; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0093651 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0093651
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationCMiso1.1chr04:5967856..5968746
RNA-Seq ExpressionCmc04g0093651
SyntenyCmc04g0093651
Gene Ontology termsNA
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045109.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.5e-8271.82Show/hide
Query:  MGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYV
        MG+ +K LN LI +LN++FA+KDLG LSYFL VEVSYPTNGG+FLSQ+K+I+DLL  TKM + KPISTPM+SG L+SA QGE FHD+ LYR  VGALQY 
Subjt:  MGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYV

Query:  TLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTE
        TLTHP ISY VNKACQFMH+PK  HWQLVKRILRYLKG L HGLWL  S N+SLVGF DADWASD DDRKST G+CVYFGNNLVS GSKKQ II RSSTE
Subjt:  TLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTE

Query:  VEY--VALLFWQSNWYGFVL
         EY  +ALL  +  W   +L
Subjt:  VEY--VALLFWQSNWYGFVL

KAA0052371.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.4e-12981.21Show/hide
Query:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD
        MEQ FGF EVKSSYPMVCHLKKA YGLKQAPRAWYE L+  LHSLGFRTSK DTSLL+ VTPTS  Y LIYVDDLIIMGS +KD+NSL+HSLN+QFA+KD
Subjt:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD

Query:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN
        LGKLSYFL VEVSYPTNG LFLSQSK+I+DLL  TKML+ KPISTPM+SG LLSAFQGEPFHDV L RSVVGALQY TLTHP ISY VNKACQFMHTPK+
Subjt:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN

Query:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEY--VALLFWQSNWYGFVLS
        THWQLVKRILRYLKGVLYHGLWLSKSDN SLVGF DADWASD DDRKST G CVYFGNNLVS GSKKQ IISRSSTE EY  +ALL  +  W   +L+
Subjt:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEY--VALLFWQSNWYGFVLS

KAA0057506.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.1e-8169.6Show/hide
Query:  YVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSV
        YVDDLIIMG  +K LN LI +LN++FA+KDLG LSYFL VEVSYPTN G+ LSQ+K+I+DLL   KM + KPISTPM+SG L+SA  GE FHD+ LYRS 
Subjt:  YVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSV

Query:  VGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFI
        V ALQY TLTHP ISY VNKACQFMH+PK  HWQLVKRILRYLKG L HGLWL  S N+S+VGF + DWASD DDRKS +G+CVYFGNNLVS GSKKQ I
Subjt:  VGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFI

Query:  ISRSSTEVEY--VALLFWQSNWYGFVL
        ISRSST++EY  +ALL  +S W   +L
Subjt:  ISRSSTEVEY--VALLFWQSNWYGFVL

RVX14937.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.5e-8154.36Show/hide
Query:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD
        M+QP GF + K+   +VC L KA YGLKQAPRAW+EKL+ +L S GF ++K+D SL +  TP+   Y L+YVDD++++GS    + SLI  LN++F++KD
Subjt:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD

Query:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN
        LG++ YFL ++VS+ TN GL LSQ+K+I DLL  TKM+  KP  TP+ +G  L A  G+P  D+  YRS VGALQYVT+T P +S+ VNK CQFM  P  
Subjt:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN

Query:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVAL--LFWQSNWYGFVLS
         HW+ VKRILRYL+G L HGL L KS N+ L+GF DADWASD DDR+ST G CV+ G NL+S  SKKQ  +SRSSTE EY +L  L  +  W   +LS
Subjt:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVAL--LFWQSNWYGFVLS

XP_016903397.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]5.0e-9081.07Show/hide
Query:  MGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYV
        MG+ +K +NSL+HSLN+QFA+KDLGKLSYFL VEVSYPTNGGLFLSQSK+I+DLL  TKML+ KPIST M+SG LLSAFQGE FHDV LYRS+VGALQY 
Subjt:  MGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYV

