CuGenDBv2

Gene ID	Cmc04g0093471
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:5672691..5674897
RNA-Seq Expression	Cmc04g0093471
Synteny	Cmc04g0093471
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037291.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.69

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKI+AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRK+SHSAALITRQAPLHRDLER EIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPS   +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELLSEAHSSPFSMHPG+TKMYQDLKRVYWWR+MKR+VAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDG+TERLNQVL+DMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEFAYNNSYQATIGMAPFEALYG+CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

KAA0040695.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.24

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSGYHQLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYR+FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFER LCVPSD  +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        K AHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEFAYNNSYQATIGMAPFEALYG+CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.79

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSD V+KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEF YNNSYQATIGMAPFEALYG+CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.38

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGL FE RLCVPSD  +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEFAYNNSYQATIGMAPFEALYG+CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

94.51

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSD  +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEFAYNNSYQATIGMAPFEALY +CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T6R9 Reverse transcriptase

0.0e+00

93.69

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKI+AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG PFVWSKACEDSFQ LKQKLVTAPVLTVPDGS SFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKS KYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRK+SHSAALITRQAPLHRDLER EIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPS   +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELLSEAHSSPFSMHPG+TKMYQDLKRVYWWR+MKR+VAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQ AMGTRLDFSTAFHPQTDG+TERLNQVL+DMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEFAYNNSYQATIGMAPFEALYG+CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

A0A5A7TGX4 Reverse transcriptase

0.0e+00

94.24

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFS+IDLRSGYHQLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTL DNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGW RPSTVSEVRSFLGLAGYYR+FVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTV DGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ AEFSLSSDGGLLFER LCVPSD  +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELLSEAHSSPFSMHPGSTKMYQDLKRVYWW NMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        K AHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVS+RDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEFAYNNSYQATIGMAPFEALYG+CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

A0A5A7U330 Reverse transcriptase

0.0e+00

94.79

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSD V+KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELLSEAHSSPFSMHPGSTKMY+D+KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEF YNNSYQATIGMAPFEALYG+CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

A0A5A7UAA8 Reverse transcriptase

0.0e+00

94.38

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRP+VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGY+QLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA 
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGL FE RLCVPSD  +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELL EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVK PRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ DGQTERLNQVLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEFAYNNSYQATIGMAPFEALYG+CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

A0A5A7UP94 Pol protein

0.0e+00

94.51

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKDED+PK
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
        TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
        VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSR ATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
        GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA
Subjt:  GCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADA

Query:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT
        LSRKVSHSAALITRQAPLHRDLERAEIAVSVG VTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSD  +KT
Subjt:  LSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKT

Query:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT
        ELL+EAHSSPFSMHPGSTKMYQDLKR+YWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV                        LT
Subjt:  ELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV------------------------LT

Query:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH
        KSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFPGSWDSHLH
Subjt:  KSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLH

Query:  LMEFAYNNSYQATIGMAPFEALYGRCCRS
        LMEFAYNNSYQATIGMAPFEALY +CCRS
Subjt:  LMEFAYNNSYQATIGMAPFEALYGRCCRS

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.0e-116

31.92

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--

Query:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++               
Subjt:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------

Query:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
                 +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
         P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT35 Transposon Tf2-2 polyprotein

2.0e-116

31.92

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--

Query:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++               
Subjt:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------

Query:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
                 +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
         P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT36 Transposon Tf2-3 polyprotein

2.0e-116

31.92

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--

Query:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++               
Subjt:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------

Query:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
                 +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
         P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT37 Transposon Tf2-4 polyprotein

2.0e-116

31.92

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Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--

Query:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++               
Subjt:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------

Query:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
                 +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
         P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT41 Transposon Tf2-12 polyprotein

2.0e-116

31.92

Show/hide

Query:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK
        + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K
Subjt:  MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPK

Query:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG
         AFR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ L++  L    +KCEF   QV F+G+ +S+ G
Subjt:  TAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG

Query:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL
         +     I+ V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + +KQ LV+ PVL   D S   ++ +DAS   +
Subjt:  VSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGL

Query:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP
        G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P
Subjt:  GCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHP

Query:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--
        G AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    +  E ++    GLL   +  
Subjt:  GKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--

Query:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------
        + +P+D  +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  WE++               
Subjt:  LCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENV---------------

Query:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE
                 +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR     
Subjt:  --------LTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALE

Query:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
         P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  FPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.4e-27

45.8

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Query:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW
        HL MVLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W
Subjt:  HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVW

Query:  SKACEDSFQTLKQKLVTAPVLTVPDGSGSFV
        ++    +F+ LK  + T PVL +PD    FV
Subjt:  SKACEDSFQTLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCCCCGCAGAATTGAAAGAACTGAAGGTACAGTTACAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTCTTATTCGTTAA
GAAGAAGGATGGGTCGATGCGGCTATGCATTGACTATAGGGAGTTGAACAAAGTAACGGTAAAGAACAGATATCCCTTACCCAGGATAGACGATCTATTTGACCAGTTAC
AGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCAGGATACCATCAGCTGAGGATTAAGGATGAGGATATACCGAAGACGGCATTTCGATCCAGATATGGACACTAC
GAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTCAGGGAGTTCCTAGATACTTTCGTGATTGTGTTTATCGA
CGATATCTTGATATACTCTAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTACGCAAAGTTCTCGAAGTGCGAGT
TTTGGCTGAAACAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACTGGTTGGACCCGACCTTCCACAGTC
AGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACAAGAAAGGGAGCTCCTTT
TGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCACCAGTCCTCACGGTACCCGATGGTTCTGGCAGTTTCGTGATTTATAGTG
ATGCTTCCAAGAAAGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTA
GAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAA
AGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGACTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGGA
AAGTATCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGACAGTTACTATGCAGTTAGCCCAG
TTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTC
GTTATCCTCTGATGGTGGACTGTTATTTGAGAGACGCCTCTGTGTTCCGTCAGATGGTGTGATTAAGACAGAATTATTATCGGAGGCGCACAGCTCCCCATTTTCCATGC
ACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGAGTTTATTGGTGGCGTAACATGAAGAGAGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTATGTCAGCAGGTT
AAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAGCCTTTGAGCATACCGGAATGGAAGTGGGAGAACGTACTTACTAAATCAGCGCACTTCGTTCCGGGTAAATCCAC
CTATACTGCTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTTT
GGAAGGGTTTACAGACTGCTATGGGCACGAGGTTGGACTTTAGTACGGCCTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAGGTTTTAGAGGATATGTTA
CGGGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCGTTTGAGGC
CCTGTACGGCAGATGTTGTAGATCCCGGTTTGCTGGGGTGAGGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDIPKTAFRSRYGHY
EFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTV
SEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDL
ELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGTVTMQLAQ
LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDGVIKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQV
KAPRQKPAGLLQPLSIPEWKWENVLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML
RACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSRFAGVR

Cmc04g0093471 (gene) of Melon (Charmono) v1.1 genome