAAAGTACAACTACTTTGAAAGTAAACCAGCTTATACACCTTATGACTCTAGTGTGAAATTA
TTCAAGAACATTGGTGATAGTGTTAACCAATTCGAGTACGCTAGTATCGTAAGTAGTTTGAGGTATGCTACTGATTGCATTAGACAAAACATAGCTTACACCATAGGACT
ACTATGTAGATTTACCAGCAGACCCAGTCTAGAACACTGGAATGCAATAGAGAGAGTAATGAGATACCTTAAGAAAACCCAAAACCTGGAATTACATTATAATAAATTTT
CTGCTGTACTTGAAGGTTACAGCGATGCTGATTGGAACTCCCTCCCAAAGGACTCAAAGGCTACAAGTGGCTATATTTTTAATATAGCAGGAGGAGCTGTTGCTTGA
Protein sequenceShow/hide protein sequence
MSKGFKVNESDKCIYYKTEGRLCLIICLYVDDMLIFGSNLHVINDVKSMLGANFDMKDLSEVDVILDIKITRTENGISVDQSHYIEKILKKYNYFESKPAYTPYDSSVKL
FKNIGDSVNQFEYASIVSSLRYATDCIRQNIAYTIGLLCRFTSRPSLEHWNAIERVMRYLKKTQNLELHYNKFSAVLEGYSDADWNSLPKDSKATSGYIFNIAGGAVA