Query:  TLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTE
        TLTHP ISY VNKACQF+HTPK+THWQLVK+ILRYLKGVLYH LWLSKSDNMSL GF DADWASD DDRKST GFCVYFGNNLVS GSKKQ II RSST+
Subjt:  TLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTE

Query:  VEYVAL
         EY  L
Subjt:  VEYVAL

TrEMBL top hitse value%identityAlignment
A0A1S4E598 uncharacterized mitochondrial protein AtMg00810-like2.4e-9081.07Show/hide
Query:  MGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYV
        MG+ +K +NSL+HSLN+QFA+KDLGKLSYFL VEVSYPTNGGLFLSQSK+I+DLL  TKML+ KPIST M+SG LLSAFQGE FHDV LYRS+VGALQY 
Subjt:  MGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYV

Query:  TLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTE
        TLTHP ISY VNKACQF+HTPK+THWQLVK+ILRYLKGVLYH LWLSKSDNMSL GF DADWASD DDRKST GFCVYFGNNLVS GSKKQ II RSST+
Subjt:  TLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTE

Query:  VEYVAL
         EY  L
Subjt:  VEYVAL

A0A438K147 Retrovirus-related Pol polyprotein from transposon TNT 1-947.0e-8254.36Show/hide
Query:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD
        M+QP GF + K+   +VC L KA YGLKQAPRAW+EKL+ +L S GF ++K+D SL +  TP+   Y L+YVDD++++GS    + SLI  LN++F++KD
Subjt:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD

Query:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN
        LG++ YFL ++VS+ TN GL LSQ+K+I DLL  TKM+  KP  TP+ +G  L A  G+P  D+  YRS VGALQYVT+T P +S+ VNK CQFM  P  
Subjt:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN

Query:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVAL--LFWQSNWYGFVLS
         HW+ VKRILRYL+G L HGL L KS N+ L+GF DADWASD DDR+ST G CV+ G NL+S  SKKQ  +SRSSTE EY +L  L  +  W   +LS
Subjt:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVAL--LFWQSNWYGFVLS

A0A5A7UFS3 Putative mitochondrial protein1.2e-12981.21Show/hide
Query:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD
        MEQ FGF EVKSSYPMVCHLKKA YGLKQAPRAWYE L+  LHSLGFRTSK DTSLL+ VTPTS  Y LIYVDDLIIMGS +KD+NSL+HSLN+QFA+KD
Subjt:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD

Query:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN
        LGKLSYFL VEVSYPTNG LFLSQSK+I+DLL  TKML+ KPISTPM+SG LLSAFQGEPFHDV L RSVVGALQY TLTHP ISY VNKACQFMHTPK+
Subjt:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN

Query:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEY--VALLFWQSNWYGFVLS
        THWQLVKRILRYLKGVLYHGLWLSKSDN SLVGF DADWASD DDRKST G CVYFGNNLVS GSKKQ IISRSSTE EY  +ALL  +  W   +L+
Subjt:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEY--VALLFWQSNWYGFVLS

A0A5A7UTP6 Putative mitochondrial protein5.4e-8269.6Show/hide
Query:  YVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSV
        YVDDLIIMG  +K LN LI +LN++FA+KDLG LSYFL VEVSYPTN G+ LSQ+K+I+DLL   KM + KPISTPM+SG L+SA  GE FHD+ LYRS 
Subjt:  YVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSV

Query:  VGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFI
        V ALQY TLTHP ISY VNKACQFMH+PK  HWQLVKRILRYLKG L HGLWL  S N+S+VGF + DWASD DDRKS +G+CVYFGNNLVS GSKKQ I
Subjt:  VGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFI

