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Cmc04g0093581 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093581
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionAP complex subunit sigma
Genome locationCMiso1.1chr04:5928338..5928773
RNA-Seq ExpressionCmc04g0093581
SyntenyCmc04g0093581
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006896 - Golgi to vacuole transport (biological process)
GO:0030123 - AP-3 adaptor complex (cellular component)
GO:0030659 - cytoplasmic vesicle membrane (cellular component)
InterPro domainsIPR011012 - Longin-like domain superfamily
IPR016635 - Adaptor protein complex, sigma subunit
IPR022775 - AP complex, mu/sigma subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050601.1 AP-3 complex subunit sigma [Cucumis melo var. makuwa]2.1e-2091.38Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS
        MI SVIVMN+E KPRFAKFYDFQPIEKQQELIRSVYGVLCS+ ENISNFVEAESIFGS
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS

KAA0058373.1 AP-3 complex subunit sigma [Cucumis melo var. makuwa]3.3e-2194.83Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS
        MI SVIVMNTE KPRFAKFYDFQPIEKQQELIRSVYGVLCSR ENISNFVEAESIFGS
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS

XP_008452384.1 PREDICTED: AP-3 complex subunit sigma [Cucumis melo]3.3e-2194.83Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS
        MI SVIVMNTE KPRFAKFYDFQPIEKQQELIRSVYGVLCSR ENISNFVEAESIFGS
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS

XP_011655957.1 AP-3 complex subunit sigma [Cucumis sativus]3.6e-2091.23Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI SVIVMNTE KPRFAKFYDFQPIEKQQELIRSVYGVLCSR EN+SNFVE ESIFG
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

XP_038893159.1 AP-3 complex subunit sigma [Benincasa hispida]3.1e-1985.96Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +VIVMNT+ KPRFAKFY+FQP+EKQQELIRSVYGVLCSR EN+SNFVEAESIFG
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

TrEMBL top hitse value%identityAlignment
A0A1S3BT37 AP complex subunit sigma1.6e-2194.83Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS
        MI SVIVMNTE KPRFAKFYDFQPIEKQQELIRSVYGVLCSR ENISNFVEAESIFGS
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS

A0A5A7UR76 AP-3 complex subunit sigma1.6e-2194.83Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS
        MI SVIVMNTE KPRFAKFYDFQPIEKQQELIRSVYGVLCSR ENISNFVEAESIFGS
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS

A0A5D3C931 AP-3 complex subunit sigma1.0e-2091.38Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS
        MI SVIVMN+E KPRFAKFYDFQPIEKQQELIRSVYGVLCS+ ENISNFVEAESIFGS
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGS

A0A6J1IUE1 AP complex subunit sigma1.5e-1985.96Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +VIVMNT+ KPRFAKFYDFQP+EKQQELIRSV+GVLCSR EN+SNFVEAESIFG
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

A0A6J1KSX1 AP-3 complex subunit sigma-like1.9e-1987.72Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +VIVMNT+ KPRFAKFYDFQPIEKQ ELIRSVYGVLCSR EN+SNFVEAESIFG
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

SwissProt top hitse value%identityAlignment
P59780 AP-3 complex subunit sigma-21.8e-0638.6Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +++V N   KPR  +FY   P E QQ+++R  + ++  R +NI NF+E  S+ G
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

Q1JQA3 AP-3 complex subunit sigma-21.8e-0638.6Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +++V N   KPR  +FY   P E QQ+++R  + ++  R +NI NF+E  S+ G
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

Q5RDP9 AP-3 complex subunit sigma-21.8e-0638.6Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +++V N   KPR  +FY   P E QQ+++R  + ++  R +NI NF+E  S+ G
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

Q8BSZ2 AP-3 complex subunit sigma-21.8e-0638.6Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +++V N   KPR  +FY   P E QQ+++R  + ++  R +NI NF+E  S+ G
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

Q8VZ37 AP-3 complex subunit sigma3.9e-1768.42Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +V++MNT+ KPR AKFYD+ P+EKQQELIR V+ VLCSR EN+SNF+E ES+FG
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG

Arabidopsis top hitse value%identityAlignment
AT3G50860.1 Clathrin adaptor complex small chain family protein2.8e-1868.42Show/hide
Query:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG
        MI +V++MNT+ KPR AKFYD+ P+EKQQELIR V+ VLCSR EN+SNF+E ES+FG
Subjt:  MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATGGTCGGTGATAGTGATGAATACTGAAAGCAAGCCTCGGTTTGCTAAGTTCTACGATTTTCAGCCCATAGAGAAGCAACAGGAGCTCATTCGCAGCGTCTATGG
AGTACTTTGCAGTCGAGGTGAGAACATCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTTCGGTAATATTTCCTTGTCCAATAATTTCCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGATATGGTCGGTGATAGTGATGAATACTGAAAGCAAGCCTCGGTTTGCTAAGTTCTACGATTTTCAGCCCATAGAGAAGCAACAGGAGCTCATTCGCAGCGTCTATGG
AGTACTTTGCAGTCGAGGTGAGAACATCAGCAATTTCGTGGAGGCTGAGTCCATCTTCGGTTCGGTAATATTTCCTTGTCCAATAATTTCCTTATAG
Protein sequenceShow/hide protein sequence
MIWSVIVMNTESKPRFAKFYDFQPIEKQQELIRSVYGVLCSRGENISNFVEAESIFGSVIFPCPIISL