| GenBank top hits | e value | %identity | Alignment |
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| KAA0052755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.4e-86 | 93.57 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
MNDNEVWDLV+L K+SKRVGCKWVFK KRD NGNIER KARLVAKGYTQKDGIDYKET SPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
FMDQPEGFMV+GKEHM+CKLKRSIYGLKQASRQWYLKFNDTIT FGF+ENIVDRCIYLKISGSKFIILVLY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| KAA0061857.1 copia-like pol polyprotein [Cucumis melo var. makuwa] | 3.6e-80 | 90.18 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
MNDNEVWDLV+L KESKRVGCKWVF+ KRD NGNIERYKARLVAKGYTQKDGIDYKET SPVSKKDSLRIIMAL+AHYDL++HQMDVK AFLNGNLDEEV
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGS
FMDQPEGFMV+GKEHM+CKLK SIYGLKQASRQWYLKFNDTI FGF+ENIVDRCIYLKISGS
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGS
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| PRQ52817.1 putative RNA-directed DNA polymerase [Rosa chinensis] | 1.3e-77 | 83.04 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
M+ N+VW+LV+L + KRVGCKWVFK KRD NGNIERYKARLVAKG+TQK+GIDYKET SPVSKKDSLRIIMALVAH+DLELHQMDVKTAFLNGNL+EEV
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
FM+QPEGF GKEHM+CKLK+SIYGLKQASRQWYLKFNDT+ FGF+ENIVDRCIYLK+SGSKFI L+LY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| TYK00088.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.6e-86 | 92.4 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
MND+EVWDLV+L KESKRVGCKWVFK KRD NGNIERYKARLVAKGYTQKDGIDYKET SPVSKKDSLRIIMALVAHYDLELHQMDVKTAF+NGNLDE++
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
FMDQPEGFMV+GKEHM+CKLKRSIYGLKQASRQWYLKFNDTIT FGF+ENIVDRCIYLKISGSKFIILVLY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| TYK04201.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.4e-86 | 93.57 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
MNDNEVWDLV+L K+SKRVGCKWVFK KRD NGNIER KARLVAKGYTQKDGIDYKET SPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
FMDQPEGFMV+GKEHM+CKLKRSIYGLKQASRQWYLKFNDTIT FGF+ENIVDRCIYLKISGSKFIILVLY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2P6S2B9 Putative RNA-directed DNA polymerase | 6.3e-78 | 83.04 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
M+ N+VW+LV+L + KRVGCKWVFK KRD NGNIERYKARLVAKG+TQK+GIDYKET SPVSKKDSLRIIMALVAH+DLELHQMDVKTAFLNGNL+EEV
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
FM+QPEGF GKEHM+CKLK+SIYGLKQASRQWYLKFNDT+ FGF+ENIVDRCIYLK+SGSKFI L+LY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| A0A5A7UG95 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-86 | 93.57 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
MNDNEVWDLV+L K+SKRVGCKWVFK KRD NGNIER KARLVAKGYTQKDGIDYKET SPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
FMDQPEGFMV+GKEHM+CKLKRSIYGLKQASRQWYLKFNDTIT FGF+ENIVDRCIYLKISGSKFIILVLY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| A0A5A7V4M3 Copia-like pol polyprotein | 1.8e-80 | 90.18 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
MNDNEVWDLV+L KESKRVGCKWVF+ KRD NGNIERYKARLVAKGYTQKDGIDYKET SPVSKKDSLRIIMAL+AHYDL++HQMDVK AFLNGNLDEEV
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGS
FMDQPEGFMV+GKEHM+CKLK SIYGLKQASRQWYLKFNDTI FGF+ENIVDRCIYLKISGS
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGS
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| A0A5D3BLU0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-86 | 92.4 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
MND+EVWDLV+L KESKRVGCKWVFK KRD NGNIERYKARLVAKGYTQKDGIDYKET SPVSKKDSLRIIMALVAHYDLELHQMDVKTAF+NGNLDE++
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
FMDQPEGFMV+GKEHM+CKLKRSIYGLKQASRQWYLKFNDTIT FGF+ENIVDRCIYLKISGSKFIILVLY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| A0A5D3BWW5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-86 | 93.57 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
MNDNEVWDLV+L K+SKRVGCKWVFK KRD NGNIER KARLVAKGYTQKDGIDYKET SPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
FMDQPEGFMV+GKEHM+CKLKRSIYGLKQASRQWYLKFNDTIT FGF+ENIVDRCIYLKISGSKFIILVLY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.2e-35 | 45.88 | Show/hide |
Query: NEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFMD
N W + K + V +WVF K + GN RYKARLVA+G+TQK IDY+ET +PV++ S R I++LV Y+L++HQMDVKTAFLNG L EE++M
Subjt: NEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFMD
Query: QPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISG--SKFIILVLY
P+G + +CKL ++IYGLKQA+R W+ F + F + VDRCIY+ G ++ I ++LY
Subjt: QPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISG--SKFIILVLY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-45 | 52.33 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
+ N + LV+L K + + CKWVFK K+D + + RYKARLV KG+ QK GID+ E SPV K S+R I++L A DLE+ Q+DVKTAFL+G+L+EE+
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEV
Query: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLK-ISGSKFIILVLY
+M+QPEGF V GK+HM+CKL +S+YGLKQA RQWY+KF+ + + + D C+Y K S + FIIL+LY
Subjt: FMDQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLK-ISGSKFIILVLY
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 1.4e-10 | 44.44 | Show/hide |
Query: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIM
++ N+ W LV +GCKWVFK K +G ++R KARLVAKG+ Q++GI + ET SPV + ++R I+
Subjt: MNDNEVWDLVKLSKESKRVGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.2e-35 | 39.64 | Show/hide |
Query: NEVWDLVKLSKESKR-VGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFM
N WDLV VGC+W+F K + +G++ RYKARLVAKGY Q+ G+DY ET SPV K S+RI++ + + Q+DV AFL G L ++V+M
Subjt: NEVWDLVKLSKESKR-VGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFM
Query: DQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
QP GF+ + + +CKL++++YGLKQA R WY++ + + GF ++ D +++ G + +++Y
Subjt: DQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.3e-35 | 42.01 | Show/hide |
Query: NEVWDLVKLSKESKR-VGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFM
N WDLV S VGC+W+F K + +G++ RYKARLVAKGY Q+ G+DY ET SPV K S+RI++ + + Q+DV AFL G L +EV+M
Subjt: NEVWDLVKLSKESKR-VGCKWVFKAKRDINGNIERYKARLVAKGYTQKDGIDYKETLSPVSKKDSLRIIMALVAHYDLELHQMDVKTAFLNGNLDEEVFM
Query: DQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
QP GF+ + +C+L+++IYGLKQA R WY++ + GF +I D +++ G I +++Y
Subjt: DQPEGFMVDGKEHMMCKLKRSIYGLKQASRQWYLKFNDTITYFGFEENIVDRCIYLKISGSKFIILVLY
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