Query:  ISRSSTEVEY--VALLFWQSNWYGFVL
        ISRSST++EY  +ALL  +S W   +L
Subjt:  ISRSSTEVEY--VALLFWQSNWYGFVL

A0A5D3DK36 Putative mitochondrial protein4.1e-8271.82Show/hide
Query:  MGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYV
        MG+ +K LN LI +LN++FA+KDLG LSYFL VEVSYPTNGG+FLSQ+K+I+DLL  TKM + KPISTPM+SG L+SA QGE FHD+ LYR  VGALQY 
Subjt:  MGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYV

Query:  TLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTE
        TLTHP ISY VNKACQFMH+PK  HWQLVKRILRYLKG L HGLWL  S N+SLVGF DADWASD DDRKST G+CVYFGNNLVS GSKKQ II RSSTE
Subjt:  TLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTE

Query:  VEY--VALLFWQSNWYGFVL
         EY  +ALL  +  W   +L
Subjt:  VEY--VALLFWQSNWYGFVL

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.1e-3031.25Show/hide
Query:  VCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMC--VTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSY
        VC L KA YGLKQA R W+E    +L    F  S  D  + +          Y L+YVDD++I       +N+    L  +F + DL ++ +F+ + +  
Subjt:  VCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMC--VTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSY

Query:  PTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTL-THPHISYIVNKACQFMHTPKNTHWQLVKRILRYL
          +  ++LSQS ++  +L    M     +STP+ S         +   +    RS++G L Y+ L T P ++  VN   ++     +  WQ +KR+LRYL
Subjt:  PTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTL-THPHISYIVNKACQFMHTPKNTHWQLVKRILRYL

Query:  KGVLYHGLWLSK--SDNMSLVGFYDADWASDADDRKSTYGFCV-YFGNNLVSLGSKKQFIISRSSTEVEYVALL--FWQSNWYGFVLS
        KG +   L   K  +    ++G+ D+DWA    DRKST G+    F  NL+   +K+Q  ++ SSTE EY+AL     ++ W  F+L+
Subjt:  KGVLYHGLWLSK--SDNMSLVGFYDADWASDADDRKSTYGFCV-YFGNNLVSLGSKKQFIISRSSTEVEYVALL--FWQSNWYGFVLS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-3836.77Show/hide
Query:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSL-LMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVK
        MEQP GF EV     MVC L K+ YGLKQAPR WY K +S + S  +  + +D  +     +  ++   L+YVDD++I+G  +  +  L   L+  F +K
Subjt:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSL-LMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVK

Query:  DLGKLSYFLRVE-VSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPM-----ISGSLLSAFQGEPFHDVRL-YRSVVGALQY-VTLTHPHISYIVNKA
        DLG     L ++ V   T+  L+LSQ K+I  +L    M   KP+STP+     +S  +      E  +  ++ Y S VG+L Y +  T P I++ V   
Subjt:  DLGKLSYFLRVE-VSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPM-----ISGSLLSAFQGEPFHDVRL-YRSVVGALQY-VTLTHPHISYIVNKA

Query:  CQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVA
         +F+  P   HW+ VK ILRYL+G     L    SD + L G+ DAD A D D+RKS+ G+   F    +S  SK Q  ++ S+TE EY+A
Subjt:  CQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVA

P92519 Uncharacterized mitochondrial protein AtMg008102.2e-4845.87Show/hide
Query:  YFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEV-SYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVR
        Y L+YVDD+++ GS    LN LI  L++ F++KDLG + YFL +++ ++P+  GLFLSQ+K+   +L    ML+ KP+STP +   L S+     + D  
Subjt:  YFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEV-SYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVR

Query:  LYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGS
         +RS+VGALQY+TLT P ISY VN  CQ MH P    + L+KR+LRY+KG ++HGL++ K+  +++  F D+DWA     R+ST GFC + G N++S  +
Subjt:  LYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGS

Query:  KKQFIISRSSTEVEYVAL
        K+Q  +SRSSTE EY AL
Subjt:  KKQFIISRSSTEVEYVAL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.4e-6347.69Show/hide
Query:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD
        M QP GF + K     VC L+KA YGLKQAPRAWY +L + L ++GF  S +DTSL +     S  Y L+YVDD++I G+    L++ + +L+ +F+VKD
Subjt:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD

Query:  LGKLSYFLRVEVS-YPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPK
          +L YFL +E    PT  GL LSQ ++I DLL  T M+  KP++TPM     LS + G    D   YR +VG+LQY+  T P ISY VN+  QFMH P 
Subjt:  LGKLSYFLRVEVS-YPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPK

Query:  NTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEY
          H Q +KRILRYL G   HG++L K + +SL  + DADWA D DD  ST G+ VY G++ +S  SKKQ  + RSSTE EY
Subjt:  NTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEY

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.3e-6145.36Show/hide
Query:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD
        M QP GF + K     VC L+KA YGLKQAPRAWY +L + L ++GF  S +DTSL +     S  Y L+YVDD++I G+    L   + +L+ +F+VK+
Subjt:  MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKD

Query:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN
           L YFL +E       GL LSQ ++  DLL  T ML  KP++TPM +   L+   G    D   YR +VG+LQY+  T P +SY VN+  Q+MH P +
Subjt:  LGKLSYFLRVEVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKN

Query:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEY
         HW  +KR+LRYL G   HG++L K + +SL  + DADWA D DD  ST G+ VY G++ +S  SKKQ  + RSSTE EY
Subjt:  THWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEY

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 89.8e-5240.89Show/hide
Query:  VCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPT
        VC+LKK+ YGLKQA R W+ K + +L   GF  S +D +  + +T T +   L+YVDD+II  + +  ++ L   L + F ++DLG L YFL +E++  +
Subjt:  VCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEVSYPT

Query:  NGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGV
          G+ + Q K+  DLL  T +L  KP S PM      SA  G  F D + YR ++G L Y+ +T   IS+ VNK  QF   P+  H Q V +IL Y+KG 
Subjt:  NGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGV

Query:  LYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVALLF
        +  GL+ S    M L  F DA + S  D R+ST G+C++ G +L+S  SKKQ ++S+SS E EY AL F
Subjt:  LYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVALLF

ATMG00240.1 Gag-Pol-related retrotransposon family protein7.6e-1238.46Show/hide
Query:  YVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFC
        Y+T+T P +++ VN+  QF    +    Q V ++L Y+KG +  GL+ S + ++ L  F D+DWAS  D R+S  GFC
Subjt:  YVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.6e-4945.87Show/hide
Query:  YFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEV-SYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVR
        Y L+YVDD+++ GS    LN LI  L++ F++KDLG + YFL +++ ++P+  GLFLSQ+K+   +L    ML+ KP+STP +   L S+     + D  
Subjt:  YFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRVEV-SYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVR

Query:  LYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGS
         +RS+VGALQY+TLT P ISY VN  CQ MH P    + L+KR+LRY+KG ++HGL++ K+  +++  F D+DWA     R+ST GFC + G N++S  +
Subjt:  LYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHGLWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGS

Query:  KKQFIISRSSTEVEYVAL
        K+Q  +SRSSTE EY AL
Subjt:  KKQFIISRSSTEVEYVAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAACCATTTGGTTTTGAAGAAGTCAAAAGCTCTTATCCTATGGTTTGTCATTTGAAAAAGGCTTTTTATGGTCTTAAACAAGCCCCTCGAGCATGGTATGAAAA
GTTGAACTCAAGTTTACATTCCCTTGGATTTAGAACTTCCAAGACTGATACTTCTTTATTAATGTGTGTTACTCCTACATCTTATTACTATTTCTTGATTTATGTTGATG
ATTTGATTATTATGGGCAGCTTTGAGAAAGATTTGAATTCTTTAATTCATTCTTTAAACAATCAATTTGCAGTTAAGGATTTGGGAAAGCTGAGCTACTTTCTTCGAGTT
GAGGTGTCATATCCAACTAATGGAGGTTTGTTCTTATCTCAATCAAAGCATATTAGTGATCTGTTACCGATAACAAAAATGTTGGAAGTTAAACCTATCTCTACACCTAT
GATAAGTGGTTCTTTACTTTCTGCTTTTCAAGGGGAACCATTTCATGATGTGCGTCTGTATAGAAGTGTTGTTGGTGCATTACAGTATGTCACACTTACTCATCCTCATA
TATCATATATTGTTAATAAAGCTTGTCAATTTATGCATACTCCAAAAAATACACATTGGCAACTTGTGAAAAGAATTCTAAGATATCTTAAAGGTGTACTATATCATGGT
TTATGGCTTAGCAAGTCTGATAATATGTCTTTAGTTGGTTTTTATGATGCGGATTGGGCTTCTGATGCAGATGATAGAAAATCTACTTATGGTTTTTGTGTTTATTTTGG
AAATAACTTAGTGTCTTTGGGTTCCAAGAAACAGTTTATTATTTCCAGGTCTAGTACTGAAGTCGAATATGTTGCACTGCTCTTTTGGCAATCAAATTGGTATGGATTTG
TTCTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAACCATTTGGTTTTGAAGAAGTCAAAAGCTCTTATCCTATGGTTTGTCATTTGAAAAAGGCTTTTTATGGTCTTAAACAAGCCCCTCGAGCATGGTATGAAAA
GTTGAACTCAAGTTTACATTCCCTTGGATTTAGAACTTCCAAGACTGATACTTCTTTATTAATGTGTGTTACTCCTACATCTTATTACTATTTCTTGATTTATGTTGATG
ATTTGATTATTATGGGCAGCTTTGAGAAAGATTTGAATTCTTTAATTCATTCTTTAAACAATCAATTTGCAGTTAAGGATTTGGGAAAGCTGAGCTACTTTCTTCGAGTT
GAGGTGTCATATCCAACTAATGGAGGTTTGTTCTTATCTCAATCAAAGCATATTAGTGATCTGTTACCGATAACAAAAATGTTGGAAGTTAAACCTATCTCTACACCTAT
GATAAGTGGTTCTTTACTTTCTGCTTTTCAAGGGGAACCATTTCATGATGTGCGTCTGTATAGAAGTGTTGTTGGTGCATTACAGTATGTCACACTTACTCATCCTCATA
TATCATATATTGTTAATAAAGCTTGTCAATTTATGCATACTCCAAAAAATACACATTGGCAACTTGTGAAAAGAATTCTAAGATATCTTAAAGGTGTACTATATCATGGT
TTATGGCTTAGCAAGTCTGATAATATGTCTTTAGTTGGTTTTTATGATGCGGATTGGGCTTCTGATGCAGATGATAGAAAATCTACTTATGGTTTTTGTGTTTATTTTGG
AAATAACTTAGTGTCTTTGGGTTCCAAGAAACAGTTTATTATTTCCAGGTCTAGTACTGAAGTCGAATATGTTGCACTGCTCTTTTGGCAATCAAATTGGTATGGATTTG
TTCTTTCTTGA
Protein sequenceShow/hide protein sequence
MEQPFGFEEVKSSYPMVCHLKKAFYGLKQAPRAWYEKLNSSLHSLGFRTSKTDTSLLMCVTPTSYYYFLIYVDDLIIMGSFEKDLNSLIHSLNNQFAVKDLGKLSYFLRV
EVSYPTNGGLFLSQSKHISDLLPITKMLEVKPISTPMISGSLLSAFQGEPFHDVRLYRSVVGALQYVTLTHPHISYIVNKACQFMHTPKNTHWQLVKRILRYLKGVLYHG
LWLSKSDNMSLVGFYDADWASDADDRKSTYGFCVYFGNNLVSLGSKKQFIISRSSTEVEYVALLFWQSNWYGFVLS